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The map label for this gene is ybjY [C]

Identifier: 189423817

GI number: 189423817

Start: 758197

End: 760020

Strand: Reverse

Name: ybjY [C]

Synonym: Glov_0748

Alternate gene names: 189423817

Gene position: 760020-758197 (Counterclockwise)

Preceding gene: 189423818

Following gene: 189423816

Centisome position: 19.4

GC content: 55.43

Gene sequence:

>1824_bases
ATGGAACGGGACAACATAATTTCAGGCCGGATTCTGGATGACATGACCGACGGGGTACTTGCCGTTGACCTCTCCGGCAC
TATCATCACCTTTAACCCGGCAGCAGCCAGAATTCTGGGGATTGCAGAAGAAAACGCGCTGATGAAATCCTTTGGCGAGA
TATTTCTGCTGGCTGAAGAGAACGACGATTTCAACCAGACCATTCTGGATGCGATCTACGAATCATCCACCAGTCACAAC
CGGATTGTCCCGTTTTCCTGCAATGACAAACGCACCACCCTGGCGTTAACCACCACCTTTCTTAAAGCAGAAGATGGCAC
CGACCAGCGGATGGGGGTGATTGCCGTATTCAGTGATATTACTGAACTGCAGGCATTACAGGAGGCCGAAGCGCGACTGG
CGGAAGAGCTGAAGAGCAAACACAAAGAGCTGCAGGCAGCCTACCTGAAGACTGAAGAAGGGAATCAGCAGTTACAGTCG
GCCCTGAAAAAGGTTCAGATCATCAGGAACACCGCCACCGCCTTCACCATCATTCTCTTCCTGGGGATCGGGCTGTTTGT
CTGGAACCGCAAGCCCGCCAGTATCAGCTCGTCACCGGCATCAGCAGCAACAGTCCAGGGAGCAGCAACAACCGTCATAC
CTGTTACGCCGCAGCCGGTTTCAAGCAGCATCGCCCTGACCGGCAAGCTGCTGCCGTTGCAGATGGTGAATATCACCAGC
CCGATCTCCGGCAAGGTGGGGCAGGTGATGGTCCGCTACGGAGATGTTGTCAAGGCTGGACAACCGCTGCTGACCATGGA
CACCTCTGAGGCGATGATCAAGTACCGCGAGGCAAAGGCAGCCTACATCAAGGCGCAAAACAGTTACCAACAGATGGAGA
AATGGGATGCCAGCGCAGATGTTGCCAGGGCACACCGCTCCCTGGCAAAGGCCAAACTTTCACTGGAAAACCAAAAGAAA
ACCCTGGACGAATCAGAGCGGCTGTATAAAAAGGGGATTATCCCGGCCACCGAGTATGAATCTGCCAAACACCAGTACAG
CAACCAGCAGATGGACTACCAGAGCGCCCAGGAAGAGTTGAAGGCTGCCCAGGAAAAGGGGAACAGCGAAAACCGTAAAG
TTTCCCGTTTTGAGCTGGAAAATGCCGAATCCCGTATGCGGCAGGCAGAAAAGGATATTGCCTCCTCCACAGTGGTGGCC
CCGGTTTCCGGTATTATCATGAAACCGCCCGCCAGTGGCCAGTCCAAGGAAGGCAGAACCGTGGAGCGCGGCACCACCTT
CCAGCAGGGCGAGCTGCTGCTGGCCATCGGCGACCTGTCAGGATTTTCCGTCAATGCCAGGCTGGATGAGGTGGATGTCA
CCAAGGTCCAGCTGGGACAAAAGGTACGGGTAAGCGGCGATGCCTTTCCCGGTCAACAGTTGACCGGCAGCATCCAGAGC
ATCTCCCCCCATGCTGAAGAAGGTGAAGCAGGCAAGTCAGTTTCCTCCTTTGGCATCAAGGTGGTAATTGACTCAGTACC
GCCAGAACTGAAAAAACGGATCATGGTGGGGATGACCGCCAACCTTGAGATTATCATCTATGAAAAGCCTGATGCCCTGA
TGGTGCCGCTGGCTGCTGTGCATGATGAGCAGGGCAAGCGTTATGTCACCAGAAAAAAAGGGACTGCCCCGTCAGATGCG
GCTGAAAAAGTACCGGTCACCACCGGCTACACCACCCAGGATACGGTTGAGATCACCAGCGGGCTGAAGGCCGGTGACCT
GCTGGAGGTAACCACGTTCGGCCCTCCGCCTGCACCCGCCAGCCCCTCTGGCGGGAAGCCCTGA

Upstream 100 bases:

>100_bases
TCACCTACCTGAACGCCCTGACCACACTGGAAAGCAAACTTGGTATCATCCTTGAACGCCGGGGCATTACATTATCTGAA
CGCAAGTAACCAGGAGCATC

Downstream 100 bases:

>100_bases
GATGCTGACCCTGCGCGATATACGTAAATCCTACCGGATCGGCCCCACCGAAGTGGAAGTACTCAAAGGTGTCTCCCTTG
AGATTCAGCAGGGCGAGCTG

Product: PAS/PAC sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 607; Mature: 607

Protein sequence:

>607_residues
MERDNIISGRILDDMTDGVLAVDLSGTIITFNPAAARILGIAEENALMKSFGEIFLLAEENDDFNQTILDAIYESSTSHN
RIVPFSCNDKRTTLALTTTFLKAEDGTDQRMGVIAVFSDITELQALQEAEARLAEELKSKHKELQAAYLKTEEGNQQLQS
ALKKVQIIRNTATAFTIILFLGIGLFVWNRKPASISSSPASAATVQGAATTVIPVTPQPVSSSIALTGKLLPLQMVNITS
PISGKVGQVMVRYGDVVKAGQPLLTMDTSEAMIKYREAKAAYIKAQNSYQQMEKWDASADVARAHRSLAKAKLSLENQKK
TLDESERLYKKGIIPATEYESAKHQYSNQQMDYQSAQEELKAAQEKGNSENRKVSRFELENAESRMRQAEKDIASSTVVA
PVSGIIMKPPASGQSKEGRTVERGTTFQQGELLLAIGDLSGFSVNARLDEVDVTKVQLGQKVRVSGDAFPGQQLTGSIQS
ISPHAEEGEAGKSVSSFGIKVVIDSVPPELKKRIMVGMTANLEIIIYEKPDALMVPLAAVHDEQGKRYVTRKKGTAPSDA
AEKVPVTTGYTTQDTVEITSGLKAGDLLEVTTFGPPPAPASPSGGKP

Sequences:

>Translated_607_residues
MERDNIISGRILDDMTDGVLAVDLSGTIITFNPAAARILGIAEENALMKSFGEIFLLAEENDDFNQTILDAIYESSTSHN
RIVPFSCNDKRTTLALTTTFLKAEDGTDQRMGVIAVFSDITELQALQEAEARLAEELKSKHKELQAAYLKTEEGNQQLQS
ALKKVQIIRNTATAFTIILFLGIGLFVWNRKPASISSSPASAATVQGAATTVIPVTPQPVSSSIALTGKLLPLQMVNITS
PISGKVGQVMVRYGDVVKAGQPLLTMDTSEAMIKYREAKAAYIKAQNSYQQMEKWDASADVARAHRSLAKAKLSLENQKK
TLDESERLYKKGIIPATEYESAKHQYSNQQMDYQSAQEELKAAQEKGNSENRKVSRFELENAESRMRQAEKDIASSTVVA
PVSGIIMKPPASGQSKEGRTVERGTTFQQGELLLAIGDLSGFSVNARLDEVDVTKVQLGQKVRVSGDAFPGQQLTGSIQS
ISPHAEEGEAGKSVSSFGIKVVIDSVPPELKKRIMVGMTANLEIIIYEKPDALMVPLAAVHDEQGKRYVTRKKGTAPSDA
AEKVPVTTGYTTQDTVEITSGLKAGDLLEVTTFGPPPAPASPSGGKP
>Mature_607_residues
MERDNIISGRILDDMTDGVLAVDLSGTIITFNPAAARILGIAEENALMKSFGEIFLLAEENDDFNQTILDAIYESSTSHN
RIVPFSCNDKRTTLALTTTFLKAEDGTDQRMGVIAVFSDITELQALQEAEARLAEELKSKHKELQAAYLKTEEGNQQLQS
ALKKVQIIRNTATAFTIILFLGIGLFVWNRKPASISSSPASAATVQGAATTVIPVTPQPVSSSIALTGKLLPLQMVNITS
PISGKVGQVMVRYGDVVKAGQPLLTMDTSEAMIKYREAKAAYIKAQNSYQQMEKWDASADVARAHRSLAKAKLSLENQKK
TLDESERLYKKGIIPATEYESAKHQYSNQQMDYQSAQEELKAAQEKGNSENRKVSRFELENAESRMRQAEKDIASSTVVA
PVSGIIMKPPASGQSKEGRTVERGTTFQQGELLLAIGDLSGFSVNARLDEVDVTKVQLGQKVRVSGDAFPGQQLTGSIQS
ISPHAEEGEAGKSVSSFGIKVVIDSVPPELKKRIMVGMTANLEIIIYEKPDALMVPLAAVHDEQGKRYVTRKKGTAPSDA
AEKVPVTTGYTTQDTVEITSGLKAGDLLEVTTFGPPPAPASPSGGKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI87081796, Length=374, Percent_Identity=24.8663101604278, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI1787013, Length=254, Percent_Identity=26.7716535433071, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 65638; Mature: 65638

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERDNIISGRILDDMTDGVLAVDLSGTIITFNPAAARILGIAEENALMKSFGEIFLLAEE
CCCCCEECCCCHHCCCCCEEEEEECCEEEEECHHHHHEEEEHHHHHHHHCCCCEEEEEEC
NDDFNQTILDAIYESSTSHNRIVPFSCNDKRTTLALTTTFLKAEDGTDQRMGVIAVFSDI
CCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEEHHHHH
TELQALQEAEARLAEELKSKHKELQAAYLKTEEGNQQLQSALKKVQIIRNTATAFTIILF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIGLFVWNRKPASISSSPASAATVQGAATTVIPVTPQPVSSSIALTGKLLPLQMVNITS
HHHHHEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCEEEEECCCEEEEEECCC
PISGKVGQVMVRYGDVVKAGQPLLTMDTSEAMIKYREAKAAYIKAQNSYQQMEKWDASAD
CCCCCHHHHHHHHCCHHHCCCCEEEECCHHHHHHHHHHHEEEEEECHHHHHHHHHCCCHH
VARAHRSLAKAKLSLENQKKTLDESERLYKKGIIPATEYESAKHQYSNQQMDYQSAQEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
KAAQEKGNSENRKVSRFELENAESRMRQAEKDIASSTVVAPVSGIIMKPPASGQSKEGRT
HHHHHCCCCCCCEEHEEEHHHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCE
VERGTTFQQGELLLAIGDLSGFSVNARLDEVDVTKVQLGQKVRVSGDAFPGQQLTGSIQS
EECCCCCCCCCEEEEEECCCCCEEECCCCCCCCHHHHCCCEEEECCCCCCCHHHCCCHHH
ISPHAEEGEAGKSVSSFGIKVVIDSVPPELKKRIMVGMTANLEIIIYEKPDALMVPLAAV
CCCCCCCCCCCCCHHHCCEEEEEECCCHHHHHHEEEEEECCEEEEEEECCCCEEEEHHHH
HDEQGKRYVTRKKGTAPSDAAEKVPVTTGYTTQDTVEITSGLKAGDLLEVTTFGPPPAPA
CCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCC
SPSGGKP
CCCCCCC
>Mature Secondary Structure
MERDNIISGRILDDMTDGVLAVDLSGTIITFNPAAARILGIAEENALMKSFGEIFLLAEE
CCCCCEECCCCHHCCCCCEEEEEECCEEEEECHHHHHEEEEHHHHHHHHCCCCEEEEEEC
NDDFNQTILDAIYESSTSHNRIVPFSCNDKRTTLALTTTFLKAEDGTDQRMGVIAVFSDI
CCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEEHHHHH
TELQALQEAEARLAEELKSKHKELQAAYLKTEEGNQQLQSALKKVQIIRNTATAFTIILF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIGLFVWNRKPASISSSPASAATVQGAATTVIPVTPQPVSSSIALTGKLLPLQMVNITS
HHHHHEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCEEEEECCCEEEEEECCC
PISGKVGQVMVRYGDVVKAGQPLLTMDTSEAMIKYREAKAAYIKAQNSYQQMEKWDASAD
CCCCCHHHHHHHHCCHHHCCCCEEEECCHHHHHHHHHHHEEEEEECHHHHHHHHHCCCHH
VARAHRSLAKAKLSLENQKKTLDESERLYKKGIIPATEYESAKHQYSNQQMDYQSAQEEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
KAAQEKGNSENRKVSRFELENAESRMRQAEKDIASSTVVAPVSGIIMKPPASGQSKEGRT
HHHHHCCCCCCCEEHEEEHHHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCE
VERGTTFQQGELLLAIGDLSGFSVNARLDEVDVTKVQLGQKVRVSGDAFPGQQLTGSIQS
EECCCCCCCCCEEEEEECCCCCEEECCCCCCCCHHHHCCCEEEECCCCCCCHHHCCCHHH
ISPHAEEGEAGKSVSSFGIKVVIDSVPPELKKRIMVGMTANLEIIIYEKPDALMVPLAAV
CCCCCCCCCCCCCHHHCCEEEEEECCCHHHHHHEEEEEECCEEEEEEECCCCEEEEHHHH
HDEQGKRYVTRKKGTAPSDAAEKVPVTTGYTTQDTVEITSGLKAGDLLEVTTFGPPPAPA
CCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCC
SPSGGKP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA