| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is gltX
Identifier: 189423654
GI number: 189423654
Start: 572101
End: 573501
Strand: Reverse
Name: gltX
Synonym: Glov_0584
Alternate gene names: 189423654
Gene position: 573501-572101 (Counterclockwise)
Preceding gene: 189423668
Following gene: 189423653
Centisome position: 14.64
GC content: 60.67
Gene sequence:
>1401_bases ATGTCTGATCTGCGCGTTCGCTTTGCCCCTTCGCCCACCGGCTACCTGCATGTTGGCGGTGCCCGCACCGCCCTGTTCAA CTGGCTATACGCCCGTCATTTCGGCGGCACCTTTATCCTGCGGATCGAAGATACCGACACTGAGCGTTCCACCCAGCAAT CGGTGGATGCCATTCTGCAGGGGATGGAGTGGCTGGGGCTGGACTGGGATGAAGGGCCGTTCTACCAGACCGATAACTTT CCGCTCTACAAGCAGCATGTCCAGAAGCTGCTGGATGAAGGCAAGGCCTACCGTTGCTGGTGCAGACCGGAGGAGCTGGA GGCCAAGCGTGAGGCGGCCATGGCCGAGGGGCGCAAGCCCAAGTACGACGGCACCTGCCGCCACCGTCAGGACCAGCCGC TGGATCAACCCCACGTCATCCGCTTCAAGGCCCCGGAAGAGGGAGAAACAGCCTTTGACGACCTGATCAAGGGCAGGATC GCCTTCCCCAATGCCGAGCTGGATGATCTGATCATCAGCCGCACCGACGGCACCCCCACCTACAACTTCTGTGTGGTGAT CGATGATGCCCTGATGCGGATCTCCCACGTCATCCGGGGCGACGACCATGTCAACAACACCCCGCGCCAGATCCAGTTGT ATGAGGCATTGGGCTATCCGGTGCCGATCTTCGCCCATGTGCCGATGATTCTGGGCAGCGACAAGGCCCGGCTTTCCAAA CGACATGGTGCCACCAGCGTGATCGCCTACCGTGATATGGGCTACCTGCCGGAGGCGCTGAACAACTATCTGGTACGGCT GGGCTGGAGTAACGGCGATGATGAAATTTTCAGCCGTGAGGAGATGGTGCAGAAGTTTGATATCGCCAATGTGGGCCGTT CCCCCTCGGTCTTCAACCCGGACAAACTGAACTGGCTGAACGCCCATTACATCAAAACCGGCAACCCCGCCCGGCTGGCT GAACTACTGCAACCCCATCTGGCAGGCCGTGGTGTGGCGGACTGTTCAACCCCTGATCTGGCCGGCGTCATCAGCACCCT GCAGGAGCGGGCCCAGACCCTGGAAGAGATGGCCGAGCGGGCCTTGTTCTACTACCAGGCACCGCAACAGTATGACGAGG CGGCCCTGAGCAAGTTTGACAAACCGCATCTGGCAGCAGTCTTTAGCGCTGTTGCGGCCAGGCTCTCTGCAACAACCGCT GCTGCCGCACCGGAGTTCGATACGCTGCTGAAGGAGATTTGCGCCGAAGGCGGATGGAAGATGCCCCATGTCGGTCAGCC TCTGCGGATCGCCCTGTCCGGCAGCACCCAGGCACCCGGCATCGGCGAGATCATCACGGCCCTGGGAGTTAACGAGACGA TTGCACGTATTGAACGGGCCAGAGAGTTCCTGGCACACTGA
Upstream 100 bases:
>100_bases CCCCGGCCCAGACCTTAACAATGCTTGACAAGTAGATGCCTGATAAGGCTTATTTCATTACACGGCATGACTTAGGAATT ATTCTACAGGAGCTTTACCG
Downstream 100 bases:
>100_bases CGGTCTGCGGTTTTCGGGGCGACAGGGTGGGAGACCCATGGATATACTTGCCATAACTGACATACCGCGTATGACTGCAC TGTTTGAACGGCTTGCCCGG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSDLRVRFAPSPTGYLHVGGARTALFNWLYARHFGGTFILRIEDTDTERSTQQSVDAILQGMEWLGLDWDEGPFYQTDNF PLYKQHVQKLLDEGKAYRCWCRPEELEAKREAAMAEGRKPKYDGTCRHRQDQPLDQPHVIRFKAPEEGETAFDDLIKGRI AFPNAELDDLIISRTDGTPTYNFCVVIDDALMRISHVIRGDDHVNNTPRQIQLYEALGYPVPIFAHVPMILGSDKARLSK RHGATSVIAYRDMGYLPEALNNYLVRLGWSNGDDEIFSREEMVQKFDIANVGRSPSVFNPDKLNWLNAHYIKTGNPARLA ELLQPHLAGRGVADCSTPDLAGVISTLQERAQTLEEMAERALFYYQAPQQYDEAALSKFDKPHLAAVFSAVAARLSATTA AAAPEFDTLLKEICAEGGWKMPHVGQPLRIALSGSTQAPGIGEIITALGVNETIARIERAREFLAH
Sequences:
>Translated_466_residues MSDLRVRFAPSPTGYLHVGGARTALFNWLYARHFGGTFILRIEDTDTERSTQQSVDAILQGMEWLGLDWDEGPFYQTDNF PLYKQHVQKLLDEGKAYRCWCRPEELEAKREAAMAEGRKPKYDGTCRHRQDQPLDQPHVIRFKAPEEGETAFDDLIKGRI AFPNAELDDLIISRTDGTPTYNFCVVIDDALMRISHVIRGDDHVNNTPRQIQLYEALGYPVPIFAHVPMILGSDKARLSK RHGATSVIAYRDMGYLPEALNNYLVRLGWSNGDDEIFSREEMVQKFDIANVGRSPSVFNPDKLNWLNAHYIKTGNPARLA ELLQPHLAGRGVADCSTPDLAGVISTLQERAQTLEEMAERALFYYQAPQQYDEAALSKFDKPHLAAVFSAVAARLSATTA AAAPEFDTLLKEICAEGGWKMPHVGQPLRIALSGSTQAPGIGEIITALGVNETIARIERAREFLAH >Mature_465_residues SDLRVRFAPSPTGYLHVGGARTALFNWLYARHFGGTFILRIEDTDTERSTQQSVDAILQGMEWLGLDWDEGPFYQTDNFP LYKQHVQKLLDEGKAYRCWCRPEELEAKREAAMAEGRKPKYDGTCRHRQDQPLDQPHVIRFKAPEEGETAFDDLIKGRIA FPNAELDDLIISRTDGTPTYNFCVVIDDALMRISHVIRGDDHVNNTPRQIQLYEALGYPVPIFAHVPMILGSDKARLSKR HGATSVIAYRDMGYLPEALNNYLVRLGWSNGDDEIFSREEMVQKFDIANVGRSPSVFNPDKLNWLNAHYIKTGNPARLAE LLQPHLAGRGVADCSTPDLAGVISTLQERAQTLEEMAERALFYYQAPQQYDEAALSKFDKPHLAAVFSAVAARLSATTAA AAPEFDTLLKEICAEGGWKMPHVGQPLRIALSGSTQAPGIGEIITALGVNETIARIERAREFLAH
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=494, Percent_Identity=30.7692307692308, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI62241042, Length=255, Percent_Identity=25.4901960784314, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI4826960, Length=297, Percent_Identity=24.5791245791246, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1788743, Length=463, Percent_Identity=51.8358531317495, Blast_Score=500, Evalue=1e-143, Organism=Escherichia coli, GI226510925, Length=242, Percent_Identity=34.297520661157, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI1786895, Length=333, Percent_Identity=23.7237237237237, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71993394, Length=486, Percent_Identity=31.6872427983539, Blast_Score=223, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6324540, Length=492, Percent_Identity=32.7235772357724, Blast_Score=272, Evalue=9e-74, Organism=Saccharomyces cerevisiae, GI6321192, Length=232, Percent_Identity=28.0172413793103, Blast_Score=97, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6324742, Length=218, Percent_Identity=30.7339449541284, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI24665321, Length=489, Percent_Identity=33.1288343558282, Blast_Score=278, Evalue=8e-75, Organism=Drosophila melanogaster, GI24649466, Length=229, Percent_Identity=27.5109170305677, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI17864488, Length=306, Percent_Identity=25.4901960784314, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_GEOLS (B3E399)
Other databases:
- EMBL: CP001089 - RefSeq: YP_001950831.1 - ProteinModelPortal: B3E399 - SMR: B3E399 - GeneID: 6367962 - GenomeReviews: CP001089_GR - KEGG: glo:Glov_0584 - HOGENOM: HBG628189 - OMA: MAHIPLI - ProtClustDB: PRK01406 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 52156; Mature: 52024
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 240-240
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLRVRFAPSPTGYLHVGGARTALFNWLYARHFGGTFILRIEDTDTERSTQQSVDAILQ CCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHH GMEWLGLDWDEGPFYQTDNFPLYKQHVQKLLDEGKAYRCWCRPEELEAKREAAMAEGRKP CHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCC KYDGTCRHRQDQPLDQPHVIRFKAPEEGETAFDDLIKGRIAFPNAELDDLIISRTDGTPT CCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCEECCCCCCCHHEEECCCCCCC YNFCVVIDDALMRISHVIRGDDHVNNTPRQIQLYEALGYPVPIFAHVPMILGSDKARLSK EEEEEEEHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHCCCCCHHHHCCHHCCCCHHHHHH RHGATSVIAYRDMGYLPEALNNYLVRLGWSNGDDEIFSREEMVQKFDIANVGRSPSVFNP HCCCCEEEEECCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC DKLNWLNAHYIKTGNPARLAELLQPHLAGRGVADCSTPDLAGVISTLQERAQTLEEMAER CCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALFYYQAPQQYDEAALSKFDKPHLAAVFSAVAARLSATTAAAAPEFDTLLKEICAEGGWK HHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC MPHVGQPLRIALSGSTQAPGIGEIITALGVNETIARIERAREFLAH CCCCCCCEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SDLRVRFAPSPTGYLHVGGARTALFNWLYARHFGGTFILRIEDTDTERSTQQSVDAILQ CCCEEEECCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHH GMEWLGLDWDEGPFYQTDNFPLYKQHVQKLLDEGKAYRCWCRPEELEAKREAAMAEGRKP CHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCC KYDGTCRHRQDQPLDQPHVIRFKAPEEGETAFDDLIKGRIAFPNAELDDLIISRTDGTPT CCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCEECCCCCCCHHEEECCCCCCC YNFCVVIDDALMRISHVIRGDDHVNNTPRQIQLYEALGYPVPIFAHVPMILGSDKARLSK EEEEEEEHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHCCCCCHHHHCCHHCCCCHHHHHH RHGATSVIAYRDMGYLPEALNNYLVRLGWSNGDDEIFSREEMVQKFDIANVGRSPSVFNP HCCCCEEEEECCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC DKLNWLNAHYIKTGNPARLAELLQPHLAGRGVADCSTPDLAGVISTLQERAQTLEEMAER CCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALFYYQAPQQYDEAALSKFDKPHLAAVFSAVAARLSATTAAAAPEFDTLLKEICAEGGWK HHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC MPHVGQPLRIALSGSTQAPGIGEIITALGVNETIARIERAREFLAH CCCCCCCEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA