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The map label for this gene is rng [H]

Identifier: 189423540

GI number: 189423540

Start: 441897

End: 443408

Strand: Reverse

Name: rng [H]

Synonym: Glov_0469

Alternate gene names: 189423540

Gene position: 443408-441897 (Counterclockwise)

Preceding gene: 189423541

Following gene: 189423537

Centisome position: 11.32

GC content: 54.17

Gene sequence:

>1512_bases
ATGGCATCAGAACTGGTTATCAATGTCACCGCCCATGAAACGCGCATCTCCCTGATTGAAAAGGGGACCATTGCAGAACT
GTACATTGAGCGCACGCGGGAAAAAGGGATCGTCGGCAACATCTACAAAGGCCGGGTCGTCCGGGTACTGCCGGGCATGC
AGGCAGCCTTTGTCGACATCGGCCTTGAAAAGGCGGCCTTTCTGTATGTGGCCGATGTCTTTGACGCCATTGAAGAGTAT
GAAAACCTGATGGATGGCGGCAAGAAGGAAGACCATCACGATGACAGCAGCGACCAGGAATTCAAGGTGCTGCACCCGAT
CGAAGACCTGCTGCAGGAGGGCCAGGAACTGCTGGTGCAGGTTTCAAAGGAACCGATCGGCACCAAAGGAGCCCGCATTA
CCTCGCACATCTCGCTGCCGGGCCGTCATGTCGTCTACATGCCCACCGTTGATCATGTCGGCATCTCCCGCAGGATTGAA
GAGGAAGAGGAGCGGGAACGGCTGCGCGAAATTGTTGACCGCCTGCGCCAACCGGGCTGCGGCTTCATTGTTCGCACCGC
ATCAGAAGGAAAGACCGAAGAAGACCTGCGGGCCGACATGGAATATCTGGCCAAAATCTGGGCCGAGATCGTTAACAAGA
AAGAGAAGGCAACTGCCCCCTGCCTGATCCACGCCGACCTTGATGTGGTGCAGAAGGTGGTCCGGGATATTGTGACCGAT
GATGTCAATCGCATTGTGATCGACTCCAAGGCCGACCATGACCGGATTGTGCAGTTTATCTCCACTTTTATGCCCAAGAT
GAAATCCTCCATCGAGCTGTATGACGAAGAGGAACCGATTTTTGATCAGTACGGCCTTGAGGTTGAAATTAGCCGCGCCC
TTGGGCGCAAGGTCTGGCTGAAGTCAGGCGGCTATATCATTATCGAGCAGACTGAAGCATTGACCGCCATTGACGTCAAT
ACCGGCCGCTTTGTCGGCAAACACAATCTGGAAGACACCATCCTCAAGACCAACCTTGAAGCGGTCAAGGAGATCGCCTA
CCAGCTGCGCCTGCGTAATATTGGCGGCATTATCATCATTGACTTTATCGACATGGAGAAAGAGGTCAACCGCGAGAAGG
TCTATGCCGCCCTTGAGGATGCCCTCAAGAGCGATAAATCCAAGACCAATATCCTGAAGATATCCGAGCTGGGACTGGTG
GAGATGACCCGCAAACGGGTGCGGGAGAGTATCGGCAGAATGATGTGTGAACCCTGCCCTTACTGCGAGGGTCGCGGCTA
CGTCAAGTCAAAGACAACGATCTGCCATGAGATTTTCAGGGAGTTGCGGCGCGAAATGCTTGATATCCGCGGCACAAAGG
TCTTGCTCAGCGTTCACCCTCAGGTGGCAGACCTGCTCTATGATGAAGAACGGCGCGGACTTGAGGAACTTGAAAAGAAG
TTTAAGAAGCGGGTCACGGTCAGGGCCAAGCCCGGCTTCCATCAAGAACAGTTCGAGGTGGTCATCAGCTAG

Upstream 100 bases:

>100_bases
GACACCTGATGCCTTAAAAACTGTGCATATTGAAAAGACATCAGTTGTTTTTGTGGCATACTAAGTCAAAATCAAACCAA
CTTATTATAGAGGTATCACC

Downstream 100 bases:

>100_bases
CCCCCGGTTACCGATACCACCCGATCACACAACGTAAAAGCGGCACAGGATATTTCCTGCGCCGCTTTTGCTTCACTCAG
CGTACACTAATAAGCTTAGG

Product: Rne/Rng family ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MASELVINVTAHETRISLIEKGTIAELYIERTREKGIVGNIYKGRVVRVLPGMQAAFVDIGLEKAAFLYVADVFDAIEEY
ENLMDGGKKEDHHDDSSDQEFKVLHPIEDLLQEGQELLVQVSKEPIGTKGARITSHISLPGRHVVYMPTVDHVGISRRIE
EEEERERLREIVDRLRQPGCGFIVRTASEGKTEEDLRADMEYLAKIWAEIVNKKEKATAPCLIHADLDVVQKVVRDIVTD
DVNRIVIDSKADHDRIVQFISTFMPKMKSSIELYDEEEPIFDQYGLEVEISRALGRKVWLKSGGYIIIEQTEALTAIDVN
TGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFIDMEKEVNREKVYAALEDALKSDKSKTNILKISELGLV
EMTRKRVRESIGRMMCEPCPYCEGRGYVKSKTTICHEIFRELRREMLDIRGTKVLLSVHPQVADLLYDEERRGLEELEKK
FKKRVTVRAKPGFHQEQFEVVIS

Sequences:

>Translated_503_residues
MASELVINVTAHETRISLIEKGTIAELYIERTREKGIVGNIYKGRVVRVLPGMQAAFVDIGLEKAAFLYVADVFDAIEEY
ENLMDGGKKEDHHDDSSDQEFKVLHPIEDLLQEGQELLVQVSKEPIGTKGARITSHISLPGRHVVYMPTVDHVGISRRIE
EEEERERLREIVDRLRQPGCGFIVRTASEGKTEEDLRADMEYLAKIWAEIVNKKEKATAPCLIHADLDVVQKVVRDIVTD
DVNRIVIDSKADHDRIVQFISTFMPKMKSSIELYDEEEPIFDQYGLEVEISRALGRKVWLKSGGYIIIEQTEALTAIDVN
TGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFIDMEKEVNREKVYAALEDALKSDKSKTNILKISELGLV
EMTRKRVRESIGRMMCEPCPYCEGRGYVKSKTTICHEIFRELRREMLDIRGTKVLLSVHPQVADLLYDEERRGLEELEKK
FKKRVTVRAKPGFHQEQFEVVIS
>Mature_502_residues
ASELVINVTAHETRISLIEKGTIAELYIERTREKGIVGNIYKGRVVRVLPGMQAAFVDIGLEKAAFLYVADVFDAIEEYE
NLMDGGKKEDHHDDSSDQEFKVLHPIEDLLQEGQELLVQVSKEPIGTKGARITSHISLPGRHVVYMPTVDHVGISRRIEE
EEERERLREIVDRLRQPGCGFIVRTASEGKTEEDLRADMEYLAKIWAEIVNKKEKATAPCLIHADLDVVQKVVRDIVTDD
VNRIVIDSKADHDRIVQFISTFMPKMKSSIELYDEEEPIFDQYGLEVEISRALGRKVWLKSGGYIIIEQTEALTAIDVNT
GRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIIIDFIDMEKEVNREKVYAALEDALKSDKSKTNILKISELGLVE
MTRKRVRESIGRMMCEPCPYCEGRGYVKSKTTICHEIFRELRREMLDIRGTKVLLSVHPQVADLLYDEERRGLEELEKKF
KKRVTVRAKPGFHQEQFEVVIS

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=502, Percent_Identity=48.207171314741, Blast_Score=453, Evalue=1e-128,
Organism=Escherichia coli, GI1787325, Length=482, Percent_Identity=37.344398340249, Blast_Score=291, Evalue=7e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 57563; Mature: 57432

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASELVINVTAHETRISLIEKGTIAELYIERTREKGIVGNIYKGRVVRVLPGMQAAFVDI
CCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHH
GLEKAAFLYVADVFDAIEEYENLMDGGKKEDHHDDSSDQEFKVLHPIEDLLQEGQELLVQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
VSKEPIGTKGARITSHISLPGRHVVYMPTVDHVGISRRIEEEEERERLREIVDRLRQPGC
HHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCC
GFIVRTASEGKTEEDLRADMEYLAKIWAEIVNKKEKATAPCLIHADLDVVQKVVRDIVTD
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHC
DVNRIVIDSKADHDRIVQFISTFMPKMKSSIELYDEEEPIFDQYGLEVEISRALGRKVWL
CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHCCCEEEEHHHHCCEEEE
KSGGYIIIEQTEALTAIDVNTGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIII
ECCCEEEEEECCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
DFIDMEKEVNREKVYAALEDALKSDKSKTNILKISELGLVEMTRKRVRESIGRMMCEPCP
EEECCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHCCCCC
YCEGRGYVKSKTTICHEIFRELRREMLDIRGTKVLLSVHPQVADLLYDEERRGLEELEKK
CCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCHHHHHHH
FKKRVTVRAKPGFHQEQFEVVIS
HHHCEEEEECCCCCCCHHHEECC
>Mature Secondary Structure 
ASELVINVTAHETRISLIEKGTIAELYIERTREKGIVGNIYKGRVVRVLPGMQAAFVDI
CCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHH
GLEKAAFLYVADVFDAIEEYENLMDGGKKEDHHDDSSDQEFKVLHPIEDLLQEGQELLVQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
VSKEPIGTKGARITSHISLPGRHVVYMPTVDHVGISRRIEEEEERERLREIVDRLRQPGC
HHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCC
GFIVRTASEGKTEEDLRADMEYLAKIWAEIVNKKEKATAPCLIHADLDVVQKVVRDIVTD
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHC
DVNRIVIDSKADHDRIVQFISTFMPKMKSSIELYDEEEPIFDQYGLEVEISRALGRKVWL
CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHCCCEEEEHHHHCCEEEE
KSGGYIIIEQTEALTAIDVNTGRFVGKHNLEDTILKTNLEAVKEIAYQLRLRNIGGIIII
ECCCEEEEEECCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
DFIDMEKEVNREKVYAALEDALKSDKSKTNILKISELGLVEMTRKRVRESIGRMMCEPCP
EEECCHHHCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHCCCCC
YCEGRGYVKSKTTICHEIFRELRREMLDIRGTKVLLSVHPQVADLLYDEERRGLEELEKK
CCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCHHHHHHH
FKKRVTVRAKPGFHQEQFEVVIS
HHHCEEEEECCCCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]