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The map label for this gene is ybjT [H]

Identifier: 189423558

GI number: 189423558

Start: 463024

End: 463941

Strand: Reverse

Name: ybjT [H]

Synonym: Glov_0487

Alternate gene names: 189423558

Gene position: 463941-463024 (Counterclockwise)

Preceding gene: 189423572

Following gene: 189423557

Centisome position: 11.84

GC content: 58.39

Gene sequence:

>918_bases
ATGATCAGACAGGAACAGACCACCATACTGGTTACCGGCGCAAACGGCTTTATCGGCAGGCGTCTGGTGAAAGAGCTGTT
GCAGCGGGGCTACCGGGTACGCTGCATGGTACGCCGACCTTCAGATCTGCCTGCTGAGGTTGAACAGATCCAGGCTGATC
TGCTGCAACCTGACAGCCTGCCTGCTGCCCTGAACGGGATAGATACGGTCTACTACCTGGTGCATTCAATGGGACAGAGC
AAAGGTGATTTTGCTGAGCAGGACCGTCTGGCAGCCCGTAACTTTGTTGCCAGCGCAGATCTGGCCGGCGTCAAACGGGT
CATCTATCTGGGCGGGTTGGGCGAGACCGGCGACAACCTTTCCCACCACCTGGCCAGCCGTCTTGAGGTGGCCCATATCC
TGCAAACCGGCTGTTTCAGCACCACCTTCCTGCGGGCTGCCGTGATCATCGGATTTGGCGGTTCATCCTACGAGATGGTG
CACAGTCTGGTGAAACGGCTGCCGGTCATGATCACCCCCCGCTGGGTCAGCACCCGCAACCAGCCGATCGCCGTGGCTGA
TGTGATTGCCTATCTGGCCGGTTGTCTGGAAGAACCCAAAACCGCCGGCGGTACCTTTGATATCGGCGGTCCCGAGATCA
TGACCTACAAGGAGATGATGGAGCGGTTTGCGGTGCTGGAAGGCAAACGGCTCTGGATCATTCCGGTGCCGGTGTTGACG
CCAAAGCTCTCTTCCTACTGGGTGGGGTTGGTAACACCGGTCAAGCCGGCCATTGCCATTGCCCTGATTGAAGGACTGAA
GAATGAAGTAATCTGCCGGGACACCCGGATCCGGGAATTGCTGCCGATCCGGCTGACCCCCTACGACGACGCCATACGAA
CGGCCCTGGCCGAACAACATGCAGGAGGTTCTTTATGA

Upstream 100 bases:

>100_bases
ACAGGCGATCTGTAACGGAGCCTTGGCTGACATGGCAAACAGTGTGCCACACAAACTGTCCGCTTGCCAGCATCAGAATT
TGTGGCAGAATAGCGCTACC

Downstream 100 bases:

>100_bases
AAAAGATCGGAGTGATACTTTCAGGTTGCGGTTTCCGTGACGGCAGTGAGATCCATGAGGCGGTCTGTGCTCTTTTGGCC
ATTGACCAGGCCGGTGCCGA

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MIRQEQTTILVTGANGFIGRRLVKELLQRGYRVRCMVRRPSDLPAEVEQIQADLLQPDSLPAALNGIDTVYYLVHSMGQS
KGDFAEQDRLAARNFVASADLAGVKRVIYLGGLGETGDNLSHHLASRLEVAHILQTGCFSTTFLRAAVIIGFGGSSYEMV
HSLVKRLPVMITPRWVSTRNQPIAVADVIAYLAGCLEEPKTAGGTFDIGGPEIMTYKEMMERFAVLEGKRLWIIPVPVLT
PKLSSYWVGLVTPVKPAIAIALIEGLKNEVICRDTRIRELLPIRLTPYDDAIRTALAEQHAGGSL

Sequences:

>Translated_305_residues
MIRQEQTTILVTGANGFIGRRLVKELLQRGYRVRCMVRRPSDLPAEVEQIQADLLQPDSLPAALNGIDTVYYLVHSMGQS
KGDFAEQDRLAARNFVASADLAGVKRVIYLGGLGETGDNLSHHLASRLEVAHILQTGCFSTTFLRAAVIIGFGGSSYEMV
HSLVKRLPVMITPRWVSTRNQPIAVADVIAYLAGCLEEPKTAGGTFDIGGPEIMTYKEMMERFAVLEGKRLWIIPVPVLT
PKLSSYWVGLVTPVKPAIAIALIEGLKNEVICRDTRIRELLPIRLTPYDDAIRTALAEQHAGGSL
>Mature_305_residues
MIRQEQTTILVTGANGFIGRRLVKELLQRGYRVRCMVRRPSDLPAEVEQIQADLLQPDSLPAALNGIDTVYYLVHSMGQS
KGDFAEQDRLAARNFVASADLAGVKRVIYLGGLGETGDNLSHHLASRLEVAHILQTGCFSTTFLRAAVIIGFGGSSYEMV
HSLVKRLPVMITPRWVSTRNQPIAVADVIAYLAGCLEEPKTAGGTFDIGGPEIMTYKEMMERFAVLEGKRLWIIPVPVLT
PKLSSYWVGLVTPVKPAIAIALIEGLKNEVICRDTRIRELLPIRLTPYDDAIRTALAEQHAGGSL

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=295, Percent_Identity=40, Blast_Score=227, Evalue=9e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33492; Mature: 33492

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQEQTTILVTGANGFIGRRLVKELLQRGYRVRCMVRRPSDLPAEVEQIQADLLQPDSL
CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCC
PAALNGIDTVYYLVHSMGQSKGDFAEQDRLAARNFVASADLAGVKRVIYLGGLGETGDNL
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHH
SHHLASRLEVAHILQTGCFSTTFLRAAVIIGFGGSSYEMVHSLVKRLPVMITPRWVSTRN
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCCEEECCHHHCCCC
QPIAVADVIAYLAGCLEEPKTAGGTFDIGGPEIMTYKEMMERFAVLEGKRLWIIPVPVLT
CCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCC
PKLSSYWVGLVTPVKPAIAIALIEGLKNEVICRDTRIRELLPIRLTPYDDAIRTALAEQH
CCHHHHEEEECCCHHHHHHHHHHHHHCCCEEECCHHHHHHCCEEECCCHHHHHHHHHHHC
AGGSL
CCCCC
>Mature Secondary Structure
MIRQEQTTILVTGANGFIGRRLVKELLQRGYRVRCMVRRPSDLPAEVEQIQADLLQPDSL
CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCC
PAALNGIDTVYYLVHSMGQSKGDFAEQDRLAARNFVASADLAGVKRVIYLGGLGETGDNL
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHH
SHHLASRLEVAHILQTGCFSTTFLRAAVIIGFGGSSYEMVHSLVKRLPVMITPRWVSTRN
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCCEEECCHHHCCCC
QPIAVADVIAYLAGCLEEPKTAGGTFDIGGPEIMTYKEMMERFAVLEGKRLWIIPVPVLT
CCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCC
PKLSSYWVGLVTPVKPAIAIALIEGLKNEVICRDTRIRELLPIRLTPYDDAIRTALAEQH
CCHHHHEEEECCCHHHHHHHHHHHHHCCCEEECCHHHHHHCCEEECCCHHHHHHHHHHHC
AGGSL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]