| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423818
Identifier: 189423818
GI number: 189423818
Start: 760032
End: 761504
Strand: Reverse
Name: 189423818
Synonym: Glov_0749
Alternate gene names: NA
Gene position: 761504-760032 (Counterclockwise)
Preceding gene: 189423819
Following gene: 189423817
Centisome position: 19.44
GC content: 57.03
Gene sequence:
>1473_bases ATGATTGCTTGCCGTTTGCAGGCCGTTATCGCCCTCTGCCTGCTCTCATTGTACCTGTCTCCTGCTGTAGGTTATGCCGC CGGGTCGACCATGACACTTGACGACTGCATTGCCGTGGCCCTGCGGGAAAACCGTACCATCAAAAACGCCTACCTTGACC GGGTGGTACAGAAATACACCCTGCGGATGGCAGAAGAAAAATTCATCCCAACATTGACCATAACCCCGGCTATTACCGGC ACCGGCACGACACGCGCCCTCGGCAGCAGCAATGCCGCTAGCGCCGGCACGACGACAACTACCTCTGCCGTTACAACAAA CGCCAGCGAAAAACTACCCACCGGCGCCACCTTGACCCTGAACGGCAGCTACGGCATCAGCAGCACAGAACAGTCCAGTC CCACCAGGGCCTATGGCTGGAACGCCAGCCTGACTCAGCCGTTGCTGAAAGGTGGCGGCCTGGATGTCAACCTGGCCTCC GTGCGTCAGGCCCGCCTGACCGAGCAGAGCAATATCCTTTCGCTTAAAACCACCATCACCGCAACTGTTACCGACGTGGT GAGCGCCTATCGCAGCTATGTCCAGGCCATTAAATCCCTTGAGATCACCCGGCAGTCGCTGGAGCGCAGCCGTGAGCTGG TGGCCACCAACCGCGAATTGATCGCGGCCGGCAGAATGGCTGCCATTGAGATCGTCCAGTCCGAGGCAGATCTTGCCAAC CGCGAGTTTTCGCTACTCTCTGCAGAAAACCAGGTGGATGCGGCCCGTCTGGCCCTGACCAAGGCAATTGATATCGACAA AAACAGCCGGATATCACCGTCAACGGAATCAGAGATCCCGCCGGTGCCGTACAGCCATGAGCAGGCCAAACGGCTTGCCT TTGAAAACCGCCCCGATTATCTGCAGAGCCTGCTCAACTATGAAAACACCAAGATACAACTGATGCTGGCCAAAAACGGC ACCCTCTGGGATCTCTCTCTGACCGGCAGCTACGGCGAAGACTACACTCGCAGCGCCGCAACCGGCCCGGTCAGTTCCAA CGGCGTCTGGACGGCAGGCCTGACGTTGACCATCCCGTTCGACAACCTCTATCGCGCCTCCACCGAACGCAGCGCCTATA TCGCTGCTGATATTGCCCTCAGAAAGTTTGAAAATGATCTGGCAAGACAGCGTGAGAACATTGAGATCGAGGTACAGGAT GCCCTGCGCAACGCCGAGATGAACTACCGCCAGATCAAACTGGCCACCCTGGCACGCACCCTGTCGGAAAAAAAGGTGGA GATCGAGACGGAAAAGCTGAAAGCCGGGCGCTCCACCAACTTTCAGCTGGTCAGTTACCAGAACGACCTGGTCAGTGCCC AGAATAACGAGCTGGCGGCTATCATCACCTACCTGAACGCCCTGACCACACTGGAAAGCAAACTTGGTATCATCCTTGAA CGCCGGGGCATTACATTATCTGAACGCAAGTAA
Upstream 100 bases:
>100_bases TATACTTCATTCGCACGCTGACTGATCTGGTCAGCTACCGTCGTGAAGAGGGGCTGAATATCCTGCAGATGGTATTGTAC AAGACAGGGGAACCCCGTTC
Downstream 100 bases:
>100_bases CCAGGAGCATCATGGAACGGGACAACATAATTTCAGGCCGGATTCTGGATGACATGACCGACGGGGTACTTGCCGTTGAC CTCTCCGGCACTATCATCAC
Product: outer membrane efflux protein
Products: NA
Alternate protein names: Outer Membrane Protein; Outer Membrane Efflux Family Protein; Outer Membrane Lipoprotein; RND Family Efflux Pump Outer Membrane Protein; Type I Secretion Outer Membrane Protein; Outer Membrane Efflux Protein Family; Outer Efflux Pump Domain-Containing Protein
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MIACRLQAVIALCLLSLYLSPAVGYAAGSTMTLDDCIAVALRENRTIKNAYLDRVVQKYTLRMAEEKFIPTLTITPAITG TGTTRALGSSNAASAGTTTTTSAVTTNASEKLPTGATLTLNGSYGISSTEQSSPTRAYGWNASLTQPLLKGGGLDVNLAS VRQARLTEQSNILSLKTTITATVTDVVSAYRSYVQAIKSLEITRQSLERSRELVATNRELIAAGRMAAIEIVQSEADLAN REFSLLSAENQVDAARLALTKAIDIDKNSRISPSTESEIPPVPYSHEQAKRLAFENRPDYLQSLLNYENTKIQLMLAKNG TLWDLSLTGSYGEDYTRSAATGPVSSNGVWTAGLTLTIPFDNLYRASTERSAYIAADIALRKFENDLARQRENIEIEVQD ALRNAEMNYRQIKLATLARTLSEKKVEIETEKLKAGRSTNFQLVSYQNDLVSAQNNELAAIITYLNALTTLESKLGIILE RRGITLSERK
Sequences:
>Translated_490_residues MIACRLQAVIALCLLSLYLSPAVGYAAGSTMTLDDCIAVALRENRTIKNAYLDRVVQKYTLRMAEEKFIPTLTITPAITG TGTTRALGSSNAASAGTTTTTSAVTTNASEKLPTGATLTLNGSYGISSTEQSSPTRAYGWNASLTQPLLKGGGLDVNLAS VRQARLTEQSNILSLKTTITATVTDVVSAYRSYVQAIKSLEITRQSLERSRELVATNRELIAAGRMAAIEIVQSEADLAN REFSLLSAENQVDAARLALTKAIDIDKNSRISPSTESEIPPVPYSHEQAKRLAFENRPDYLQSLLNYENTKIQLMLAKNG TLWDLSLTGSYGEDYTRSAATGPVSSNGVWTAGLTLTIPFDNLYRASTERSAYIAADIALRKFENDLARQRENIEIEVQD ALRNAEMNYRQIKLATLARTLSEKKVEIETEKLKAGRSTNFQLVSYQNDLVSAQNNELAAIITYLNALTTLESKLGIILE RRGITLSERK >Mature_490_residues MIACRLQAVIALCLLSLYLSPAVGYAAGSTMTLDDCIAVALRENRTIKNAYLDRVVQKYTLRMAEEKFIPTLTITPAITG TGTTRALGSSNAASAGTTTTTSAVTTNASEKLPTGATLTLNGSYGISSTEQSSPTRAYGWNASLTQPLLKGGGLDVNLAS VRQARLTEQSNILSLKTTITATVTDVVSAYRSYVQAIKSLEITRQSLERSRELVATNRELIAAGRMAAIEIVQSEADLAN REFSLLSAENQVDAARLALTKAIDIDKNSRISPSTESEIPPVPYSHEQAKRLAFENRPDYLQSLLNYENTKIQLMLAKNG TLWDLSLTGSYGEDYTRSAATGPVSSNGVWTAGLTLTIPFDNLYRASTERSAYIAADIALRKFENDLARQRENIEIEVQD ALRNAEMNYRQIKLATLARTLSEKKVEIETEKLKAGRSTNFQLVSYQNDLVSAQNNELAAIITYLNALTTLESKLGIILE RRGITLSERK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53487; Mature: 53487
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIACRLQAVIALCLLSLYLSPAVGYAAGSTMTLDDCIAVALRENRTIKNAYLDRVVQKYT CCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH LRMAEEKFIPTLTITPAITGTGTTRALGSSNAASAGTTTTTSAVTTNASEKLPTGATLTL HHHHHHHCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEE NGSYGISSTEQSSPTRAYGWNASLTQPLLKGGGLDVNLASVRQARLTEQSNILSLKTTIT CCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEEHHHH ATVTDVVSAYRSYVQAIKSLEITRQSLERSRELVATNRELIAAGRMAAIEIVQSEADLAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCC REFSLLSAENQVDAARLALTKAIDIDKNSRISPSTESEIPPVPYSHEQAKRLAFENRPDY CCEEEEECCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHH LQSLLNYENTKIQLMLAKNGTLWDLSLTGSYGEDYTRSAATGPVSSNGVWTAGLTLTIPF HHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECEEEEECC DNLYRASTERSAYIAADIALRKFENDLARQRENIEIEVQDALRNAEMNYRQIKLATLART HHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCHHEEHHHHHHHH LSEKKVEIETEKLKAGRSTNFQLVSYQNDLVSAQNNELAAIITYLNALTTLESKLGIILE HHHCCEEEEHHHHHCCCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHCEEEE RRGITLSERK ECCCCCCCCC >Mature Secondary Structure MIACRLQAVIALCLLSLYLSPAVGYAAGSTMTLDDCIAVALRENRTIKNAYLDRVVQKYT CCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH LRMAEEKFIPTLTITPAITGTGTTRALGSSNAASAGTTTTTSAVTTNASEKLPTGATLTL HHHHHHHCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEE NGSYGISSTEQSSPTRAYGWNASLTQPLLKGGGLDVNLASVRQARLTEQSNILSLKTTIT CCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEEHHHH ATVTDVVSAYRSYVQAIKSLEITRQSLERSRELVATNRELIAAGRMAAIEIVQSEADLAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCC REFSLLSAENQVDAARLALTKAIDIDKNSRISPSTESEIPPVPYSHEQAKRLAFENRPDY CCEEEEECCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHH LQSLLNYENTKIQLMLAKNGTLWDLSLTGSYGEDYTRSAATGPVSSNGVWTAGLTLTIPF HHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECEEEEECC DNLYRASTERSAYIAADIALRKFENDLARQRENIEIEVQDALRNAEMNYRQIKLATLART HHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCHHEEHHHHHHHH LSEKKVEIETEKLKAGRSTNFQLVSYQNDLVSAQNNELAAIITYLNALTTLESKLGIILE HHHCCEEEEHHHHHCCCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHCEEEE RRGITLSERK ECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA