Click here to switch to the map view.

The map label for this gene is 189423911

Identifier: 189423911

GI number: 189423911

Start: 869696

End: 870856

Strand: Reverse

Name: 189423911

Synonym: Glov_0844

Alternate gene names: NA

Gene position: 870856-869696 (Counterclockwise)

Preceding gene: 189423912

Following gene: 189423910

Centisome position: 22.23

GC content: 47.37

Gene sequence:

>1161_bases
ATGAGTAGTAACCCTATAAAGCCCGGCTGGCAGAAGGTCAAATTCGGGGATGTCGTGCGCCTTTCGAAAGAGCGCAGCAG
CGATCCGCTTGCCGATGGTTATGAGCGGTACATCGGTCTGGAGCACATTGACCCGGAGGACTTGCGCGTCCGGCGCTGGG
GCAATGTTGCCGATGGTGTCACCTTTACCAGCGTGTTCAAGCCGGGACAGGTTCTGTTCGGCAAACGTCGGGCATATCAA
CGCAAGGTAGCGGTGGCCGATTTTGCCGGAGTCTGTTCAGGCGACATTTATGTGCTGGAGAGCAAAGACCCGAAGAAACT
CCTTCCGGAACTACTGCCGTTCATCTGCCAGACTGAAGCATTCTTTCAGCATGCAGTCGGGACATCGGCAGGCAGCCTGA
GTCCGCGAACCAACTGGACAAGTCTTGCTGATTTTGAGTTTGCGCTGCCGCCGTTGGAGGAGCAGCGGCGGATTGTCGAG
TTACTTCTGGCTGTTGAGGAAACGATAGATAACCTTGTCAGCGCAAGATCATCTGCTCAGCTATTATTCAAAGCAGCTTT
GTTGGAAAGCTTCAATAGCCTCCCTGAAAACAACAAAAAAAAGATCGCTGATTGTTATGAAATTCAGCTTGGGAAAATGA
GCTCGGAAAAAGCTCGTTTTGGTTCCAATCAAAAAACCTATATAAAAAACAATAATGTGCTTTGGGGGAAATTTGACTTT
GGCGAATTGCCTCAAATGTCATTTGATGAACGAGAAATCACAAAATATGAACTGAGAAAGGGAGACCTTCTTGTATGTGA
AGGCGGTGAAATAGGCCGTGCAGCCATTTGGCAAGATGAAATCCCTGGGATGTTGTATCAAAAGGCATTGCACAGGCTGA
GGCCACGAACATCTGATGATATCCCGGAATTTATGTTTCATTATCTTCGCTATTGTGCAGAGAGAGGTATTTTAGACGGA
GTTGCCACAGGAACAACTATTCGACATCTCCCTGTAGAACAACTTAGTCAACTTGCTCTACCATTTCCCAAGCGAGCTGT
TCAGGAGCAGGTGGCAAGTTTACTTTCAAAAATTGAATCAGGAAATTCAATGCTTGACGCCAAGATATGTCATTCAAGAA
GTCTAAAATCTGCGGTGTTACGTCAGATTGCAGGAGGATAA

Upstream 100 bases:

>100_bases
TTGGGATGGTGGACTATCGCCCCTGACGGTGCCGAGAGCCTGAGTGATTTTGCTGACTGGATGAGAAAGTTGGCTTTACC
TGACGAGGAAGAATCTGACG

Downstream 100 bases:

>100_bases
CTTGTTCACCGAATCCAACACCGTCGAAGCCTACCTCCGCGACCTGCTGACTGGTTCTGTCATAGATACTACACAAGGTG
TAGTCAGTGAACCGGAGCCG

Product: restriction endonuclease S subunits-like protein

Products: NA

Alternate protein names: Restriction System DNA Specificity Domain Protein; Restriction System DNA Specificity Domain; Type I Restriction- System Endonuclease S Subunit; Restriction Endonuclease S Subunits-Like; Type I Restriction- System S Subunit; Restriction System Type I; Type I Restriction- System Specificity Subunit; Type I Restriction Ecocificity Protein; EcoKI Restriction- System Protein HsdS; Restriction Endonuclease S Subunits-Like Protein; Polypeptide HsdS; Type I Restriction System Specificity Subunit; Type I Restriction- Specificity Protein; Type I Restriction Protein Fragment; Type I Restriction- Subunit S; Type I Restriction- System Specificity Determinant; Type I Restriction- S Subunit; Type I Restriction- System DNA Specificity Subunit; Restriction Endonuclease S Subunit; Restriction Endonuclease S Subunit-Like Protein; Type I Site-Specific Deoxyribonuclease

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MSSNPIKPGWQKVKFGDVVRLSKERSSDPLADGYERYIGLEHIDPEDLRVRRWGNVADGVTFTSVFKPGQVLFGKRRAYQ
RKVAVADFAGVCSGDIYVLESKDPKKLLPELLPFICQTEAFFQHAVGTSAGSLSPRTNWTSLADFEFALPPLEEQRRIVE
LLLAVEETIDNLVSARSSAQLLFKAALLESFNSLPENNKKKIADCYEIQLGKMSSEKARFGSNQKTYIKNNNVLWGKFDF
GELPQMSFDEREITKYELRKGDLLVCEGGEIGRAAIWQDEIPGMLYQKALHRLRPRTSDDIPEFMFHYLRYCAERGILDG
VATGTTIRHLPVEQLSQLALPFPKRAVQEQVASLLSKIESGNSMLDAKICHSRSLKSAVLRQIAGG

Sequences:

>Translated_386_residues
MSSNPIKPGWQKVKFGDVVRLSKERSSDPLADGYERYIGLEHIDPEDLRVRRWGNVADGVTFTSVFKPGQVLFGKRRAYQ
RKVAVADFAGVCSGDIYVLESKDPKKLLPELLPFICQTEAFFQHAVGTSAGSLSPRTNWTSLADFEFALPPLEEQRRIVE
LLLAVEETIDNLVSARSSAQLLFKAALLESFNSLPENNKKKIADCYEIQLGKMSSEKARFGSNQKTYIKNNNVLWGKFDF
GELPQMSFDEREITKYELRKGDLLVCEGGEIGRAAIWQDEIPGMLYQKALHRLRPRTSDDIPEFMFHYLRYCAERGILDG
VATGTTIRHLPVEQLSQLALPFPKRAVQEQVASLLSKIESGNSMLDAKICHSRSLKSAVLRQIAGG
>Mature_385_residues
SSNPIKPGWQKVKFGDVVRLSKERSSDPLADGYERYIGLEHIDPEDLRVRRWGNVADGVTFTSVFKPGQVLFGKRRAYQR
KVAVADFAGVCSGDIYVLESKDPKKLLPELLPFICQTEAFFQHAVGTSAGSLSPRTNWTSLADFEFALPPLEEQRRIVEL
LLAVEETIDNLVSARSSAQLLFKAALLESFNSLPENNKKKIADCYEIQLGKMSSEKARFGSNQKTYIKNNNVLWGKFDFG
ELPQMSFDEREITKYELRKGDLLVCEGGEIGRAAIWQDEIPGMLYQKALHRLRPRTSDDIPEFMFHYLRYCAERGILDGV
ATGTTIRHLPVEQLSQLALPFPKRAVQEQVASLLSKIESGNSMLDAKICHSRSLKSAVLRQIAGG

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43376; Mature: 43245

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNPIKPGWQKVKFGDVVRLSKERSSDPLADGYERYIGLEHIDPEDLRVRRWGNVADGV
CCCCCCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCC
TFTSVFKPGQVLFGKRRAYQRKVAVADFAGVCSGDIYVLESKDPKKLLPELLPFICQTEA
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
FFQHAVGTSAGSLSPRTNWTSLADFEFALPPLEEQRRIVELLLAVEETIDNLVSARSSAQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFKAALLESFNSLPENNKKKIADCYEIQLGKMSSEKARFGSNQKTYIKNNNVLWGKFDF
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEECCCEEEEECCC
GELPQMSFDEREITKYELRKGDLLVCEGGEIGRAAIWQDEIPGMLYQKALHRLRPRTSDD
CCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCEEEHHCCCHHHHHHHHHHHCCCCCCC
IPEFMFHYLRYCAERGILDGVATGTTIRHLPVEQLSQLALPFPKRAVQEQVASLLSKIES
HHHHHHHHHHHHHHCCCCCHHHCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
GNSMLDAKICHSRSLKSAVLRQIAGG
CCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSNPIKPGWQKVKFGDVVRLSKERSSDPLADGYERYIGLEHIDPEDLRVRRWGNVADGV
CCCCCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCCC
TFTSVFKPGQVLFGKRRAYQRKVAVADFAGVCSGDIYVLESKDPKKLLPELLPFICQTEA
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
FFQHAVGTSAGSLSPRTNWTSLADFEFALPPLEEQRRIVELLLAVEETIDNLVSARSSAQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFKAALLESFNSLPENNKKKIADCYEIQLGKMSSEKARFGSNQKTYIKNNNVLWGKFDF
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEECCCEEEEECCC
GELPQMSFDEREITKYELRKGDLLVCEGGEIGRAAIWQDEIPGMLYQKALHRLRPRTSDD
CCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCEEEHHCCCHHHHHHHHHHHCCCCCCC
IPEFMFHYLRYCAERGILDGVATGTTIRHLPVEQLSQLALPFPKRAVQEQVASLLSKIES
HHHHHHHHHHHHHHCCCCCHHHCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
GNSMLDAKICHSRSLKSAVLRQIAGG
CCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA