| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423912
Identifier: 189423912
GI number: 189423912
Start: 870849
End: 871256
Strand: Reverse
Name: 189423912
Synonym: Glov_0845
Alternate gene names: NA
Gene position: 871256-870849 (Counterclockwise)
Preceding gene: 189423913
Following gene: 189423911
Centisome position: 22.24
GC content: 52.21
Gene sequence:
>408_bases ATGCCCGTGTCTGATCAAATTGAACTAGCCCGCCTGCGCATAACACCGAGTTGCGGTTTCATGCCGCTCTCAGTCCATTT GCTGAAGCTGGTGCAACGGGGTGATGCATATCATATCCAGGTGACTGAACAGCAGGGACCATCACGCAAACGCTGGCGAG TTACTGTTCCAGCCGATGAAGTAACTCAACAGCTTGATCTGCTGCGCCGGGCAACGCTACCAGCTTTTCCTGTCAGCCCT TTGGTTTGCGACGGCGAATATGTTGAACTGACCATTCACGGAGAGTTTTCTGATTTGACGTTGGGATGGTGGACTATCGC CCCTGACGGTGCCGAGAGCCTGAGTGATTTTGCTGACTGGATGAGAAAGTTGGCTTTACCTGACGAGGAAGAATCTGACG ATGAGTAG
Upstream 100 bases:
>100_bases GGAGGAACTGCTTGGACCGTTTTTTCAGAAAGTCTGGGAAGAATTTGCGCTACCTGGTGAATGGAGAACAGACACATGAG TTTCGGTATTGTGAGGCGCT
Downstream 100 bases:
>100_bases TAACCCTATAAAGCCCGGCTGGCAGAAGGTCAAATTCGGGGATGTCGTGCGCCTTTCGAAAGAGCGCAGCAGCGATCCGC TTGCCGATGGTTATGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MPVSDQIELARLRITPSCGFMPLSVHLLKLVQRGDAYHIQVTEQQGPSRKRWRVTVPADEVTQQLDLLRRATLPAFPVSP LVCDGEYVELTIHGEFSDLTLGWWTIAPDGAESLSDFADWMRKLALPDEEESDDE
Sequences:
>Translated_135_residues MPVSDQIELARLRITPSCGFMPLSVHLLKLVQRGDAYHIQVTEQQGPSRKRWRVTVPADEVTQQLDLLRRATLPAFPVSP LVCDGEYVELTIHGEFSDLTLGWWTIAPDGAESLSDFADWMRKLALPDEEESDDE >Mature_134_residues PVSDQIELARLRITPSCGFMPLSVHLLKLVQRGDAYHIQVTEQQGPSRKRWRVTVPADEVTQQLDLLRRATLPAFPVSPL VCDGEYVELTIHGEFSDLTLGWWTIAPDGAESLSDFADWMRKLALPDEEESDDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15261; Mature: 15130
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSDQIELARLRITPSCGFMPLSVHLLKLVQRGDAYHIQVTEQQGPSRKRWRVTVPADE CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCHHH VTQQLDLLRRATLPAFPVSPLVCDGEYVELTIHGEFSDLTLGWWTIAPDGAESLSDFADW HHHHHHHHHHHCCCCCCCCCEEECCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHH MRKLALPDEEESDDE HHHHCCCCCCCCCCC >Mature Secondary Structure PVSDQIELARLRITPSCGFMPLSVHLLKLVQRGDAYHIQVTEQQGPSRKRWRVTVPADE CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCHHH VTQQLDLLRRATLPAFPVSPLVCDGEYVELTIHGEFSDLTLGWWTIAPDGAESLSDFADW HHHHHHHHHHHCCCCCCCCCEEECCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHH MRKLALPDEEESDDE HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA