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The map label for this gene is kefA [C]

Identifier: 189423435

GI number: 189423435

Start: 336214

End: 337830

Strand: Reverse

Name: kefA [C]

Synonym: Glov_0364

Alternate gene names: 189423435

Gene position: 337830-336214 (Counterclockwise)

Preceding gene: 189423443

Following gene: 189423434

Centisome position: 8.62

GC content: 60.24

Gene sequence:

>1617_bases
ATGTTCCATCAGTTAATCCGTATCCTGCTGTGTATCTGCCTGTTCGTATCATCTCTGGTGGCGGCCCACGCAGCTCCACC
CGTCAGCCCAGCGACGACTCAGACCTCGGCCACGGTCACCGTCTTCAATCGCCCGGTGGTTGAATTCCGTGCTCCGTTGC
TGGGGGTTCCGGTTGGAGAGCGGGCGCAGCGGGCCAGTGAAGTGTTGCGGCGTATGCTGGCTACCAGCAGTAGCGGCAAG
GTCACCCTGCAGCCGATTCCTCAAGGGATTTCCATTATGCTGGACGGGGTACTGGCCTTTACCATGGTCCCTGAAGATGT
TGATCCGCTTAAACAGGAATCTCTGGAGCAGGCAGCCAAAAATGCCGCAACAGCGCTGGAACTGGTGGTTCGTGAAACCC
GCGAGGCCCGTGACCTGAAAGTCTTAATGCGTGCTGCAGGTTTTGTTCTAGCAGCGACCCTGGCGTTTCTGCTGTTGGTC
TGGCTGCTGCACCGGGCCAGAAAATGGCTGACCTTCCGTCTGGCCAGTCTTGCCCATACCCACGCAGAACGCCTCAGCGT
GGGGGGTGAATCCCTGATGAACCGGGAGCGTCTGCTGCAACTGGTTCGGCGGGCGGTCACGCTGGTGTACTGGGCGCTGG
CTCTGTTTCTGTTCTATGACTGGCTGGGCTTTACCCTGGGGCGTTTTCCCTATACCCGGCCCTGGGGGGAACGGTTGACC
CAGTATCTGCTTGATCTGATAGCCCGCTTTGGCGGGGCTATCGCCCGCACCATCCCGGATCTGCTGGTGGCAGTACTGAT
CTTCCTGATCGCCAAGTTTATGATCGATCTGCTGAAGACGGTCTTTGAGCGGGTTGAGCAGGGTAAACTGGAGATTGCCT
GGCTGGATCGGGACACGGTCAGCCCAACCCGCCGCCTGATCTCGGCCGGTATCTGGCTGTTTGCCCTGGTAATGGCCTAT
CCCTACCTGCCCGGCTCCGGCACAGAGGCGTTCAAGGGGCTTTCGGTACTGATCGGTCTGATGGTCTCGCTGGGGGCCTC
CAGCCTGGTGGGTCAGGCTGCCAGCGGCCTGATCCTGATGTACACCCGTACCATCCGGGCCGGTGAGTATGTCCAGATCT
CCGGTCATCAGGGGACGGTCATGGAGCTGGGGCTGTTCACCACCCGGATCCGCACCGGGCTGGGTGAAGAACTGACTCTG
CCCAATGCCTTGATCCTCGGCAATGTCTCCCGCAACTACTCCCGCACCGTGGGGGACGGCTTTATTCTGGAGACCGGCGT
AACCATCGGCTATGACACCCCCTGGCGTCAGGTCCATGCCATGCTGATCGAAGCAGCTGGGCGCACCCCCGGCGTGCAGA
GTGAACCGGCTCCCCGGGTCTTCCAGACCGCCCTGTCCGACTACTACCCCGAATACCGGCTGGCCTGTCAGGTACTGCGA
AGCGGCCCGACCCAGCGGGCCGAGGTGCTAAGTGCCCTGCATGGCAACATTCAGGATGTGTTTAACGAGTATGGCGTACA
GATCATGTCACCCCATTATCTGAGTGATCCCCCTGAAGCGAAGATCGTACCCAAAGAGCAGTGGTATCAGGCACCGGCCC
AGAGAGCGGAGAATTAG

Upstream 100 bases:

>100_bases
AAGCCGCCAATACCATGAAAATAGACCGGTTCACGCTTGCAGTGCCGCCCGCCTGTGCTAAACTTCTGCCAATTCTGCAT
CCATGGAGGCCCCTCCGCCC

Downstream 100 bases:

>100_bases
TGCAACCGCCATTTGAACCGCTTAGCAACGCCGATGTCATCAGCCGGGCACTGGAGCAGCTGACCGTAGCCAATGATGAT
CCGCTGCCGCTGCTGGTGCA

Product: mechanosensitive ion channel MscS

Products: NA

Alternate protein names: Mechanosensitive Ion Channel Family Protein; Mechanosensitive Ion Channel MscS; Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel Protein MscS; Transporter MscS Family; Mechano-Sensitive Channel; Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Family Protein MscS; Small-Conductance Mechanosensitive Channel MscS; Mechano-Sensitive Ion Channel; Mechanosensitive Ion Channel Protein; Integral Membrane Protein; Conserved Protein; Ion Mechanosensitive Channel; Transmembrane Protein; Mechanosensitive Channel Protein; Mscs Mechanosensitive Ion Channel; Small-Conductance Mechanosensitive Channel-Like; Mechanosensitive Ion Channel MscS Family; Ion Channel Protein; Small Conductance Mechanosensitive Ion Channel

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MFHQLIRILLCICLFVSSLVAAHAAPPVSPATTQTSATVTVFNRPVVEFRAPLLGVPVGERAQRASEVLRRMLATSSSGK
VTLQPIPQGISIMLDGVLAFTMVPEDVDPLKQESLEQAAKNAATALELVVRETREARDLKVLMRAAGFVLAATLAFLLLV
WLLHRARKWLTFRLASLAHTHAERLSVGGESLMNRERLLQLVRRAVTLVYWALALFLFYDWLGFTLGRFPYTRPWGERLT
QYLLDLIARFGGAIARTIPDLLVAVLIFLIAKFMIDLLKTVFERVEQGKLEIAWLDRDTVSPTRRLISAGIWLFALVMAY
PYLPGSGTEAFKGLSVLIGLMVSLGASSLVGQAASGLILMYTRTIRAGEYVQISGHQGTVMELGLFTTRIRTGLGEELTL
PNALILGNVSRNYSRTVGDGFILETGVTIGYDTPWRQVHAMLIEAAGRTPGVQSEPAPRVFQTALSDYYPEYRLACQVLR
SGPTQRAEVLSALHGNIQDVFNEYGVQIMSPHYLSDPPEAKIVPKEQWYQAPAQRAEN

Sequences:

>Translated_538_residues
MFHQLIRILLCICLFVSSLVAAHAAPPVSPATTQTSATVTVFNRPVVEFRAPLLGVPVGERAQRASEVLRRMLATSSSGK
VTLQPIPQGISIMLDGVLAFTMVPEDVDPLKQESLEQAAKNAATALELVVRETREARDLKVLMRAAGFVLAATLAFLLLV
WLLHRARKWLTFRLASLAHTHAERLSVGGESLMNRERLLQLVRRAVTLVYWALALFLFYDWLGFTLGRFPYTRPWGERLT
QYLLDLIARFGGAIARTIPDLLVAVLIFLIAKFMIDLLKTVFERVEQGKLEIAWLDRDTVSPTRRLISAGIWLFALVMAY
PYLPGSGTEAFKGLSVLIGLMVSLGASSLVGQAASGLILMYTRTIRAGEYVQISGHQGTVMELGLFTTRIRTGLGEELTL
PNALILGNVSRNYSRTVGDGFILETGVTIGYDTPWRQVHAMLIEAAGRTPGVQSEPAPRVFQTALSDYYPEYRLACQVLR
SGPTQRAEVLSALHGNIQDVFNEYGVQIMSPHYLSDPPEAKIVPKEQWYQAPAQRAEN
>Mature_538_residues
MFHQLIRILLCICLFVSSLVAAHAAPPVSPATTQTSATVTVFNRPVVEFRAPLLGVPVGERAQRASEVLRRMLATSSSGK
VTLQPIPQGISIMLDGVLAFTMVPEDVDPLKQESLEQAAKNAATALELVVRETREARDLKVLMRAAGFVLAATLAFLLLV
WLLHRARKWLTFRLASLAHTHAERLSVGGESLMNRERLLQLVRRAVTLVYWALALFLFYDWLGFTLGRFPYTRPWGERLT
QYLLDLIARFGGAIARTIPDLLVAVLIFLIAKFMIDLLKTVFERVEQGKLEIAWLDRDTVSPTRRLISAGIWLFALVMAY
PYLPGSGTEAFKGLSVLIGLMVSLGASSLVGQAASGLILMYTRTIRAGEYVQISGHQGTVMELGLFTTRIRTGLGEELTL
PNALILGNVSRNYSRTVGDGFILETGVTIGYDTPWRQVHAMLIEAAGRTPGVQSEPAPRVFQTALSDYYPEYRLACQVLR
SGPTQRAEVLSALHGNIQDVFNEYGVQIMSPHYLSDPPEAKIVPKEQWYQAPAQRAEN

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786670, Length=187, Percent_Identity=27.807486631016, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59529; Mature: 59529

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHQLIRILLCICLFVSSLVAAHAAPPVSPATTQTSATVTVFNRPVVEFRAPLLGVPVGE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHCCCHHCCCCCH
RAQRASEVLRRMLATSSSGKVTLQPIPQGISIMLDGVLAFTMVPEDVDPLKQESLEQAAK
HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NAATALELVVRETREARDLKVLMRAAGFVLAATLAFLLLVWLLHRARKWLTFRLASLAHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAERLSVGGESLMNRERLLQLVRRAVTLVYWALALFLFYDWLGFTLGRFPYTRPWGERLT
HHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QYLLDLIARFGGAIARTIPDLLVAVLIFLIAKFMIDLLKTVFERVEQGKLEIAWLDRDTV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
SPTRRLISAGIWLFALVMAYPYLPGSGTEAFKGLSVLIGLMVSLGASSLVGQAASGLILM
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEEE
YTRTIRAGEYVQISGHQGTVMELGLFTTRIRTGLGEELTLPNALILGNVSRNYSRTVGDG
EEHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHCCCC
FILETGVTIGYDTPWRQVHAMLIEAAGRTPGVQSEPAPRVFQTALSDYYPEYRLACQVLR
EEEECCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHH
SGPTQRAEVLSALHGNIQDVFNEYGVQIMSPHYLSDPPEAKIVPKEQWYQAPAQRAEN
CCCCHHHHHHHHHHCCHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MFHQLIRILLCICLFVSSLVAAHAAPPVSPATTQTSATVTVFNRPVVEFRAPLLGVPVGE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHCCCHHCCCCCH
RAQRASEVLRRMLATSSSGKVTLQPIPQGISIMLDGVLAFTMVPEDVDPLKQESLEQAAK
HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NAATALELVVRETREARDLKVLMRAAGFVLAATLAFLLLVWLLHRARKWLTFRLASLAHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HAERLSVGGESLMNRERLLQLVRRAVTLVYWALALFLFYDWLGFTLGRFPYTRPWGERLT
HHHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
QYLLDLIARFGGAIARTIPDLLVAVLIFLIAKFMIDLLKTVFERVEQGKLEIAWLDRDTV
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
SPTRRLISAGIWLFALVMAYPYLPGSGTEAFKGLSVLIGLMVSLGASSLVGQAASGLILM
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEEE
YTRTIRAGEYVQISGHQGTVMELGLFTTRIRTGLGEELTLPNALILGNVSRNYSRTVGDG
EEHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHCCCC
FILETGVTIGYDTPWRQVHAMLIEAAGRTPGVQSEPAPRVFQTALSDYYPEYRLACQVLR
EEEECCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHH
SGPTQRAEVLSALHGNIQDVFNEYGVQIMSPHYLSDPPEAKIVPKEQWYQAPAQRAEN
CCCCHHHHHHHHHHCCHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA