| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423896
Identifier: 189423896
GI number: 189423896
Start: 850848
End: 851345
Strand: Reverse
Name: 189423896
Synonym: Glov_0828
Alternate gene names: NA
Gene position: 851345-850848 (Counterclockwise)
Preceding gene: 189423897
Following gene: 189423894
Centisome position: 21.73
GC content: 49.2
Gene sequence:
>498_bases ATGGGAAAGGAATACTCAGTTCAAGAGGCCCTGAAACTTGCCATTAAGGCAGAAAAAGACAGCATGGACTTCTACGCCAG GGCAGCATCGGTGGCCAAGAATGAACGGGCAAAGAAGGTGCTGGAAATGCTGGCAGCAGAAGAGGCAACCCATGTAAAAC ACTTCTTTGATCACTACAAGGGGACTGAGTTTGGCGATCTACAGAGTTTTATGGCAACCCCGGTTGACACCAAGAACCCT ACCTACGTAAAGCTCGAAAAAGCGATCAGCGAAGACATGGGGGAGCAGAAAGCCATGGAGCTGGCCCTCATTGAAGAAAA GGAATGCATCGGCCAGTACACCCAGCTTGCTGCCGGAGTTGTTGATCCAATGGTCAAGGCGATTTTCGAGCGGGTGGTTA AGGAGACAGAAGGTCATTTCGCCTTGATAGAGGCAGAGTATGCCCATATCATGGGGATGGTAAACGATAGCGATGTTGAT ACGTATGTAAGAGAATAG
Upstream 100 bases:
>100_bases TGCCAACAGAGCAAAAATTTCATCCCCAGCACTTGCAGTATTCCAATTTGCGGGTATAACCCATCTCATCAGACCATCAC ATTCTAGGGAGGGAACAATC
Downstream 100 bases:
>100_bases CTTCAGGAAAGACAGCGCAACTAAAAAAAACGGCAGGGGAATTCACCCCCCTGCCGTTTTTCTGTTCCAACCGTCTGCAG CCGTTACATCAACTTTGCAA
Product: rubrerythrin
Products: NA
Alternate protein names: Ferritin-Like Domain-Containing Protein
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MGKEYSVQEALKLAIKAEKDSMDFYARAASVAKNERAKKVLEMLAAEEATHVKHFFDHYKGTEFGDLQSFMATPVDTKNP TYVKLEKAISEDMGEQKAMELALIEEKECIGQYTQLAAGVVDPMVKAIFERVVKETEGHFALIEAEYAHIMGMVNDSDVD TYVRE
Sequences:
>Translated_165_residues MGKEYSVQEALKLAIKAEKDSMDFYARAASVAKNERAKKVLEMLAAEEATHVKHFFDHYKGTEFGDLQSFMATPVDTKNP TYVKLEKAISEDMGEQKAMELALIEEKECIGQYTQLAAGVVDPMVKAIFERVVKETEGHFALIEAEYAHIMGMVNDSDVD TYVRE >Mature_164_residues GKEYSVQEALKLAIKAEKDSMDFYARAASVAKNERAKKVLEMLAAEEATHVKHFFDHYKGTEFGDLQSFMATPVDTKNPT YVKLEKAISEDMGEQKAMELALIEEKECIGQYTQLAAGVVDPMVKAIFERVVKETEGHFALIEAEYAHIMGMVNDSDVDT YVRE
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18564; Mature: 18433
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKEYSVQEALKLAIKAEKDSMDFYARAASVAKNERAKKVLEMLAAEEATHVKHFFDHYK CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTEFGDLQSFMATPVDTKNPTYVKLEKAISEDMGEQKAMELALIEEKECIGQYTQLAAGV CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDPMVKAIFERVVKETEGHFALIEAEYAHIMGMVNDSDVDTYVRE HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCHHHHHCC >Mature Secondary Structure GKEYSVQEALKLAIKAEKDSMDFYARAASVAKNERAKKVLEMLAAEEATHVKHFFDHYK CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTEFGDLQSFMATPVDTKNPTYVKLEKAISEDMGEQKAMELALIEEKECIGQYTQLAAGV CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDPMVKAIFERVVKETEGHFALIEAEYAHIMGMVNDSDVDTYVRE HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA