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The map label for this gene is ybgF [C]

Identifier: 189423894

GI number: 189423894

Start: 847712

End: 848527

Strand: Reverse

Name: ybgF [C]

Synonym: Glov_0826

Alternate gene names: 189423894

Gene position: 848527-847712 (Counterclockwise)

Preceding gene: 189423896

Following gene: 189423874

Centisome position: 21.66

GC content: 52.33

Gene sequence:

>816_bases
ATGAAACTAGTCTGGATTCTATCCGGCTGTCTGATGCTGGCGTTGACAGGGGGCTGTGCCTCAACAGGTTCTGTTGAAGC
GGTACGCCGTGATGTCGATGAAACCAAGAATCGCATTTATACCATTGAAAAAGATCTGGGTACGGCGAGGGAGGGAGAAA
AGACCTTCAAGTCTGATTTTGCAGCACTACGCAAGGGGGATGCCGACCTTCAGGCAAACCTGGACAGCCTTAAGACAGAC
CTCCAACTGATGGCCGGTAAACTTGATGACCAAGGGCTGGCCATCAAAAAGCCTGTCGAAGAACTGGCCCGCTACCGTGA
AGATTCAGACCGCCGGATCGTGGCGCTTGAAGACCGGATCGTCAAGTTGCAGGTCGCCGTGGACGAGCTGAACAAACGGA
TGAAAGAGTTTGCTCAAAACGGTTCCGCCCCCGGCAAAGAGGCAACAGCCGATGCCTTGTACCTGAAAGGGCTTGAGTCC
TTTAAGGGTGGTGACATGCCCAGCGCCCGTACCCAGCTGACCAGCTTTATCGAAAAAAACCCCGGCCATGACCTGGTACC
CAATGCCCGCTACTGGATCGGCGAGACCTATTATGGTGAAAAGAACTACGAACAGGCCATCCTTGAGTTCCAGGAAGTGG
TCAAGCAGTATCCCAAAAAAGAAAAGGCACCGGCTGCCATGCTGAAGCAGGCCTTGTCGTTTAAGGCGCTAAAAGACCTG
AAGAGCACTCAATACCTGTTAAAGCGGCTGATTGGCGATTATCCCAAGAGTGATGAGGCCAAAAAGGCCAGGGTGATATT
GAAGGAAGTGAAGTAG

Upstream 100 bases:

>100_bases
TGAAAAGTACACAACAGGCCAACGGCACGCTTGTCAACACAAGAGGCTGCATGGTATAAAGTTCAATCACACAATGTTAG
TCATCCACAGGGGGCACCTA

Downstream 100 bases:

>100_bases
AGTTCAAAACTGTTTGACACACAAAGAGGGGCAGTCCTGAACAGGCTGCCCCTCTTTGTGTGTACGGATCCGGCTAAAAA
ACTACAGAACCCCCTTGGTG

Product: tol-pal system protein YbgF

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; TPR Domain-Containing Protein; TPR Domain Protein; Transmembrane Protein; L-Pal Cell Envelope Complex Subunit YbgF; L-Pal System Protein Ybgf; Tetratricopeptide Domain-Containing Protein; L-Pal System YbgF; Lipoprotein; L-Pal System Protein; TPR Domain Family Protein; L System Periplasmic Component YbgF; Tetratricopeptide Repeat Family Protein; L-Pal Cell Envelope Complex Subunit YbgF Protein; TPR Repeat Exported Protein; L System Periplasmic Component; Aspartyl/Asparaginyl Beta-Hydroxylase; Membrane Lipoprotein Lipid Attachment Site

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKLVWILSGCLMLALTGGCASTGSVEAVRRDVDETKNRIYTIEKDLGTAREGEKTFKSDFAALRKGDADLQANLDSLKTD
LQLMAGKLDDQGLAIKKPVEELARYREDSDRRIVALEDRIVKLQVAVDELNKRMKEFAQNGSAPGKEATADALYLKGLES
FKGGDMPSARTQLTSFIEKNPGHDLVPNARYWIGETYYGEKNYEQAILEFQEVVKQYPKKEKAPAAMLKQALSFKALKDL
KSTQYLLKRLIGDYPKSDEAKKARVILKEVK

Sequences:

>Translated_271_residues
MKLVWILSGCLMLALTGGCASTGSVEAVRRDVDETKNRIYTIEKDLGTAREGEKTFKSDFAALRKGDADLQANLDSLKTD
LQLMAGKLDDQGLAIKKPVEELARYREDSDRRIVALEDRIVKLQVAVDELNKRMKEFAQNGSAPGKEATADALYLKGLES
FKGGDMPSARTQLTSFIEKNPGHDLVPNARYWIGETYYGEKNYEQAILEFQEVVKQYPKKEKAPAAMLKQALSFKALKDL
KSTQYLLKRLIGDYPKSDEAKKARVILKEVK
>Mature_271_residues
MKLVWILSGCLMLALTGGCASTGSVEAVRRDVDETKNRIYTIEKDLGTAREGEKTFKSDFAALRKGDADLQANLDSLKTD
LQLMAGKLDDQGLAIKKPVEELARYREDSDRRIVALEDRIVKLQVAVDELNKRMKEFAQNGSAPGKEATADALYLKGLES
FKGGDMPSARTQLTSFIEKNPGHDLVPNARYWIGETYYGEKNYEQAILEFQEVVKQYPKKEKAPAAMLKQALSFKALKDL
KSTQYLLKRLIGDYPKSDEAKKARVILKEVK

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786963, Length=96, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30371; Mature: 30371

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVWILSGCLMLALTGGCASTGSVEAVRRDVDETKNRIYTIEKDLGTAREGEKTFKSDF
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEHHHCCCCCCHHHHHHHHH
AALRKGDADLQANLDSLKTDLQLMAGKLDDQGLAIKKPVEELARYREDSDRRIVALEDRI
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHH
VKLQVAVDELNKRMKEFAQNGSAPGKEATADALYLKGLESFKGGDMPSARTQLTSFIEKN
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PGHDLVPNARYWIGETYYGEKNYEQAILEFQEVVKQYPKKEKAPAAMLKQALSFKALKDL
CCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KSTQYLLKRLIGDYPKSDEAKKARVILKEVK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKLVWILSGCLMLALTGGCASTGSVEAVRRDVDETKNRIYTIEKDLGTAREGEKTFKSDF
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEEHHHCCCCCCHHHHHHHHH
AALRKGDADLQANLDSLKTDLQLMAGKLDDQGLAIKKPVEELARYREDSDRRIVALEDRI
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHH
VKLQVAVDELNKRMKEFAQNGSAPGKEATADALYLKGLESFKGGDMPSARTQLTSFIEKN
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PGHDLVPNARYWIGETYYGEKNYEQAILEFQEVVKQYPKKEKAPAAMLKQALSFKALKDL
CCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KSTQYLLKRLIGDYPKSDEAKKARVILKEVK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA