| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is yahD [C]
Identifier: 189423754
GI number: 189423754
Start: 694700
End: 695122
Strand: Reverse
Name: yahD [C]
Synonym: Glov_0685
Alternate gene names: 189423754
Gene position: 695122-694700 (Counterclockwise)
Preceding gene: 189423756
Following gene: 189423753
Centisome position: 17.74
GC content: 56.5
Gene sequence:
>423_bases ATGGAGAATGTAAATGCCAAGGATCGCAACGGCCACACCCTGCTAATCAGTGCCTCCAAGCAAGGTCAGATCGACAGCGT CAAGGATCTGCTTCATCGTGGTGCCGACATCACCGCCTCCAGCGACAAAGGCAAGACTGCCCTGCATTACGCCGCTGCCA ACGGCAACACCGAGATCGTCAAAATGCTGATAGAGAAAGGTGCCGAGATTGATGCACGTGATCGCGATGGGCATACCCCG CTGATGCTGGCCGCCATCTATGGCTGCAACCTGACGGTACAGGCCCTGCTGGAAGGCGGTGCAGACCCCCGTGCAAAAAC CAAATGCGGCAACACCGCCGTGCTGTATGCTGAAAACAACAGCCACCCGGTTGCCGCCACTCTTCTCAAGAAGGCCGAAC GATCAAAAGCCGGTAACGCTTAA
Upstream 100 bases:
>100_bases CGACTGCCTCCAGGTGGCCGGCTTTGCATCCAAACCCGGCAACATCAATTGAACCGGTGTAAACCAGCAGACCAATCTCA TGCAAAGGGAGGAAAAACCA
Downstream 100 bases:
>100_bases CCTCTCTCCCCCCGCCGGTTAACTACCGCGGGGGGATTTTTTCCCATCCCTTGCCACTGGAATTTTTCACAACGACCGGG TATGATGCCGCTCCAATCTT
Product: ankyrin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MENVNAKDRNGHTLLISASKQGQIDSVKDLLHRGADITASSDKGKTALHYAAANGNTEIVKMLIEKGAEIDARDRDGHTP LMLAAIYGCNLTVQALLEGGADPRAKTKCGNTAVLYAENNSHPVAATLLKKAERSKAGNA
Sequences:
>Translated_140_residues MENVNAKDRNGHTLLISASKQGQIDSVKDLLHRGADITASSDKGKTALHYAAANGNTEIVKMLIEKGAEIDARDRDGHTP LMLAAIYGCNLTVQALLEGGADPRAKTKCGNTAVLYAENNSHPVAATLLKKAERSKAGNA >Mature_140_residues MENVNAKDRNGHTLLISASKQGQIDSVKDLLHRGADITASSDKGKTALHYAAANGNTEIVKMLIEKGAEIDARDRDGHTP LMLAAIYGCNLTVQALLEGGADPRAKTKCGNTAVLYAENNSHPVAATLLKKAERSKAGNA
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 18 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI68131557, Length=124, Percent_Identity=40.3225806451613, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI52426735, Length=127, Percent_Identity=37.007874015748, Blast_Score=82, Evalue=2e-16, Organism=Homo sapiens, GI70995267, Length=120, Percent_Identity=36.6666666666667, Blast_Score=80, Evalue=4e-16, Organism=Homo sapiens, GI188595682, Length=127, Percent_Identity=37.007874015748, Blast_Score=80, Evalue=5e-16, Organism=Homo sapiens, GI52426737, Length=127, Percent_Identity=37.007874015748, Blast_Score=80, Evalue=5e-16, Organism=Homo sapiens, GI32967601, Length=127, Percent_Identity=37.007874015748, Blast_Score=80, Evalue=6e-16, Organism=Homo sapiens, GI55742857, Length=121, Percent_Identity=38.8429752066116, Blast_Score=80, Evalue=6e-16, Organism=Homo sapiens, GI268607595, Length=129, Percent_Identity=38.7596899224806, Blast_Score=79, Evalue=1e-15, Organism=Homo sapiens, GI62988328, Length=129, Percent_Identity=38.7596899224806, Blast_Score=79, Evalue=1e-15, Organism=Homo sapiens, GI89363047, Length=118, Percent_Identity=38.9830508474576, Blast_Score=77, Evalue=5e-15, Organism=Homo sapiens, GI225543463, Length=99, Percent_Identity=41.4141414141414, Blast_Score=77, Evalue=5e-15, Organism=Homo sapiens, GI20270347, Length=96, Percent_Identity=42.7083333333333, Blast_Score=77, Evalue=7e-15, Organism=Homo sapiens, GI225543461, Length=99, Percent_Identity=41.4141414141414, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI70780355, Length=135, Percent_Identity=37.037037037037, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI70780359, Length=135, Percent_Identity=37.037037037037, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI70780357, Length=135, Percent_Identity=37.037037037037, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI215598574, Length=135, Percent_Identity=37.037037037037, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI70780353, Length=135, Percent_Identity=37.037037037037, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI157739945, Length=99, Percent_Identity=40.4040404040404, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI24233530, Length=114, Percent_Identity=39.4736842105263, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI224809478, Length=115, Percent_Identity=37.3913043478261, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI224809476, Length=115, Percent_Identity=37.3913043478261, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI224809472, Length=115, Percent_Identity=37.3913043478261, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI224809470, Length=115, Percent_Identity=37.3913043478261, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI224809468, Length=115, Percent_Identity=37.3913043478261, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI224809474, Length=115, Percent_Identity=37.3913043478261, Blast_Score=74, Evalue=4e-14, Organism=Homo sapiens, GI116875852, Length=127, Percent_Identity=33.8582677165354, Blast_Score=73, Evalue=7e-14, Organism=Homo sapiens, GI12746412, Length=111, Percent_Identity=42.3423423423423, Blast_Score=73, Evalue=9e-14, Organism=Homo sapiens, GI304361760, Length=143, Percent_Identity=35.6643356643357, Blast_Score=72, Evalue=1e-13, Organism=Homo sapiens, GI304361757, Length=143, Percent_Identity=35.6643356643357, Blast_Score=72, Evalue=1e-13, Organism=Homo sapiens, GI34304379, Length=127, Percent_Identity=34.6456692913386, Blast_Score=71, Evalue=3e-13, Organism=Homo sapiens, GI34304381, Length=127, Percent_Identity=34.6456692913386, Blast_Score=71, Evalue=3e-13, Organism=Homo sapiens, GI55741641, Length=129, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=4e-13, Organism=Homo sapiens, GI87239981, Length=142, Percent_Identity=37.3239436619718, Blast_Score=70, Evalue=4e-13, Organism=Homo sapiens, GI38569428, Length=112, Percent_Identity=40.1785714285714, Blast_Score=70, Evalue=6e-13, Organism=Homo sapiens, GI38569426, Length=112, Percent_Identity=40.1785714285714, Blast_Score=70, Evalue=6e-13, Organism=Homo sapiens, GI13376842, Length=143, Percent_Identity=36.3636363636364, Blast_Score=70, Evalue=7e-13, Organism=Homo sapiens, GI46519147, Length=100, Percent_Identity=44, Blast_Score=70, Evalue=7e-13, Organism=Homo sapiens, GI38683816, Length=89, Percent_Identity=44.9438202247191, Blast_Score=70, Evalue=7e-13, Organism=Homo sapiens, GI38683807, Length=130, Percent_Identity=36.1538461538462, Blast_Score=70, Evalue=8e-13, Organism=Homo sapiens, GI37620163, Length=100, Percent_Identity=44, Blast_Score=70, Evalue=8e-13, Organism=Homo sapiens, GI110431370, Length=130, Percent_Identity=38.4615384615385, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI46519151, Length=100, Percent_Identity=44, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI21956645, Length=107, Percent_Identity=38.3177570093458, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI157743284, Length=114, Percent_Identity=34.2105263157895, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI46519154, Length=100, Percent_Identity=44, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI118150656, Length=126, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI148596917, Length=129, Percent_Identity=34.8837209302326, Blast_Score=68, Evalue=2e-12, Organism=Homo sapiens, GI156142199, Length=137, Percent_Identity=32.1167883211679, Blast_Score=68, Evalue=3e-12, Organism=Homo sapiens, GI156142197, Length=137, Percent_Identity=32.1167883211679, Blast_Score=68, Evalue=3e-12, Organism=Homo sapiens, GI17864094, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=3e-12, Organism=Homo sapiens, GI19924156, Length=112, Percent_Identity=39.2857142857143, Blast_Score=67, Evalue=4e-12, Organism=Homo sapiens, GI4506499, Length=112, Percent_Identity=39.2857142857143, Blast_Score=67, Evalue=4e-12, Organism=Homo sapiens, GI30425444, Length=107, Percent_Identity=39.2523364485981, Blast_Score=67, Evalue=4e-12, Organism=Homo sapiens, GI223634006, Length=107, Percent_Identity=36.4485981308411, Blast_Score=67, Evalue=5e-12, Organism=Homo sapiens, GI116325987, Length=95, Percent_Identity=42.1052631578947, Blast_Score=66, Evalue=8e-12, Organism=Homo sapiens, GI7657265, Length=113, Percent_Identity=37.1681415929204, Blast_Score=66, Evalue=8e-12, Organism=Homo sapiens, GI28605137, Length=107, Percent_Identity=39.2523364485981, Blast_Score=65, Evalue=1e-11, Organism=Homo sapiens, GI4506217, Length=107, Percent_Identity=39.2523364485981, Blast_Score=65, Evalue=1e-11, Organism=Homo sapiens, GI22208951, Length=126, Percent_Identity=34.9206349206349, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI16975496, Length=112, Percent_Identity=38.3928571428571, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI14249672, Length=91, Percent_Identity=40.6593406593407, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI7705831, Length=126, Percent_Identity=34.9206349206349, Blast_Score=65, Evalue=3e-11, Organism=Homo sapiens, GI255982572, Length=126, Percent_Identity=34.9206349206349, Blast_Score=64, Evalue=3e-11, Organism=Homo sapiens, GI30089994, Length=114, Percent_Identity=37.719298245614, Blast_Score=64, Evalue=4e-11, Organism=Homo sapiens, GI14150169, Length=96, Percent_Identity=39.5833333333333, Blast_Score=64, Evalue=4e-11, Organism=Homo sapiens, GI7705748, Length=129, Percent_Identity=35.6589147286822, Blast_Score=64, Evalue=5e-11, Organism=Homo sapiens, GI56676397, Length=131, Percent_Identity=33.587786259542, Blast_Score=64, Evalue=5e-11, Organism=Homo sapiens, GI163914396, Length=129, Percent_Identity=35.6589147286822, Blast_Score=64, Evalue=5e-11, Organism=Homo sapiens, GI38176283, Length=114, Percent_Identity=37.719298245614, Blast_Score=64, Evalue=6e-11, Organism=Homo sapiens, GI112799849, Length=101, Percent_Identity=41.5841584158416, Blast_Score=63, Evalue=8e-11, Organism=Homo sapiens, GI18640738, Length=120, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71981411, Length=141, Percent_Identity=38.2978723404255, Blast_Score=79, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17553810, Length=150, Percent_Identity=35.3333333333333, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25145251, Length=141, Percent_Identity=38.2978723404255, Blast_Score=78, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71981389, Length=141, Percent_Identity=38.2978723404255, Blast_Score=78, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17542700, Length=141, Percent_Identity=38.2978723404255, Blast_Score=78, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71981414, Length=141, Percent_Identity=38.2978723404255, Blast_Score=78, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17554212, Length=132, Percent_Identity=42.4242424242424, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI212645194, Length=113, Percent_Identity=38.0530973451327, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71981154, Length=89, Percent_Identity=39.3258426966292, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71981141, Length=89, Percent_Identity=39.3258426966292, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17535267, Length=89, Percent_Identity=39.3258426966292, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI212646033, Length=127, Percent_Identity=34.6456692913386, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI212646031, Length=127, Percent_Identity=34.6456692913386, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI212646035, Length=120, Percent_Identity=35, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17540144, Length=81, Percent_Identity=41.9753086419753, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193203261, Length=96, Percent_Identity=37.5, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71981147, Length=89, Percent_Identity=39.3258426966292, Blast_Score=62, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322079, Length=110, Percent_Identity=40, Blast_Score=66, Evalue=2e-12, Organism=Drosophila melanogaster, GI161082096, Length=135, Percent_Identity=37.7777777777778, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI161082110, Length=135, Percent_Identity=37.7777777777778, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI161082081, Length=135, Percent_Identity=37.7777777777778, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI161082106, Length=135, Percent_Identity=37.7777777777778, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI161082089, Length=135, Percent_Identity=37.7777777777778, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI161082092, Length=135, Percent_Identity=37.7777777777778, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI161082085, Length=136, Percent_Identity=37.5, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI161082099, Length=136, Percent_Identity=37.5, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI221472807, Length=118, Percent_Identity=39.8305084745763, Blast_Score=79, Evalue=8e-16, Organism=Drosophila melanogaster, GI45552223, Length=114, Percent_Identity=40.3508771929825, Blast_Score=79, Evalue=9e-16, Organism=Drosophila melanogaster, GI17998549, Length=118, Percent_Identity=39.8305084745763, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI281359521, Length=128, Percent_Identity=40.625, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI281359519, Length=128, Percent_Identity=40.625, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI28558752, Length=128, Percent_Identity=40.625, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI28558750, Length=128, Percent_Identity=40.625, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI28558756, Length=128, Percent_Identity=40.625, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI28558754, Length=128, Percent_Identity=40.625, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24581260, Length=130, Percent_Identity=37.6923076923077, Blast_Score=76, Evalue=6e-15, Organism=Drosophila melanogaster, GI24581258, Length=130, Percent_Identity=37.6923076923077, Blast_Score=76, Evalue=6e-15, Organism=Drosophila melanogaster, GI24639454, Length=100, Percent_Identity=44, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI221330480, Length=115, Percent_Identity=36.5217391304348, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI221330474, Length=115, Percent_Identity=36.5217391304348, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI221330478, Length=115, Percent_Identity=36.5217391304348, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI221330482, Length=115, Percent_Identity=36.5217391304348, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24650843, Length=95, Percent_Identity=43.1578947368421, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573593, Length=115, Percent_Identity=36.5217391304348, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI45551135, Length=137, Percent_Identity=32.1167883211679, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI45550479, Length=115, Percent_Identity=36.5217391304348, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI221330476, Length=115, Percent_Identity=36.5217391304348, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI281363919, Length=115, Percent_Identity=36.5217391304348, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI28571867, Length=98, Percent_Identity=39.7959183673469, Blast_Score=69, Evalue=9e-13, Organism=Drosophila melanogaster, GI28571865, Length=98, Percent_Identity=39.7959183673469, Blast_Score=69, Evalue=9e-13, Organism=Drosophila melanogaster, GI24667933, Length=130, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI28573674, Length=90, Percent_Identity=43.3333333333333, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI45550477, Length=90, Percent_Identity=43.3333333333333, Blast_Score=66, Evalue=6e-12, Organism=Drosophila melanogaster, GI161084152, Length=109, Percent_Identity=36.697247706422, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI281366286, Length=109, Percent_Identity=36.697247706422, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI161084156, Length=109, Percent_Identity=36.697247706422, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI281366284, Length=89, Percent_Identity=39.3258426966292, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI281366282, Length=89, Percent_Identity=39.3258426966292, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24583835, Length=131, Percent_Identity=31.2977099236641, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR007685 [H]
Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]
EC number: NA
Molecular weight: Translated: 14764; Mature: 14764
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENVNAKDRNGHTLLISASKQGQIDSVKDLLHRGADITASSDKGKTALHYAAANGNTEIV CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEECCCCCCEEEEEEECCCCHHHH KMLIEKGAEIDARDRDGHTPLMLAAIYGCNLTVQALLEGGADPRAKTKCGNTAVLYAENN HHHHHCCCCCCCCCCCCCCCEEEEEHHCCCCEEEHHHCCCCCCCCCCCCCCEEEEEEECC SHPVAATLLKKAERSKAGNA CCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MENVNAKDRNGHTLLISASKQGQIDSVKDLLHRGADITASSDKGKTALHYAAANGNTEIV CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEECCCCCCEEEEEEECCCCHHHH KMLIEKGAEIDARDRDGHTPLMLAAIYGCNLTVQALLEGGADPRAKTKCGNTAVLYAENN HHHHHCCCCCCCCCCCCCCCEEEEEHHCCCCEEEHHHCCCCCCCCCCCCCCEEEEEEECC SHPVAATLLKKAERSKAGNA CCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA