| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423587
Identifier: 189423587
GI number: 189423587
Start: 487867
End: 488712
Strand: Reverse
Name: 189423587
Synonym: Glov_0516
Alternate gene names: NA
Gene position: 488712-487867 (Counterclockwise)
Preceding gene: 189423588
Following gene: 189423586
Centisome position: 12.47
GC content: 59.46
Gene sequence:
>846_bases ATGCCGAAGCTGCCGGGAAACAGCCCGATGCTTGGCCGGCATGGCCACGCGCTGACCTCACTGGCGGCCATCAACCGGCT GGATACACCGGAAAAAGAAGCGATCTATGCCGGTCTGTTGCCAGGGCGCCTCTTGCAACTTCTGCAGCTTGACCCCGGCA CGCTCTGCACTCCGGCAGAAGAGCGGCTGGTAGAGATAATCGCCCCGGACGGACTGAGTTTTGCCAGGATTGAGGTGCGC GCCCGGCCGGAAGATACTGACGTCGTTTTTTTTGCTGAACTGAGTGATACGCAATTTCACCAGATGGAGCTGGCTTTCTG CATCATCTGCGATCCGTCAGCTCCGCGCTTTGCGGTTGACGTAAACGAAGCCGGGGCGGTAAACTACTTCTCTTCCAACG GCAGGAACCTGCCGGAGGAACTACGGGCCATGCAGGCCGGACTGTTTCCGCACCAGACCAGACGGGGACTGCGGATGTTC GGCGAGTTTTTCGCTTTGGCCGAACGGTTCACCGACCGCCTGGGGATGGAGATGATCGTTGCCGAGCCGCTCTCCTACGA CAACGCCATCCGTTATGAACGTTACGGCTTTGACTACCTGACCGGCAAGCGCTTGATGCTGGAGATTGACCGTGAGTTCC AGCCCGGTGGCAGGCTGCACCGTCGGCTGGACGGTTCCAGCCCGTTCAGGATGCCGGGGATGGAGCTGACCGTACGGGGC CGCAGTTGGGCCATCCATGACGGAATCCTGGATGAACCCTGGGATGAAATACGTATCTACAAAATGATCGGCGTTGATGC CGGGTTGAACACCTTCCCGGGCCGCCAGTCTGAGGAGCATCACTAA
Upstream 100 bases:
>100_bases ACCGCGGCCTGGCGCTGGATGCCCTGGAACGCAGCATCAACGTCATCAAGAAGCAGATCTTCCCGGTGATTATCGGTGGA GAACTGGCGGTACTGCTCTG
Downstream 100 bases:
>100_bases TGCAGAACTGCATTGCACCAACCCCGCTGGACGGGATCAGCTACTTTCAACCTCCTGTAGATTTCCACATCACCGGTCGT GATGGCCGGGTCAACATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MPKLPGNSPMLGRHGHALTSLAAINRLDTPEKEAIYAGLLPGRLLQLLQLDPGTLCTPAEERLVEIIAPDGLSFARIEVR ARPEDTDVVFFAELSDTQFHQMELAFCIICDPSAPRFAVDVNEAGAVNYFSSNGRNLPEELRAMQAGLFPHQTRRGLRMF GEFFALAERFTDRLGMEMIVAEPLSYDNAIRYERYGFDYLTGKRLMLEIDREFQPGGRLHRRLDGSSPFRMPGMELTVRG RSWAIHDGILDEPWDEIRIYKMIGVDAGLNTFPGRQSEEHH
Sequences:
>Translated_281_residues MPKLPGNSPMLGRHGHALTSLAAINRLDTPEKEAIYAGLLPGRLLQLLQLDPGTLCTPAEERLVEIIAPDGLSFARIEVR ARPEDTDVVFFAELSDTQFHQMELAFCIICDPSAPRFAVDVNEAGAVNYFSSNGRNLPEELRAMQAGLFPHQTRRGLRMF GEFFALAERFTDRLGMEMIVAEPLSYDNAIRYERYGFDYLTGKRLMLEIDREFQPGGRLHRRLDGSSPFRMPGMELTVRG RSWAIHDGILDEPWDEIRIYKMIGVDAGLNTFPGRQSEEHH >Mature_280_residues PKLPGNSPMLGRHGHALTSLAAINRLDTPEKEAIYAGLLPGRLLQLLQLDPGTLCTPAEERLVEIIAPDGLSFARIEVRA RPEDTDVVFFAELSDTQFHQMELAFCIICDPSAPRFAVDVNEAGAVNYFSSNGRNLPEELRAMQAGLFPHQTRRGLRMFG EFFALAERFTDRLGMEMIVAEPLSYDNAIRYERYGFDYLTGKRLMLEIDREFQPGGRLHRRLDGSSPFRMPGMELTVRGR SWAIHDGILDEPWDEIRIYKMIGVDAGLNTFPGRQSEEHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31777; Mature: 31646
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLPGNSPMLGRHGHALTSLAAINRLDTPEKEAIYAGLLPGRLLQLLQLDPGTLCTPAE CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHCCCCCCCCCHH ERLVEIIAPDGLSFARIEVRARPEDTDVVFFAELSDTQFHQMELAFCIICDPSAPRFAVD HHEEEEECCCCCEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEE VNEAGAVNYFSSNGRNLPEELRAMQAGLFPHQTRRGLRMFGEFFALAERFTDRLGMEMIV CCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE AEPLSYDNAIRYERYGFDYLTGKRLMLEIDREFQPGGRLHRRLDGSSPFRMPGMELTVRG ECCCCCCCCEEEECCCCCEECCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEECC RSWAIHDGILDEPWDEIRIYKMIGVDAGLNTFPGRQSEEHH CEEEEECCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure PKLPGNSPMLGRHGHALTSLAAINRLDTPEKEAIYAGLLPGRLLQLLQLDPGTLCTPAE CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHCCCCCCCCCHH ERLVEIIAPDGLSFARIEVRARPEDTDVVFFAELSDTQFHQMELAFCIICDPSAPRFAVD HHEEEEECCCCCEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEE VNEAGAVNYFSSNGRNLPEELRAMQAGLFPHQTRRGLRMFGEFFALAERFTDRLGMEMIV CCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE AEPLSYDNAIRYERYGFDYLTGKRLMLEIDREFQPGGRLHRRLDGSSPFRMPGMELTVRG ECCCCCCCCEEEECCCCCEECCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEECC RSWAIHDGILDEPWDEIRIYKMIGVDAGLNTFPGRQSEEHH CEEEEECCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA