| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423586
Identifier: 189423586
GI number: 189423586
Start: 486971
End: 487867
Strand: Reverse
Name: 189423586
Synonym: Glov_0515
Alternate gene names: NA
Gene position: 487867-486971 (Counterclockwise)
Preceding gene: 189423587
Following gene: 189423585
Centisome position: 12.45
GC content: 59.09
Gene sequence:
>897_bases ATGCAGAACTGCATTGCACCAACCCCGCTGGACGGGATCAGCTACTTTCAACCTCCTGTAGATTTCCACATCACCGGTCG TGATGGCCGGGTCAACATCCCGTGGGAATTTCCGATACCGCTGGTGGAAGAGAGCTACCGTGCCGCCCTTGAACATGGCG CTCCCGATTACGATCAGGTTGGCCAGGGAATGTTCTTTGCCCTGCGCCAGAACCCGGACTGCACCTACGCAGTTGATTAT GCGCGGGTGTTGCAGACAGGTTACCCCCACATCATTGCCGAGATCGGTGGCGAGGCGATCATGCTGGATGCAAAAGAGGT TGACTCCCCTTACCTGGATCGCAAGGTCAACCTGCTGAAGATCATGGCCCTGCTGGAGCAGGATAATGCCGGCCTGTGGC GGGAGATCGGCCGGACCCTGATGGAAAAAGGAAGCCGGATGGAGGCTGCCCACCTGGCGGTGCAGTCCTGGTACGGTGCA GAAAAATACCTGAGCCGTTCGGTTGAACTGGCCCCGGATGACCTGCATACCTGCTACCAGCTGGGAGAAACCCACTATGT GCTGGGCCACTATGACCAGGCACTGGCCTTGTGGCAACCGCTGGTTGAGCGGCTGCAGGCTGGCGAGCGCCTTAGTCTTG AAGCCCGTATTGCCGCTATTCAGCGTGGTGAACTGCCCAAGGTGCCGGCGGTGGACTACCTGACCGCCCTCTCGGTTGCC TTTGAGCAGCACCAGGATGACCAGTTCTATGAGGCGGCGGCCATTGTGGAGGATGTACTGCTGGACACGGTCTTCTGCGC CCAGTTCCCGATGGCTGGCGTCTACCGCTTTCTCGAGCAGTGCTATCGGGCGGTCAACATGACCGACAAGGCTGATGCCT TGAAAGGACGGTGCTAG
Upstream 100 bases:
>100_bases TCCTGGATGAACCCTGGGATGAAATACGTATCTACAAAATGATCGGCGTTGATGCCGGGTTGAACACCTTCCCGGGCCGC CAGTCTGAGGAGCATCACTA
Downstream 100 bases:
>100_bases ATGTTCGGCTTCAGCACCGCCGACTGGCTGTTTATCGGTTTTATCCTGCTGGTGATCGCCTTTTGCGTCGGGATCAGCGA TATGCGAAAAAAGAAGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Domain Protein
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MQNCIAPTPLDGISYFQPPVDFHITGRDGRVNIPWEFPIPLVEESYRAALEHGAPDYDQVGQGMFFALRQNPDCTYAVDY ARVLQTGYPHIIAEIGGEAIMLDAKEVDSPYLDRKVNLLKIMALLEQDNAGLWREIGRTLMEKGSRMEAAHLAVQSWYGA EKYLSRSVELAPDDLHTCYQLGETHYVLGHYDQALALWQPLVERLQAGERLSLEARIAAIQRGELPKVPAVDYLTALSVA FEQHQDDQFYEAAAIVEDVLLDTVFCAQFPMAGVYRFLEQCYRAVNMTDKADALKGRC
Sequences:
>Translated_298_residues MQNCIAPTPLDGISYFQPPVDFHITGRDGRVNIPWEFPIPLVEESYRAALEHGAPDYDQVGQGMFFALRQNPDCTYAVDY ARVLQTGYPHIIAEIGGEAIMLDAKEVDSPYLDRKVNLLKIMALLEQDNAGLWREIGRTLMEKGSRMEAAHLAVQSWYGA EKYLSRSVELAPDDLHTCYQLGETHYVLGHYDQALALWQPLVERLQAGERLSLEARIAAIQRGELPKVPAVDYLTALSVA FEQHQDDQFYEAAAIVEDVLLDTVFCAQFPMAGVYRFLEQCYRAVNMTDKADALKGRC >Mature_298_residues MQNCIAPTPLDGISYFQPPVDFHITGRDGRVNIPWEFPIPLVEESYRAALEHGAPDYDQVGQGMFFALRQNPDCTYAVDY ARVLQTGYPHIIAEIGGEAIMLDAKEVDSPYLDRKVNLLKIMALLEQDNAGLWREIGRTLMEKGSRMEAAHLAVQSWYGA EKYLSRSVELAPDDLHTCYQLGETHYVLGHYDQALALWQPLVERLQAGERLSLEARIAAIQRGELPKVPAVDYLTALSVA FEQHQDDQFYEAAAIVEDVLLDTVFCAQFPMAGVYRFLEQCYRAVNMTDKADALKGRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33578; Mature: 33578
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNCIAPTPLDGISYFQPPVDFHITGRDGRVNIPWEFPIPLVEESYRAALEHGAPDYDQV CCCCCCCCCCCCCHHCCCCCCEEEECCCCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHH GQGMFFALRQNPDCTYAVDYARVLQTGYPHIIAEIGGEAIMLDAKEVDSPYLDRKVNLLK CCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHH IMALLEQDNAGLWREIGRTLMEKGSRMEAAHLAVQSWYGAEKYLSRSVELAPDDLHTCYQ HHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHH LGETHYVLGHYDQALALWQPLVERLQAGERLSLEARIAAIQRGELPKVPAVDYLTALSVA HCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH FEQHQDDQFYEAAAIVEDVLLDTVFCAQFPMAGVYRFLEQCYRAVNMTDKADALKGRC HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCC >Mature Secondary Structure MQNCIAPTPLDGISYFQPPVDFHITGRDGRVNIPWEFPIPLVEESYRAALEHGAPDYDQV CCCCCCCCCCCCCHHCCCCCCEEEECCCCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHH GQGMFFALRQNPDCTYAVDYARVLQTGYPHIIAEIGGEAIMLDAKEVDSPYLDRKVNLLK CCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHH IMALLEQDNAGLWREIGRTLMEKGSRMEAAHLAVQSWYGAEKYLSRSVELAPDDLHTCYQ HHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHH LGETHYVLGHYDQALALWQPLVERLQAGERLSLEARIAAIQRGELPKVPAVDYLTALSVA HCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH FEQHQDDQFYEAAAIVEDVLLDTVFCAQFPMAGVYRFLEQCYRAVNMTDKADALKGRC HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA