| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is 189423653
Identifier: 189423653
GI number: 189423653
Start: 570777
End: 572063
Strand: Reverse
Name: 189423653
Synonym: Glov_0583
Alternate gene names: NA
Gene position: 572063-570777 (Counterclockwise)
Preceding gene: 189423654
Following gene: 189423649
Centisome position: 14.6
GC content: 58.97
Gene sequence:
>1287_bases ATGGATATACTTGCCATAACTGACATACCGCGTATGACTGCACTGTTTGAACGGCTTGCCCGGCAGATCCCCGGCCTGAC CGTGGTCAGCGAGATCCACCGCGGCATCGAAGAGCTTGAGAGCCGTAAGCCCGAGCTGGTTTTCATCCAGAATCACCTGG CAGGTCTGTCGGCCGACATTCTGCATAAACATCTGAAGTCGCGGCTGGGACAACGCACGGCACGCTTCGGGCTGATCAGC GCACCAAGCGCCATTGATAGCGATAGTTCCGCAGTGTTTGAAATCATACTTGACCCTGCCCTGAGTGATGAAGAGCTGGA ACAGGCCCTCCTGAGCCTCCTGCAACAGCAGGATCAGCCGGCAAAGCCGATCGCAACCCAAGAACAGACTACGGTGCCAC AGCCAGGCTCCCCGGAACAGGAACCGCCCGGGCTGCTGACGCGACCGCCGGTTTTTCCTCCGCAGAACGTTCAACAGCAA CTGTCACTCATGCCGGACCCGCCGGTTCCGGTTGAATCCGACCAGACACCGGCAGCGCCGCTGACCTATGAACTGCCCCG GCGGCCCGGCATCTCAATCATTTCCGATTTCAGCAAACAGCTTGATACCCGATCCGACACCCTGCAGCCCGACCCTGCAC CGTTTAACCGACATGAGCATGAACTGCGTATCCGGGATCTGCATCAGGAACCGCATCTGATCAGTGACTTTGAGCCGTCA CAGCCCTGGTACCGCAAAACCGCCTTCCTGCTGGTCAGCGGCACCCTGCTGGTTGTTGTGGCGGTAAGCCTGTTCCAACA CCGTTCAAGCCGGACAGCACCGGCTTCCAAGGCCACTTCAGAACAAAAGGCACCGGCAGCAGCTCCAACTCCGCCGGCTG TGGCTCCTCAGCCGGAAAAGAAACCGGCGTTTTCCTCCCATGGCAGCGGGCGTCCCCGCAGCCTGCCCTCCTTTATCCCC AAAGAAGGGCTGGACCCCGGCTATGGCAAAGACAATCCGGGCTGGGAGAACTATCGCGGCCAAACCAATGAATATCGTGT CTTCCGCGAAAAAGACGGCGCAATCAAGGCCATTCAGGTCATTGACCGCAGTGGGGCAGGCATCCAGGAATCCTTCTATA CCAGCACCCTGAAAGAGTTGGCCGGTGCAACGGCAATGCGGTCAACCTCTTCCGAGATCAAGGAGGGCTATGAGATCCGC AGGGGTGATCTGGCCGGTCTGCAGCTGGTACAATACCGGGATGCCCAGGGGGGCAGGATGCGGGGCTTTGTGATTACCTG GCCGTAA
Upstream 100 bases:
>100_bases GCCCTGGGAGTTAACGAGACGATTGCACGTATTGAACGGGCCAGAGAGTTCCTGGCACACTGACGGTCTGCGGTTTTCGG GGCGACAGGGTGGGAGACCC
Downstream 100 bases:
>100_bases CTCCGATTCCATTTCAAGGCCCTCTCGTCGTTGGCTCGCCTTCGGCTCCTCAACGTACTGCGTGTACGCCTACGTCGCCG AATTCCTCGCCGCCTGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MDILAITDIPRMTALFERLARQIPGLTVVSEIHRGIEELESRKPELVFIQNHLAGLSADILHKHLKSRLGQRTARFGLIS APSAIDSDSSAVFEIILDPALSDEELEQALLSLLQQQDQPAKPIATQEQTTVPQPGSPEQEPPGLLTRPPVFPPQNVQQQ LSLMPDPPVPVESDQTPAAPLTYELPRRPGISIISDFSKQLDTRSDTLQPDPAPFNRHEHELRIRDLHQEPHLISDFEPS QPWYRKTAFLLVSGTLLVVVAVSLFQHRSSRTAPASKATSEQKAPAAAPTPPAVAPQPEKKPAFSSHGSGRPRSLPSFIP KEGLDPGYGKDNPGWENYRGQTNEYRVFREKDGAIKAIQVIDRSGAGIQESFYTSTLKELAGATAMRSTSSEIKEGYEIR RGDLAGLQLVQYRDAQGGRMRGFVITWP
Sequences:
>Translated_428_residues MDILAITDIPRMTALFERLARQIPGLTVVSEIHRGIEELESRKPELVFIQNHLAGLSADILHKHLKSRLGQRTARFGLIS APSAIDSDSSAVFEIILDPALSDEELEQALLSLLQQQDQPAKPIATQEQTTVPQPGSPEQEPPGLLTRPPVFPPQNVQQQ LSLMPDPPVPVESDQTPAAPLTYELPRRPGISIISDFSKQLDTRSDTLQPDPAPFNRHEHELRIRDLHQEPHLISDFEPS QPWYRKTAFLLVSGTLLVVVAVSLFQHRSSRTAPASKATSEQKAPAAAPTPPAVAPQPEKKPAFSSHGSGRPRSLPSFIP KEGLDPGYGKDNPGWENYRGQTNEYRVFREKDGAIKAIQVIDRSGAGIQESFYTSTLKELAGATAMRSTSSEIKEGYEIR RGDLAGLQLVQYRDAQGGRMRGFVITWP >Mature_428_residues MDILAITDIPRMTALFERLARQIPGLTVVSEIHRGIEELESRKPELVFIQNHLAGLSADILHKHLKSRLGQRTARFGLIS APSAIDSDSSAVFEIILDPALSDEELEQALLSLLQQQDQPAKPIATQEQTTVPQPGSPEQEPPGLLTRPPVFPPQNVQQQ LSLMPDPPVPVESDQTPAAPLTYELPRRPGISIISDFSKQLDTRSDTLQPDPAPFNRHEHELRIRDLHQEPHLISDFEPS QPWYRKTAFLLVSGTLLVVVAVSLFQHRSSRTAPASKATSEQKAPAAAPTPPAVAPQPEKKPAFSSHGSGRPRSLPSFIP KEGLDPGYGKDNPGWENYRGQTNEYRVFREKDGAIKAIQVIDRSGAGIQESFYTSTLKELAGATAMRSTSSEIKEGYEIR RGDLAGLQLVQYRDAQGGRMRGFVITWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47229; Mature: 47229
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILAITDIPRMTALFERLARQIPGLTVVSEIHRGIEELESRKPELVFIQNHLAGLSADI CCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHCCCCHHH LHKHLKSRLGQRTARFGLISAPSAIDSDSSAVFEIILDPALSDEELEQALLSLLQQQDQP HHHHHHHHHHHHHHHHCCEECCCCCCCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHCCCC AKPIATQEQTTVPQPGSPEQEPPGLLTRPPVFPPQNVQQQLSLMPDPPVPVESDQTPAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC LTYELPRRPGISIISDFSKQLDTRSDTLQPDPAPFNRHEHELRIRDLHQEPHLISDFEPS CEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC QPWYRKTAFLLVSGTLLVVVAVSLFQHRSSRTAPASKATSEQKAPAAAPTPPAVAPQPEK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHCCCCCCCCCCCCCCCCCC KPAFSSHGSGRPRSLPSFIPKEGLDPGYGKDNPGWENYRGQTNEYRVFREKDGAIKAIQV CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHH IDRSGAGIQESFYTSTLKELAGATAMRSTSSEIKEGYEIRRGDLAGLQLVQYRDAQGGRM HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHEEHEEEECCCCCEE RGFVITWP EEEEEECC >Mature Secondary Structure MDILAITDIPRMTALFERLARQIPGLTVVSEIHRGIEELESRKPELVFIQNHLAGLSADI CCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHCCCCHHH LHKHLKSRLGQRTARFGLISAPSAIDSDSSAVFEIILDPALSDEELEQALLSLLQQQDQP HHHHHHHHHHHHHHHHCCEECCCCCCCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHCCCC AKPIATQEQTTVPQPGSPEQEPPGLLTRPPVFPPQNVQQQLSLMPDPPVPVESDQTPAAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC LTYELPRRPGISIISDFSKQLDTRSDTLQPDPAPFNRHEHELRIRDLHQEPHLISDFEPS CEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC QPWYRKTAFLLVSGTLLVVVAVSLFQHRSSRTAPASKATSEQKAPAAAPTPPAVAPQPEK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHCCCCCCCCCCCCCCCCCC KPAFSSHGSGRPRSLPSFIPKEGLDPGYGKDNPGWENYRGQTNEYRVFREKDGAIKAIQV CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHH IDRSGAGIQESFYTSTLKELAGATAMRSTSSEIKEGYEIRRGDLAGLQLVQYRDAQGGRM HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHEEHEEEECCCCCEE RGFVITWP EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA