Click here to switch to the map view.

The map label for this gene is 189423822

Identifier: 189423822

GI number: 189423822

Start: 763197

End: 764399

Strand: Reverse

Name: 189423822

Synonym: Glov_0753

Alternate gene names: NA

Gene position: 764399-763197 (Counterclockwise)

Preceding gene: 189423824

Following gene: 189423821

Centisome position: 19.51

GC content: 56.53

Gene sequence:

>1203_bases
ATGCGCATTACCACCAAACTGACATTGATCATAACGGTGCTGCTGATAACCCTTTTCATAGCGCTGGGCTGGAACTCGTA
CCAGCATGAGCTGAGTCTGATCCAGCAGCAGGCGGTTGAGAAGGCCCGCGTCATAGCGCGCCAGATCATTGAAACCCGTG
ATTATCTCTCCCGCGTCGAGCAGGGAGAATCGGAAAGGAACTACGCCCTGGTGCCTCAAGTGGCTGCCAGCCGGATCGCT
ATACGGATCACCGAAGGTTCTCCCTATTACGTCCGGCAGATCTCCCTGCGCAATCGCAACCCGGAAAACAGGCCGGATGC
CTACGAGGCCGCAGAACTGGCCCGGATCGCCTCGGCATCACTGCCGCAGGAACATTTCCGGGTGGTTGTCAGCGGCGGCA
AGGAAGCCCTGCGCTACCTGTTGCCAATGACGGCGGAAAAATCCTGTCTGACCTGCCATGGCAGCTTTGAATCAGCACCG
CGCTTTGTCCAGGAGCGTTTCCCCAAAGGCCACCCTTCCTACAACTACCGGGTCGGCGAAATGATCGGAGCCATTTCCGT
CTCAGTGCCGATGCGGGAGCTGTACCGCTCCATCGACAGCAACCTGATCCACGGGCTGGTGATTGAATCGGCCATTCTGC
TGCTGTTGCTGGTCTTTAGCGGCTGGGTCATCCATCGCGCCATCCTGAGACCGGTCTCCACCGTTGCCAAAGGAATCGAG
CGGGTAGCCAGCACCGCTGACTACACCCAGCGTATCGAGCATTCAAGTAATGATGAGATAGGTCATCTGGTCTCTTCCTT
TAACGAACTCATGGCTGAACTGGAGAGAAGGACACTCCAGCGGGCCGAGTCTGATGAGCGTTACCGCAATTTCATCGAAA
TTGCCCAGTCACCGATCATCACCTTCCTGCCGGATGGCAAGATCGTGATTGCCAACCAGAAAACCGAAACACTTTTGGGA
TTGACGAAGGAAGAGTTGCTCGGCCAGAGTATCTTCGACTTCATGGCCGATCCGGAGCCGCTCAAGGCAGGCATCAGGAG
CTATTCCCAAGGCGGCAGCAACGGACTGCTCGGCACCACCAGCATCCAGACCGTGCGCAACGTCTGCGGCAAACTGTTTG
AGGTGGAGATGGTGATATCGGTCTCGCAGACAGACCAGGAGGCGATGTTTACAGCCATACTCAGAACAGTAAAGGCCCCA
TAG

Upstream 100 bases:

>100_bases
GTTCAAGTTTTAGCTATTTTATCGGCCTGCCGAGGCTTGTCAATCCGGATATTCACGCTATACTCATGCAATTACAGTTC
TCAAAACCTATGAGGCGACC

Downstream 100 bases:

>100_bases
GGTACAATTGTAATGACAACAATCCAGACCGACAGACTTTTTCAACAGCTGACAAGGATCATGAATGAGGTTTCTCAGGG
CAACACCAGCAATCTAGAGA

Product: PAS/PAC sensor protein

Products: NA

Alternate protein names: Histidine Kinase; Methyl-Accepting Chemotaxis Sensory Transducer; Sensor Histidine Kinase; Sensor With HAMP Domain Protein; Diguanylate Cyclase/Phosphodiesterase; Two-Component Sensor Histidine Kinase; Methyl-Accepting Chemotaxis Protein; Chemotaxis Sensory Transducer; Mcp-Domain Signal Transduction Protein; Two-Component System Sensory/Regulatory Protein; Sensory Box Protein; Cytochrome C Family Protein

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MRITTKLTLIITVLLITLFIALGWNSYQHELSLIQQQAVEKARVIARQIIETRDYLSRVEQGESERNYALVPQVAASRIA
IRITEGSPYYVRQISLRNRNPENRPDAYEAAELARIASASLPQEHFRVVVSGGKEALRYLLPMTAEKSCLTCHGSFESAP
RFVQERFPKGHPSYNYRVGEMIGAISVSVPMRELYRSIDSNLIHGLVIESAILLLLLVFSGWVIHRAILRPVSTVAKGIE
RVASTADYTQRIEHSSNDEIGHLVSSFNELMAELERRTLQRAESDERYRNFIEIAQSPIITFLPDGKIVIANQKTETLLG
LTKEELLGQSIFDFMADPEPLKAGIRSYSQGGSNGLLGTTSIQTVRNVCGKLFEVEMVISVSQTDQEAMFTAILRTVKAP

Sequences:

>Translated_400_residues
MRITTKLTLIITVLLITLFIALGWNSYQHELSLIQQQAVEKARVIARQIIETRDYLSRVEQGESERNYALVPQVAASRIA
IRITEGSPYYVRQISLRNRNPENRPDAYEAAELARIASASLPQEHFRVVVSGGKEALRYLLPMTAEKSCLTCHGSFESAP
RFVQERFPKGHPSYNYRVGEMIGAISVSVPMRELYRSIDSNLIHGLVIESAILLLLLVFSGWVIHRAILRPVSTVAKGIE
RVASTADYTQRIEHSSNDEIGHLVSSFNELMAELERRTLQRAESDERYRNFIEIAQSPIITFLPDGKIVIANQKTETLLG
LTKEELLGQSIFDFMADPEPLKAGIRSYSQGGSNGLLGTTSIQTVRNVCGKLFEVEMVISVSQTDQEAMFTAILRTVKAP
>Mature_400_residues
MRITTKLTLIITVLLITLFIALGWNSYQHELSLIQQQAVEKARVIARQIIETRDYLSRVEQGESERNYALVPQVAASRIA
IRITEGSPYYVRQISLRNRNPENRPDAYEAAELARIASASLPQEHFRVVVSGGKEALRYLLPMTAEKSCLTCHGSFESAP
RFVQERFPKGHPSYNYRVGEMIGAISVSVPMRELYRSIDSNLIHGLVIESAILLLLLVFSGWVIHRAILRPVSTVAKGIE
RVASTADYTQRIEHSSNDEIGHLVSSFNELMAELERRTLQRAESDERYRNFIEIAQSPIITFLPDGKIVIANQKTETLLG
LTKEELLGQSIFDFMADPEPLKAGIRSYSQGGSNGLLGTTSIQTVRNVCGKLFEVEMVISVSQTDQEAMFTAILRTVKAP

Specific function: Unknown

COG id: COG2770

COG function: function code T; FOG: HAMP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44822; Mature: 44822

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS50885 HAMP ; PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITTKLTLIITVLLITLFIALGWNSYQHELSLIQQQAVEKARVIARQIIETRDYLSRVE
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGESERNYALVPQVAASRIAIRITEGSPYYVRQISLRNRNPENRPDAYEAAELARIASAS
CCCCCCCEEECHHHHHCEEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHC
LPQEHFRVVVSGGKEALRYLLPMTAEKSCLTCHGSFESAPRFVQERFPKGHPSYNYRVGE
CCHHHHHHHHCCCHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHH
MIGAISVSVPMRELYRSIDSNLIHGLVIESAILLLLLVFSGWVIHRAILRPVSTVAKGIE
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVASTADYTQRIEHSSNDEIGHLVSSFNELMAELERRTLQRAESDERYRNFIEIAQSPII
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
TFLPDGKIVIANQKTETLLGLTKEELLGQSIFDFMADPEPLKAGIRSYSQGGSNGLLGTT
EEECCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCH
SIQTVRNVCGKLFEVEMVISVSQTDQEAMFTAILRTVKAP
HHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRITTKLTLIITVLLITLFIALGWNSYQHELSLIQQQAVEKARVIARQIIETRDYLSRVE
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGESERNYALVPQVAASRIAIRITEGSPYYVRQISLRNRNPENRPDAYEAAELARIASAS
CCCCCCCEEECHHHHHCEEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHC
LPQEHFRVVVSGGKEALRYLLPMTAEKSCLTCHGSFESAPRFVQERFPKGHPSYNYRVGE
CCHHHHHHHHCCCHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHH
MIGAISVSVPMRELYRSIDSNLIHGLVIESAILLLLLVFSGWVIHRAILRPVSTVAKGIE
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVASTADYTQRIEHSSNDEIGHLVSSFNELMAELERRTLQRAESDERYRNFIEIAQSPII
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
TFLPDGKIVIANQKTETLLGLTKEELLGQSIFDFMADPEPLKAGIRSYSQGGSNGLLGTT
EEECCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCH
SIQTVRNVCGKLFEVEMVISVSQTDQEAMFTAILRTVKAP
HHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA