| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423541
Identifier: 189423541
GI number: 189423541
Start: 443445
End: 445931
Strand: Reverse
Name: 189423541
Synonym: Glov_0470
Alternate gene names: NA
Gene position: 445931-443445 (Counterclockwise)
Preceding gene: 189423542
Following gene: 189423540
Centisome position: 11.38
GC content: 57.58
Gene sequence:
>2487_bases ATGCCTCTGGATCTGTTGAGTGTCGAAAAACCGGCCCGTTACATGGGCGGTGAAATGGGATCGGTCGTAAAACCGACCGC TGATCTACGCATCGCCCTGGCCTTTCCTGATCTGTATGAAGTCGGCATGAGCCATCTCGGGCTTCGCATTCTCTATCAGA TCCTGAACAATCAGGATGGCATCGCCGCTGAGCGCGTCTACACCCCCTGGCCTGATATGGCTGCTCAGATGGCAGCAGAG CAGGCTCCCCTCACTACCCTTGAAACAGCCACACCTCTCGCAGAAACTGATATTATCGGCTTCACACTCCAGTACGAGCT TTCCTGCACCAATATCCTGACCATGTTACGCCAGGCCGCCATCCCGGTGCGGGCTGAAGATCGCGCACAAGGCTGGCCGC TCATTATCGGTGGGGGGCCCGGCGCCTACAATCCCGAGCCGCTGGCCCCGTTCTTTGATGCTTTTTTATTGGGCGATGGT GAAGAAGCGGTGATTGAGATTGCACAGCATGTACGGGACTGGAAGGAGGCGGGCAGCAGTAACAAACAGGAACTGCTTGA GCAACTGGCCACCATCCCTGGCGTCTATGTACCTTCATTTTTCAACGTTGTGTACCATGACGACGGCCGGGTTGCCGCGG TACAGCCGCTCAAGCCGGGCTACACAACCGTACGCAGACGCTTTCTGCCTGATATTGAAGCAGCTGACTTTCCGGACAGC CCGATCATCCCGTTCCTGAAGACCATTCACGACCGGGTTGCAATTGAGGTTGCACGCGGCTGCACACGCGGCTGCCGTTT CTGTCAGGCCGGCTACATCTACCGACCGCTGCGCGAACGTTCACCGCAACGGATCAACGAGCTGATTGAGACCTCGCTAA AAAATACCGGCTACGAAGAGATCTCGTTACTGTCACTCTCCACCGGCGATTACAGCTGCATTGCACCGCTACTGCAGGAG TTGATGGCCCGCCATGCCCAGGGCCGGGTTGCCGTTTCACTCCCCTCACTACGGGTAGGCACCCTGACTCCGGAGCTGAT CGACGAAATTCGCAAGGTACGCAAAACCGGCTTTACCCTGGCTCCTGAGGCCGGCAGCGAAAGGATGCGCCGGGTCATCA ACAAGGGGATCTCGGAACAGGATCTGCTGGATGGCGCCTATAACATCTTTGCTGCCGGCTGGCGGCTGATCAAGCTGTAC TTCATGATGGGTCTTCCCACTGAAACCCGGGACGATCTACAGGCGATCCCCGAACTTGCCCGCCAGGTCAAGAATCAGGC ACGCCGCTCCGGCGGACAGGGTGAAGTCAACGTGGCGGTCAGTACCTTTGTACCCAAACCCCACACCCCTTTCCAGTGGC AGCGCCAGCTCTCCCTTGAAGAAACCCGTGATCGCCAGCGTTTTCTGAAAGACGAGATGCGGCGGCGCAAACTGAACTTC AAGTATCAGGACGCAGAGCTGTCCTTTATGGAAGGGGTACTTGCACGGGGAGATCGCCGCCTGGCCGACGTACTCGAACG CGTAGTCGAACTGGGAGCCTGTTTTGACGGCTGGAACGAACATTTTTCACTGCAGCGCTGGCTGCAGGCCTTCAGCGAAT GCGACATCGACCCGAACTGGTATCTGCGGGAACGGGACCAGAATGAACTGCTTCCCTGGGACCACCTGGATGCCGGTATT GACAAGGCCTTTCTACTGAAAGAACTCAACCGGGCCCATGGCGAGGCAGCAACCCCGGACTGCCGTTTTGGCGCCTGCTC CAACTGCGGGGTCTGTGATTTTAAAACCGTGGCCAACCGTGTTGTACAGCCCCCCACCTTCGGTGCAGCCAGGGAGCTGC CTGCAGCGCCTGGCGAAATCACGCAGCGACGCCTGAGGATGCGTTTCTCTAAGACCGGCCGGATCCGCTACCTGAGTCAC CTTGAACTGATCAACCTTTTTACCCGTGCCGTACAGCGGGCCGGTGTACCGATCCTCTACAGCCAGGGCTTCCACCCGCA CCCGCGCTTTTCCTTTGCCACTGCTACGTCGGTCGGCGTTGAATCGCAGGCCGAATACCTGGATCTGTTTGTTGGCGACA TAGGGGCCGATGAGGCGCTTCAGCGCCTTAACCAGGTGCTGCCTGCAGGCATGTCCATACTGGAAGCAACCGAGGTTGAC CTGAAGGCCCCCTCGCTTTCTCCCTTGATTGAGGCCACCCGCTACCGGGTCACCCTGCCAGACTGTGACCCGGAAACGCT CCGGAACCAGTGTGTGCAATTTATGGCACAAAGTTCCTGGGTGCTGGTCCGCGCAAAAAAAGGACAGCAACAGACCATCG ATCTTCGCAAGGAAACCCGAGAGCTGAGCGCGAACGGACATAGCCTTGAGTTCACCATTGGTCGAGGCAAGGCGAGCGAA CTGACTGCCGCAATCACCGGCCTGACACCTGATGCCTTAAAAACTGTGCATATTGAAAAGACATCAGTTGTTTTTGTGGC ATACTAA
Upstream 100 bases:
>100_bases CAAGGGTGTGCTAGTTCGAGTCTAGTCCTGGGCACCATTCAAAGAAAATGCCTCCGAAGTGTAGACTTCGGAGGTTTTTC TTTTTCAGCAAGGAACCGCC
Downstream 100 bases:
>100_bases GTCAAAATCAAACCAACTTATTATAGAGGTATCACCATGGCATCAGAACTGGTTATCAATGTCACCGCCCATGAAACGCG CATCTCCCTGATTGAAAAGG
Product: radical SAM protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 828; Mature: 827
Protein sequence:
>828_residues MPLDLLSVEKPARYMGGEMGSVVKPTADLRIALAFPDLYEVGMSHLGLRILYQILNNQDGIAAERVYTPWPDMAAQMAAE QAPLTTLETATPLAETDIIGFTLQYELSCTNILTMLRQAAIPVRAEDRAQGWPLIIGGGPGAYNPEPLAPFFDAFLLGDG EEAVIEIAQHVRDWKEAGSSNKQELLEQLATIPGVYVPSFFNVVYHDDGRVAAVQPLKPGYTTVRRRFLPDIEAADFPDS PIIPFLKTIHDRVAIEVARGCTRGCRFCQAGYIYRPLRERSPQRINELIETSLKNTGYEEISLLSLSTGDYSCIAPLLQE LMARHAQGRVAVSLPSLRVGTLTPELIDEIRKVRKTGFTLAPEAGSERMRRVINKGISEQDLLDGAYNIFAAGWRLIKLY FMMGLPTETRDDLQAIPELARQVKNQARRSGGQGEVNVAVSTFVPKPHTPFQWQRQLSLEETRDRQRFLKDEMRRRKLNF KYQDAELSFMEGVLARGDRRLADVLERVVELGACFDGWNEHFSLQRWLQAFSECDIDPNWYLRERDQNELLPWDHLDAGI DKAFLLKELNRAHGEAATPDCRFGACSNCGVCDFKTVANRVVQPPTFGAARELPAAPGEITQRRLRMRFSKTGRIRYLSH LELINLFTRAVQRAGVPILYSQGFHPHPRFSFATATSVGVESQAEYLDLFVGDIGADEALQRLNQVLPAGMSILEATEVD LKAPSLSPLIEATRYRVTLPDCDPETLRNQCVQFMAQSSWVLVRAKKGQQQTIDLRKETRELSANGHSLEFTIGRGKASE LTAAITGLTPDALKTVHIEKTSVVFVAY
Sequences:
>Translated_828_residues MPLDLLSVEKPARYMGGEMGSVVKPTADLRIALAFPDLYEVGMSHLGLRILYQILNNQDGIAAERVYTPWPDMAAQMAAE QAPLTTLETATPLAETDIIGFTLQYELSCTNILTMLRQAAIPVRAEDRAQGWPLIIGGGPGAYNPEPLAPFFDAFLLGDG EEAVIEIAQHVRDWKEAGSSNKQELLEQLATIPGVYVPSFFNVVYHDDGRVAAVQPLKPGYTTVRRRFLPDIEAADFPDS PIIPFLKTIHDRVAIEVARGCTRGCRFCQAGYIYRPLRERSPQRINELIETSLKNTGYEEISLLSLSTGDYSCIAPLLQE LMARHAQGRVAVSLPSLRVGTLTPELIDEIRKVRKTGFTLAPEAGSERMRRVINKGISEQDLLDGAYNIFAAGWRLIKLY FMMGLPTETRDDLQAIPELARQVKNQARRSGGQGEVNVAVSTFVPKPHTPFQWQRQLSLEETRDRQRFLKDEMRRRKLNF KYQDAELSFMEGVLARGDRRLADVLERVVELGACFDGWNEHFSLQRWLQAFSECDIDPNWYLRERDQNELLPWDHLDAGI DKAFLLKELNRAHGEAATPDCRFGACSNCGVCDFKTVANRVVQPPTFGAARELPAAPGEITQRRLRMRFSKTGRIRYLSH LELINLFTRAVQRAGVPILYSQGFHPHPRFSFATATSVGVESQAEYLDLFVGDIGADEALQRLNQVLPAGMSILEATEVD LKAPSLSPLIEATRYRVTLPDCDPETLRNQCVQFMAQSSWVLVRAKKGQQQTIDLRKETRELSANGHSLEFTIGRGKASE LTAAITGLTPDALKTVHIEKTSVVFVAY >Mature_827_residues PLDLLSVEKPARYMGGEMGSVVKPTADLRIALAFPDLYEVGMSHLGLRILYQILNNQDGIAAERVYTPWPDMAAQMAAEQ APLTTLETATPLAETDIIGFTLQYELSCTNILTMLRQAAIPVRAEDRAQGWPLIIGGGPGAYNPEPLAPFFDAFLLGDGE EAVIEIAQHVRDWKEAGSSNKQELLEQLATIPGVYVPSFFNVVYHDDGRVAAVQPLKPGYTTVRRRFLPDIEAADFPDSP IIPFLKTIHDRVAIEVARGCTRGCRFCQAGYIYRPLRERSPQRINELIETSLKNTGYEEISLLSLSTGDYSCIAPLLQEL MARHAQGRVAVSLPSLRVGTLTPELIDEIRKVRKTGFTLAPEAGSERMRRVINKGISEQDLLDGAYNIFAAGWRLIKLYF MMGLPTETRDDLQAIPELARQVKNQARRSGGQGEVNVAVSTFVPKPHTPFQWQRQLSLEETRDRQRFLKDEMRRRKLNFK YQDAELSFMEGVLARGDRRLADVLERVVELGACFDGWNEHFSLQRWLQAFSECDIDPNWYLRERDQNELLPWDHLDAGID KAFLLKELNRAHGEAATPDCRFGACSNCGVCDFKTVANRVVQPPTFGAARELPAAPGEITQRRLRMRFSKTGRIRYLSHL ELINLFTRAVQRAGVPILYSQGFHPHPRFSFATATSVGVESQAEYLDLFVGDIGADEALQRLNQVLPAGMSILEATEVDL KAPSLSPLIEATRYRVTLPDCDPETLRNQCVQFMAQSSWVLVRAKKGQQQTIDLRKETRELSANGHSLEFTIGRGKASEL TAAITGLTPDALKTVHIEKTSVVFVAY
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 92676; Mature: 92545
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00197 2FE2S_FER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDLLSVEKPARYMGGEMGSVVKPTADLRIALAFPDLYEVGMSHLGLRILYQILNNQDG CCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC IAAERVYTPWPDMAAQMAAEQAPLTTLETATPLAETDIIGFTLQYELSCTNILTMLRQAA CCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHC IPVRAEDRAQGWPLIIGGGPGAYNPEPLAPFFDAFLLGDGEEAVIEIAQHVRDWKEAGSS CCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC NKQELLEQLATIPGVYVPSFFNVVYHDDGRVAAVQPLKPGYTTVRRRFLPDIEAADFPDS CHHHHHHHHHHCCCCHHCHHEEEEEECCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCC PIIPFLKTIHDRVAIEVARGCTRGCRFCQAGYIYRPLRERSPQRINELIETSLKNTGYEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCC ISLLSLSTGDYSCIAPLLQELMARHAQGRVAVSLPSLRVGTLTPELIDEIRKVRKTGFTL EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCHHHHHHHHHHHHCCCEE APEAGSERMRRVINKGISEQDLLDGAYNIFAAGWRLIKLYFMMGLPTETRDDLQAIPELA CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RQVKNQARRSGGQGEVNVAVSTFVPKPHTPFQWQRQLSLEETRDRQRFLKDEMRRRKLNF HHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC KYQDAELSFMEGVLARGDRRLADVLERVVELGACFDGWNEHFSLQRWLQAFSECDIDPNW EECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC YLRERDQNELLPWDHLDAGIDKAFLLKELNRAHGEAATPDCRFGACSNCGVCDFKTVANR EECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH VVQPPTFGAARELPAAPGEITQRRLRMRFSKTGRIRYLSHLELINLFTRAVQRAGVPILY HCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE SQGFHPHPRFSFATATSVGVESQAEYLDLFVGDIGADEALQRLNQVLPAGMSILEATEVD CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC LKAPSLSPLIEATRYRVTLPDCDPETLRNQCVQFMAQSSWVLVRAKKGQQQTIDLRKETR CCCCCCHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH ELSANGHSLEFTIGRGKASELTAAITGLTPDALKTVHIEKTSVVFVAY HHCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHEEEEEEEEEEEEEEC >Mature Secondary Structure PLDLLSVEKPARYMGGEMGSVVKPTADLRIALAFPDLYEVGMSHLGLRILYQILNNQDG CCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC IAAERVYTPWPDMAAQMAAEQAPLTTLETATPLAETDIIGFTLQYELSCTNILTMLRQAA CCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHC IPVRAEDRAQGWPLIIGGGPGAYNPEPLAPFFDAFLLGDGEEAVIEIAQHVRDWKEAGSS CCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC NKQELLEQLATIPGVYVPSFFNVVYHDDGRVAAVQPLKPGYTTVRRRFLPDIEAADFPDS CHHHHHHHHHHCCCCHHCHHEEEEEECCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCC PIIPFLKTIHDRVAIEVARGCTRGCRFCQAGYIYRPLRERSPQRINELIETSLKNTGYEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCC ISLLSLSTGDYSCIAPLLQELMARHAQGRVAVSLPSLRVGTLTPELIDEIRKVRKTGFTL EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCHHHHHHHHHHHHCCCEE APEAGSERMRRVINKGISEQDLLDGAYNIFAAGWRLIKLYFMMGLPTETRDDLQAIPELA CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RQVKNQARRSGGQGEVNVAVSTFVPKPHTPFQWQRQLSLEETRDRQRFLKDEMRRRKLNF HHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC KYQDAELSFMEGVLARGDRRLADVLERVVELGACFDGWNEHFSLQRWLQAFSECDIDPNW EECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC YLRERDQNELLPWDHLDAGIDKAFLLKELNRAHGEAATPDCRFGACSNCGVCDFKTVANR EECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH VVQPPTFGAARELPAAPGEITQRRLRMRFSKTGRIRYLSHLELINLFTRAVQRAGVPILY HCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE SQGFHPHPRFSFATATSVGVESQAEYLDLFVGDIGADEALQRLNQVLPAGMSILEATEVD CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC LKAPSLSPLIEATRYRVTLPDCDPETLRNQCVQFMAQSSWVLVRAKKGQQQTIDLRKETR CCCCCCHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH ELSANGHSLEFTIGRGKASELTAAITGLTPDALKTVHIEKTSVVFVAY HHCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]