| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423414
Identifier: 189423414
GI number: 189423414
Start: 313526
End: 314266
Strand: Reverse
Name: 189423414
Synonym: Glov_0343
Alternate gene names: NA
Gene position: 314266-313526 (Counterclockwise)
Preceding gene: 189423416
Following gene: 189423413
Centisome position: 8.02
GC content: 56.68
Gene sequence:
>741_bases ATGGCAGAAGCAGTCAGCGGCTTCCAGGGTGAGATTGCCGGTCTTTCGCTCGCCGACGTCATCCAGATCAAGGGACACAA CAGGTATTCAGGCTGCATCACCGTAGAACACCTGGATCATCGCGGTGCAATCTATTTTGTAGACGGTGAGATCATCCATG CCGAGCAGGCCTCATTCAGCGGTGAGGATGCGATCTACGAAATCCTCAAGTGGCCCGGCGGCAACTTCAGCCTCGCTCCT GAAATGACCACCAACGTCTGCACCATCCACTGCAGCCTTAACTTCCTGCTGCTGGAAGCACACCGCAGAATGGATGAAGA GAACAACATGCCAGAGGAATCGTTCGCCGATGTGATCGAGACCAGCGAACGCCGCAAAGAGCCAAGGCCGGTTGATCCGG CAAGCCCCCAGCGCACCATGAGTGCTGCAGCAGCCAGGGTTATGCAGATCGACGCGGTGACCTATGCCGTGCTGCTAGAC AAGCAGGGACACCCGGTGCAGGACGACAGCATGGAGGCCGAGGCCCTGGCAGCAAAGGCACTGTTTCTGGCGCAATCCGG CAACAAGCTGGGTGATTTCCTCGGGCTGGGAGAGCTAAAATCCGCTGCTGTTCAGACCCAGCACTTTGACCTGTTGATGT ATGATTCAAAGCAGCACTATCTGGGTATCGCCGTTGCAACCGGCAACAAACTGGATGCTGTGGAAGCAGAAATCAGAGCC GCATTGGTGCCGGGGAGGTAA
Upstream 100 bases:
>100_bases TCATCCGGGACCTGACACTTAGGCAATAAAGTGCGTAAGATCCCTTTTTCGAGATATCCGCTCTTCTATCCAGGGCATCA TTCCACGCGGGAGTTCATTC
Downstream 100 bases:
>100_bases GGATTCATGCAGACTATCCTGCAACAGATAACCGCTATTGACGGCGTGATCGGCACTTCACTGTACAATGAGCAGGGAAA AATCCTTGCGGCAGCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MAEAVSGFQGEIAGLSLADVIQIKGHNRYSGCITVEHLDHRGAIYFVDGEIIHAEQASFSGEDAIYEILKWPGGNFSLAP EMTTNVCTIHCSLNFLLLEAHRRMDEENNMPEESFADVIETSERRKEPRPVDPASPQRTMSAAAARVMQIDAVTYAVLLD KQGHPVQDDSMEAEALAAKALFLAQSGNKLGDFLGLGELKSAAVQTQHFDLLMYDSKQHYLGIAVATGNKLDAVEAEIRA ALVPGR
Sequences:
>Translated_246_residues MAEAVSGFQGEIAGLSLADVIQIKGHNRYSGCITVEHLDHRGAIYFVDGEIIHAEQASFSGEDAIYEILKWPGGNFSLAP EMTTNVCTIHCSLNFLLLEAHRRMDEENNMPEESFADVIETSERRKEPRPVDPASPQRTMSAAAARVMQIDAVTYAVLLD KQGHPVQDDSMEAEALAAKALFLAQSGNKLGDFLGLGELKSAAVQTQHFDLLMYDSKQHYLGIAVATGNKLDAVEAEIRA ALVPGR >Mature_245_residues AEAVSGFQGEIAGLSLADVIQIKGHNRYSGCITVEHLDHRGAIYFVDGEIIHAEQASFSGEDAIYEILKWPGGNFSLAPE MTTNVCTIHCSLNFLLLEAHRRMDEENNMPEESFADVIETSERRKEPRPVDPASPQRTMSAAAARVMQIDAVTYAVLLDK QGHPVQDDSMEAEALAAKALFLAQSGNKLGDFLGLGELKSAAVQTQHFDLLMYDSKQHYLGIAVATGNKLDAVEAEIRAA LVPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26799; Mature: 26667
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAVSGFQGEIAGLSLADVIQIKGHNRYSGCITVEHLDHRGAIYFVDGEIIHAEQASFS CCCCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEEEECCCCEEEEECCEEEEECCCCCC GEDAIYEILKWPGGNFSLAPEMTTNVCTIHCSLNFLLLEAHRRMDEENNMPEESFADVIE CHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECEEEEEEHHHHCCCCCCCCHHHHHHHHH TSERRKEPRPVDPASPQRTMSAAAARVMQIDAVTYAVLLDKQGHPVQDDSMEAEALAAKA HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHH LFLAQSGNKLGDFLGLGELKSAAVQTQHFDLLMYDSKQHYLGIAVATGNKLDAVEAEIRA HEEECCCCHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHE ALVPGR EECCCC >Mature Secondary Structure AEAVSGFQGEIAGLSLADVIQIKGHNRYSGCITVEHLDHRGAIYFVDGEIIHAEQASFS CCCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEEEECCCCEEEEECCEEEEECCCCCC GEDAIYEILKWPGGNFSLAPEMTTNVCTIHCSLNFLLLEAHRRMDEENNMPEESFADVIE CHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECEEEEEEHHHHCCCCCCCCHHHHHHHHH TSERRKEPRPVDPASPQRTMSAAAARVMQIDAVTYAVLLDKQGHPVQDDSMEAEALAAKA HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHH LFLAQSGNKLGDFLGLGELKSAAVQTQHFDLLMYDSKQHYLGIAVATGNKLDAVEAEIRA HEEECCCCHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHE ALVPGR EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA