| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423756
Identifier: 189423756
GI number: 189423756
Start: 696073
End: 696876
Strand: Reverse
Name: 189423756
Synonym: Glov_0687
Alternate gene names: NA
Gene position: 696876-696073 (Counterclockwise)
Preceding gene: 189423757
Following gene: 189423754
Centisome position: 17.79
GC content: 54.98
Gene sequence:
>804_bases ATGCTGACTGACATCATCGTACATATGGACAGGGGAGCGGGATGTACAGCCAGATTGATGGCTGCCATAGATCTGGCCTC TCGTCACGGTGGGCGACTGAAGGGGCTGTATGTCATTACCCACCCCCATTACACCTCAAGCTCGTCATACCTGTCCGACT TCGCCCAAGTGAGGGAGTTCTTCGTCAATGCCACCTCAAAAGCCGGGATTGAAACGGAATGGCTGTTGGTTGACTGGAAT ACGGTTGGAACACCGCTCGCTGAAATTGTTACCAATCACAGCCACTATGCCGACACGATACTGGTTGGACAACCGACCCA ACTGCATAGCCGCAGGACAAACCTTGATTTTCACGAGCGCCTGATTCTCGGTGCGGGACGGCCGATTGTGGTATTCCCTG GCAGTGGCGACATCTTCCAGTTTGGTGAGAGAGTCTTGGTGGCATGGAAAGCCGGCAGGGAGTCGGTCAGGGCAGTCAAC GACGCCCTGCCGTTTCTTCAGGCTGCTACAGATATCAGCATTGTTGCAATGGTCACGAGCCACGATAACCGGGCACGGGA AGAGCAGCCCATCAACCTGCTGCAACAGCACCTTGCACGCCACCACGTAAAGGCCGCCACAGAAATCATAGTCATTCAGA AAGGCAATGCGGCAGAGGCACTTCTGGAGCAGGCCCGCCAGAAAAAAGCGGACCTGATTGTGGTAGGCGGCTTCAGCTAC AAATCAAACAGGGCACCGGTATTAAGCCCGTTCACACAGGAACTGCTGCTCAAAGCACCGGTGCCGCTGCTCATCTCGCA CTAA
Upstream 100 bases:
>100_bases ATCTGATCATCACCTATCACGCCAAGGATGTGGCACGCTGGCTGAAAGGCGGCATCTAGGCTCTGGTTCGCTTGCAACAA ACGCAGTACAGGGTGCAGGG
Downstream 100 bases:
>100_bases GAACCGTTTACTCTTTCAAACGTTCTTCCATCTCACGCTTTTGTTTGCGCAATGTCCCCTCTTCAGAAGCGGCAGGGATC TGACGCTCCGGCAACTTGTT
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MLTDIIVHMDRGAGCTARLMAAIDLASRHGGRLKGLYVITHPHYTSSSSYLSDFAQVREFFVNATSKAGIETEWLLVDWN TVGTPLAEIVTNHSHYADTILVGQPTQLHSRRTNLDFHERLILGAGRPIVVFPGSGDIFQFGERVLVAWKAGRESVRAVN DALPFLQAATDISIVAMVTSHDNRAREEQPINLLQQHLARHHVKAATEIIVIQKGNAAEALLEQARQKKADLIVVGGFSY KSNRAPVLSPFTQELLLKAPVPLLISH
Sequences:
>Translated_267_residues MLTDIIVHMDRGAGCTARLMAAIDLASRHGGRLKGLYVITHPHYTSSSSYLSDFAQVREFFVNATSKAGIETEWLLVDWN TVGTPLAEIVTNHSHYADTILVGQPTQLHSRRTNLDFHERLILGAGRPIVVFPGSGDIFQFGERVLVAWKAGRESVRAVN DALPFLQAATDISIVAMVTSHDNRAREEQPINLLQQHLARHHVKAATEIIVIQKGNAAEALLEQARQKKADLIVVGGFSY KSNRAPVLSPFTQELLLKAPVPLLISH >Mature_267_residues MLTDIIVHMDRGAGCTARLMAAIDLASRHGGRLKGLYVITHPHYTSSSSYLSDFAQVREFFVNATSKAGIETEWLLVDWN TVGTPLAEIVTNHSHYADTILVGQPTQLHSRRTNLDFHERLILGAGRPIVVFPGSGDIFQFGERVLVAWKAGRESVRAVN DALPFLQAATDISIVAMVTSHDNRAREEQPINLLQQHLARHHVKAATEIIVIQKGNAAEALLEQARQKKADLIVVGGFSY KSNRAPVLSPFTQELLLKAPVPLLISH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29405; Mature: 29405
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTDIIVHMDRGAGCTARLMAAIDLASRHGGRLKGLYVITHPHYTSSSSYLSDFAQVREF CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH FVNATSKAGIETEWLLVDWNTVGTPLAEIVTNHSHYADTILVGQPTQLHSRRTNLDFHER HHCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHCCCCCHHHH LILGAGRPIVVFPGSGDIFQFGERVLVAWKAGRESVRAVNDALPFLQAATDISIVAMVTS HEEECCCEEEEECCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEEEC HDNRAREEQPINLLQQHLARHHVKAATEIIVIQKGNAAEALLEQARQKKADLIVVGGFSY CCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCC KSNRAPVLSPFTQELLLKAPVPLLISH CCCCCCCCCHHHHHHHHHCCCCEEECC >Mature Secondary Structure MLTDIIVHMDRGAGCTARLMAAIDLASRHGGRLKGLYVITHPHYTSSSSYLSDFAQVREF CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH FVNATSKAGIETEWLLVDWNTVGTPLAEIVTNHSHYADTILVGQPTQLHSRRTNLDFHER HHCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCEEEECCCHHHHHHCCCCCHHHH LILGAGRPIVVFPGSGDIFQFGERVLVAWKAGRESVRAVNDALPFLQAATDISIVAMVTS HEEECCCEEEEECCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEEEC HDNRAREEQPINLLQQHLARHHVKAATEIIVIQKGNAAEALLEQARQKKADLIVVGGFSY CCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCC KSNRAPVLSPFTQELLLKAPVPLLISH CCCCCCCCCHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA