Click here to switch to the map view.

The map label for this gene is yceH [C]

Identifier: 189354040

GI number: 189354040

Start: 2368534

End: 2369241

Strand: Reverse

Name: yceH [C]

Synonym: BMULJ_05293

Alternate gene names: 189354040

Gene position: 2369241-2368534 (Counterclockwise)

Preceding gene: 189354041

Following gene: 189354039

Centisome position: 95.8

GC content: 70.34

Gene sequence:

>708_bases
ATGAACACCACGCCGGACACGCCCACGCCACGCGCCCTTCGCGAACTCACGCCCCTCGAGGCCCGCATTCTCGGCGTGCT
CGTCGAGAAGCAACACACGGTGCCGGATACCTATCCGCTGTCGCTGAATGCGCTGACCGCGGGCTGCAACCAGAAGACCG
CGCGCGCGCCGGTGATGAACGTGACCGACGACGAAGTGACGACGGCGCTCGACGCGCTCAAGCATCTGAGCCTCGTGTTC
GAGGGCAGCAGCAGCCGCGTGCCGCGTTTCGAACACAACCTGAACCGCGTGCTCGGCATTCCGAGCCAGGCGATCGCGCT
GCTGACGGTGCTGATGCTGCGCGGCCCGCAGACGGCGGCCGAGCTGCGGCTGAACAGCGCGCGGCTGCACGGCTTCGCCG
ACATCTCGTCGGTCGAGGCGTTTCTCGACGAACTCGCGACGCGCGAGCCGCCGCTCGTCGTGCGGCTGCCGCGCGCGCCG
GGCGCCCGCGAGAACCGCTGGATGCATTTGCTGTGCGGCGACGTCAACGTCGGTGAATTCGCGGGCGCGGACGGCGGCGG
CGCGGAGGCCGTGGCGCCGTCCGAGTTCGAGGCGCTGAAGGCGGAGCAGAAGCGTCTCGCGGACGAAGTCGCGCGGCTGA
ACGCGCTGGTGCGCCGCATGGCGTCCGAACTCGGGATCGACGCCGACGCGCCGGGCGACGCGAACTGA

Upstream 100 bases:

>100_bases
CGGCGCGAGCGCGCTTCGCCGCGAGCTATCATATGCGTCACCCGTCCGCCTGCCGGACGCGCACCAACCGATTCCTTCTG
CTGCTGCCGCGACGCCACTC

Downstream 100 bases:

>100_bases
CGCCCGATGCGGGTGCCATAATCGAGCCTGCCGATCCATCCAGACGCCCGCGGAGAATTCCCATGCAGAAGCTCGACAAT
CCCACGCACGATCGCGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNTTPDTPTPRALRELTPLEARILGVLVEKQHTVPDTYPLSLNALTAGCNQKTARAPVMNVTDDEVTTALDALKHLSLVF
EGSSSRVPRFEHNLNRVLGIPSQAIALLTVLMLRGPQTAAELRLNSARLHGFADISSVEAFLDELATREPPLVVRLPRAP
GARENRWMHLLCGDVNVGEFAGADGGGAEAVAPSEFEALKAEQKRLADEVARLNALVRRMASELGIDADAPGDAN

Sequences:

>Translated_235_residues
MNTTPDTPTPRALRELTPLEARILGVLVEKQHTVPDTYPLSLNALTAGCNQKTARAPVMNVTDDEVTTALDALKHLSLVF
EGSSSRVPRFEHNLNRVLGIPSQAIALLTVLMLRGPQTAAELRLNSARLHGFADISSVEAFLDELATREPPLVVRLPRAP
GARENRWMHLLCGDVNVGEFAGADGGGAEAVAPSEFEALKAEQKRLADEVARLNALVRRMASELGIDADAPGDAN
>Mature_235_residues
MNTTPDTPTPRALRELTPLEARILGVLVEKQHTVPDTYPLSLNALTAGCNQKTARAPVMNVTDDEVTTALDALKHLSLVF
EGSSSRVPRFEHNLNRVLGIPSQAIALLTVLMLRGPQTAAELRLNSARLHGFADISSVEAFLDELATREPPLVVRLPRAP
GARENRWMHLLCGDVNVGEFAGADGGGAEAVAPSEFEALKAEQKRLADEVARLNALVRRMASELGIDADAPGDAN

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family

Homologues:

Organism=Escherichia coli, GI1787306, Length=168, Percent_Identity=47.6190476190476, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5293_BURM1 (A9AL79)

Other databases:

- EMBL:   CP000869
- EMBL:   AP009386
- RefSeq:   YP_001583207.1
- RefSeq:   YP_001949667.1
- ProteinModelPortal:   A9AL79
- SMR:   A9AL79
- GeneID:   5768200
- GeneID:   6361959
- GenomeReviews:   AP009386_GR
- GenomeReviews:   CP000869_GR
- KEGG:   bmj:BMULJ_05293
- KEGG:   bmu:Bmul_3231
- HOGENOM:   HBG298268
- OMA:   TTPDQYP
- ProtClustDB:   CLSK941528
- HAMAP:   MF_01584
- InterPro:   IPR007432
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04337 DUF480

EC number: NA

Molecular weight: Translated: 25253; Mature: 25253

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTPDTPTPRALRELTPLEARILGVLVEKQHTVPDTYPLSLNALTAGCNQKTARAPVMN
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCCCCCC
VTDDEVTTALDALKHLSLVFEGSSSRVPRFEHNLNRVLGIPSQAIALLTVLMLRGPQTAA
CCHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
ELRLNSARLHGFADISSVEAFLDELATREPPLVVRLPRAPGARENRWMHLLCGDVNVGEF
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCCHHH
AGADGGGAEAVAPSEFEALKAEQKRLADEVARLNALVRRMASELGIDADAPGDAN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNTTPDTPTPRALRELTPLEARILGVLVEKQHTVPDTYPLSLNALTAGCNQKTARAPVMN
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCCCCCC
VTDDEVTTALDALKHLSLVFEGSSSRVPRFEHNLNRVLGIPSQAIALLTVLMLRGPQTAA
CCHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
ELRLNSARLHGFADISSVEAFLDELATREPPLVVRLPRAPGARENRWMHLLCGDVNVGEF
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCCHHH
AGADGGGAEAVAPSEFEALKAEQKRLADEVARLNALVRRMASELGIDADAPGDAN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA