| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is phoP [H]
Identifier: 189423443
GI number: 189423443
Start: 348422
End: 349444
Strand: Reverse
Name: phoP [H]
Synonym: Glov_0372
Alternate gene names: 189423443
Gene position: 349444-348422 (Counterclockwise)
Preceding gene: 189423444
Following gene: 189423435
Centisome position: 8.92
GC content: 56.01
Gene sequence:
>1023_bases ATGACAAAACAGCTGGGCGACATACTGGTTGATACGGAGCTGATCAGCAGAAAGACGCTGGAACGGGCACTGGAACGCCA AAAGGCAACTGCCAAGCGCCTGGGGCAGGTTCTGGAGGAGATGGGGGTTATTACCGAGGCAGAGCTGATGGAGGCACTGG TCAGCCAGCACAGCCCCTTTGCCGACATCAACCAGAAAAAGCAGTTGGGCGACATCCTGGTGAGGGCCAAACTGATCAGC GAAAAGACCCTGGAACGGGCACTGGAGCGCCAGCACACTGAAGGGAAAAAGCTTGGTGAAGTGTTGGAGGAGATGGGGGT CATCACTGAACTTGAGCTGGTAGAGGCGCTGGGACGCCAGTTCGGCTTCAAGACCGTCACAGACTTCAGCAACCGTACCT ATCCGGCCGAGACAATCAACCTGCTACCCACTGAGTTTGTCATGAAACGGCTCGTGTTTCCGTTGAAGCACAAGGATATG ATGCTGGCAGTGGCCATAACCGATCCTTTTGACGGCGAGACCACCGACATGATTGCCCGCATCACCGGACTGCAGGTAGT GCCGGTAATTGCCACCCGTAAGGAAATACTGGAGGCGATCGCCCGCCATTATCTGAATGCACCGGTAAACCCGGATGCCG GCAACACGATTCTGGTGGTGGAGGATTCTCCCACGGTTGCCACCGTTGTGCAGGCAGCCCTGGTAAAAGAAGGGTACAAC GTCATTATCTGCAAAGACGGTATTGAGGCGCTCAAGACCACCCTGACCCATCGCCCTCAACTGGTGATTACCGATGCCCA GATGCCCAAACTGGATGGACATGGTCTGCTGCGGGCAATCAAGGCCAATCCGATTACCGCGGCGATTCCGGTGATCATGC TGACCGGCCGGGCCTCCACCGATGAAGAGCAGAAGGCGCTTGACGCCGGCTTCTTTGACTTCATCCCCAAACCGGTCCAG CCGCTACGGGTGGTGTCTCGGGTCAAGCGTGCCCTGGAGCTATCAAAGAAGATAAAAAATTAA
Upstream 100 bases:
>100_bases TGCAGCTGTCCAAGCATCCCCTGACTGATGCCGGTATCAAAAAATTCCTGGAAGACTGGGAAAAAGTGCCGAAGTAGTTT GTGCACTACGTGGAGGTCGT
Downstream 100 bases:
>100_bases CGCCGCCGCTTCTGGCCCCGCCTGAATTCCCAGGGAGGCTGAGGGTTCGTATCCCGCCAGAGTCCCCGGTGTTGGCGCCG AGCCTGTTCTTCCAAAGCGA
Product: response regulator receiver protein
Products: NADP; 2 glutathione [C]
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTKQLGDILVDTELISRKTLERALERQKATAKRLGQVLEEMGVITEAELMEALVSQHSPFADINQKKQLGDILVRAKLIS EKTLERALERQHTEGKKLGEVLEEMGVITELELVEALGRQFGFKTVTDFSNRTYPAETINLLPTEFVMKRLVFPLKHKDM MLAVAITDPFDGETTDMIARITGLQVVPVIATRKEILEAIARHYLNAPVNPDAGNTILVVEDSPTVATVVQAALVKEGYN VIICKDGIEALKTTLTHRPQLVITDAQMPKLDGHGLLRAIKANPITAAIPVIMLTGRASTDEEQKALDAGFFDFIPKPVQ PLRVVSRVKRALELSKKIKN
Sequences:
>Translated_340_residues MTKQLGDILVDTELISRKTLERALERQKATAKRLGQVLEEMGVITEAELMEALVSQHSPFADINQKKQLGDILVRAKLIS EKTLERALERQHTEGKKLGEVLEEMGVITELELVEALGRQFGFKTVTDFSNRTYPAETINLLPTEFVMKRLVFPLKHKDM MLAVAITDPFDGETTDMIARITGLQVVPVIATRKEILEAIARHYLNAPVNPDAGNTILVVEDSPTVATVVQAALVKEGYN VIICKDGIEALKTTLTHRPQLVITDAQMPKLDGHGLLRAIKANPITAAIPVIMLTGRASTDEEQKALDAGFFDFIPKPVQ PLRVVSRVKRALELSKKIKN >Mature_339_residues TKQLGDILVDTELISRKTLERALERQKATAKRLGQVLEEMGVITEAELMEALVSQHSPFADINQKKQLGDILVRAKLISE KTLERALERQHTEGKKLGEVLEEMGVITELELVEALGRQFGFKTVTDFSNRTYPAETINLLPTEFVMKRLVFPLKHKDMM LAVAITDPFDGETTDMIARITGLQVVPVIATRKEILEAIARHYLNAPVNPDAGNTILVVEDSPTVATVVQAALVKEGYNV IICKDGIEALKTTLTHRPQLVITDAQMPKLDGHGLLRAIKANPITAAIPVIMLTGRASTDEEQKALDAGFFDFIPKPVQP LRVVSRVKRALELSKKIKN
Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]
COG id: COG3437
COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790299, Length=117, Percent_Identity=31.6239316239316, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1790437, Length=123, Percent_Identity=34.9593495934959, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1786599, Length=113, Percent_Identity=30.9734513274336, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788905, Length=119, Percent_Identity=31.9327731092437, Blast_Score=62, Evalue=7e-11, Organism=Escherichia coli, GI145693157, Length=103, Percent_Identity=33.0097087378641, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 37669; Mature: 37537
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQLGDILVDTELISRKTLERALERQKATAKRLGQVLEEMGVITEAELMEALVSQHSPF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC ADINQKKQLGDILVRAKLISEKTLERALERQHTEGKKLGEVLEEMGVITELELVEALGRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH FGFKTVTDFSNRTYPAETINLLPTEFVMKRLVFPLKHKDMMLAVAITDPFDGETTDMIAR CCCCHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHH ITGLQVVPVIATRKEILEAIARHYLNAPVNPDAGNTILVVEDSPTVATVVQAALVKEGYN HHCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCE VIICKDGIEALKTTLTHRPQLVITDAQMPKLDGHGLLRAIKANPITAAIPVIMLTGRAST EEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHEEECCCCC DEEQKALDAGFFDFIPKPVQPLRVVSRVKRALELSKKIKN CHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKQLGDILVDTELISRKTLERALERQKATAKRLGQVLEEMGVITEAELMEALVSQHSPF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC ADINQKKQLGDILVRAKLISEKTLERALERQHTEGKKLGEVLEEMGVITELELVEALGRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH FGFKTVTDFSNRTYPAETINLLPTEFVMKRLVFPLKHKDMMLAVAITDPFDGETTDMIAR CCCCHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHH ITGLQVVPVIATRKEILEAIARHYLNAPVNPDAGNTILVVEDSPTVATVVQAALVKEGYN HHCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCE VIICKDGIEALKTTLTHRPQLVITDAQMPKLDGHGLLRAIKANPITAAIPVIMLTGRAST EEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHEEECCCCC DEEQKALDAGFFDFIPKPVQPLRVVSRVKRALELSKKIKN CHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH2; oxidized glutathione [C]
Specific reaction: NADPH2 + oxidized glutathione = NADP + 2 glutathione [C]
General reaction: Oxidoreductases; Acting on NADH or NADPH; With a disulfide as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]