| Definition | Burkholderia multivorans ATCC 17616 chromosome 2, complete genome. |
|---|---|
| Accession | NC_010805 |
| Length | 2,473,162 |
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The map label for this gene is cstA [H]
Identifier: 189354027
GI number: 189354027
Start: 2354465
End: 2356543
Strand: Reverse
Name: cstA [H]
Synonym: BMULJ_05280
Alternate gene names: 189354027
Gene position: 2356543-2354465 (Counterclockwise)
Preceding gene: 189354029
Following gene: 189354026
Centisome position: 95.28
GC content: 66.23
Gene sequence:
>2079_bases ATGAATCGGGCATCCAGCACCCTGATCTGGATCGCGGTCGCGCTGCTAGGCGCGTTCGCGTTCGGAACGATCGCACTCGC ACACGGCGAGCGCGTCAGCGCGTTGTGGATCGTGATCGCCGCAGTCTGCGTGTATCTGATCGCATATCGCTTCTACAGCC GCTTCATCGCCAGCAAGGTCATGCAGCTCGACGGCCTGCGGATGACGCCGGCCGTCAAGTACAACGACGGCCTCGACTAC GTGCCGACCAACAAGTACGTGCTGTTCGGCCATCACTTCGCCGCGATCGCCGGCGCCGGGCCGCTCGTCGGGCCCGTGCT CGCCGCGCAGATGGGCTACACGCCCGGCATGCTGTGGATCCTGGCCGGCGTCGTGTTCGCCGGCGCGGTGCAGGACTTCA TCGTGCTGTTCATCTCGACGCGCCGCGACGGCCGCTCGCTCGGCGATCTCGTCAAGATGGAACTCGGCACGGTGCCCGGC GTGATCGCGCTGTTCGGCGCGTTCCTGATCATGGTGATCATCCTCGCCGTGCTCGCGCTGATCGTCGTGAAGGCGCTGAC CAATTCGCCGTGGGGCACGTTCACCGTCGCGGCGACGATTCCGATCGCGCTGTTCATGGGCGTCTATACGCGCTTCATCC GTCCGGGCCGCATCGGCGAAGTGTCGATCATCGGCTTCGTGCTGCTGATGGCGTCGATCGCGTACGGTCAGCACGTGCAC GATTCGCCGACGCTCGCCGCCTGGTTCACGTTCAGCGGCACGCAGCTCACCTGGATCCTGATCGGCTACGGCTTCGTCGC GTCGGTGCTGCCGGTGTGGCTGCTGCTCGCGCCGCGCGACTATCTGTCGACGTTCCTGAAGGTCGGCACGATCGTCGGTC TCGCGATCGGCATCCTGATCGTCGCGCCGGAACTGAAGATGCCGGCGCTGACGAAGTTCGTCGACGGCACGGGCCCGGTC TGGTCGGGCAACCTGTTCCCGTTCCTGTTCATCACGATCGCGTGCGGCGCGGTGTCGGGCTTCCACGCGCTGATCTCGTC GGGTACGACGCCGAAGCTGATCGACAACGAAACCAACGCGCGCTTCATCGGTTACGGCGCGATGCTGATGGAATCGTTCG TCGCGATCATGGCGCTCGTCGCCGCGTGCGTGATCGAGCCGGGCATCTACTTCGCGATGAACGCACCGGCCGCCGTGCTC GGCTCGACGCCGGAAGCCGTCGCGAACACCGTCACGCAGTGGGGCTTCGTGCTGACGCCCGACATGCTCACGCAGACGGC GAAGGCCGTCGGCGAAACGACGATCATCGCGCGTGCGGGCGGCGCGCCGACGCTGGCGGTCGGGATGGCGCACATCCTGC ACCAGGTGATCGGCGGCGAAGCGATGATGGCATTCTGGTATCACTTCGCGATCCTGTTCGAGGCGCTGTTCATCCTGACG GCGGTCGACGCCGGCACGCGTGCGGGCCGCTTCATGCTGCAGGATCTGCTCGGCACGTTCCATCCGGCGCTCAAGCGCAC CGAGTCGCTGCCCGCGAACCTGATCGCGACCGGCCTGTGCGTGGCGGCGTGGGGCTACTTCCTGTATCAGGGCGTGGTCG ATCCGCTTGGCGGCATCAACACGCTGTGGCCGCTGTTCGGCATCTCGAACCAGATGCTCGCCGCGATCGCGCTGGTGCTC GGCACCGTCGTGCTGTTCAAGATGAAGCGCGAGCGCTATGCGTGGGTCACGATCGTGCCGACGGCCTGGCTGCTGATCTG CACGCTGACGGCCGGCTGGCAGAAGATCTTCGACGCGAATCCGAAGGTCAGCTTCCTCGCGCACGCGGCGAAGCTGCAGG CCGCAGTCGACGAAGGCAAGGTGCTCGCGCCGGCGAAGTCGATCGCGCAGATGAAGCGGATCATCTTCAACGACTATGTC GATGCCGCGCTCGCGGGGCTGTTCATTCTCGTCGTCGTCAGCATCGCGGTGTACGGGCTGATTGCCGTGTTGCGCGCACG CCGCGAGGCGAAGCCGACCGTGCGCGAGACGCCGTACGAAGCGATGCCGGCCGCGCAGGCGCTCGGCAGCGGACGCTGA
Upstream 100 bases:
>100_bases GCCCCGGCCGCCCAGGACCGGGGCGCGACGCTTTGACGTCACGTGGGCGCGGTGTGCCGCCGCGCTCAATCGAGAACCAA ATAGGAGACTAGGAGACGCC
Downstream 100 bases:
>100_bases AGCGGAGGCCGCGATGTTCAGCGATCTCGGCAGCGACCTGCGCAGCGCCGGACGTTATCTCGGGCAGGCGCTGCGGCTGA TGGTCGGGTTGCCCGACTAC
Product: carbon starvation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 692; Mature: 692
Protein sequence:
>692_residues MNRASSTLIWIAVALLGAFAFGTIALAHGERVSALWIVIAAVCVYLIAYRFYSRFIASKVMQLDGLRMTPAVKYNDGLDY VPTNKYVLFGHHFAAIAGAGPLVGPVLAAQMGYTPGMLWILAGVVFAGAVQDFIVLFISTRRDGRSLGDLVKMELGTVPG VIALFGAFLIMVIILAVLALIVVKALTNSPWGTFTVAATIPIALFMGVYTRFIRPGRIGEVSIIGFVLLMASIAYGQHVH DSPTLAAWFTFSGTQLTWILIGYGFVASVLPVWLLLAPRDYLSTFLKVGTIVGLAIGILIVAPELKMPALTKFVDGTGPV WSGNLFPFLFITIACGAVSGFHALISSGTTPKLIDNETNARFIGYGAMLMESFVAIMALVAACVIEPGIYFAMNAPAAVL GSTPEAVANTVTQWGFVLTPDMLTQTAKAVGETTIIARAGGAPTLAVGMAHILHQVIGGEAMMAFWYHFAILFEALFILT AVDAGTRAGRFMLQDLLGTFHPALKRTESLPANLIATGLCVAAWGYFLYQGVVDPLGGINTLWPLFGISNQMLAAIALVL GTVVLFKMKRERYAWVTIVPTAWLLICTLTAGWQKIFDANPKVSFLAHAAKLQAAVDEGKVLAPAKSIAQMKRIIFNDYV DAALAGLFILVVVSIAVYGLIAVLRARREAKPTVRETPYEAMPAAQALGSGR
Sequences:
>Translated_692_residues MNRASSTLIWIAVALLGAFAFGTIALAHGERVSALWIVIAAVCVYLIAYRFYSRFIASKVMQLDGLRMTPAVKYNDGLDY VPTNKYVLFGHHFAAIAGAGPLVGPVLAAQMGYTPGMLWILAGVVFAGAVQDFIVLFISTRRDGRSLGDLVKMELGTVPG VIALFGAFLIMVIILAVLALIVVKALTNSPWGTFTVAATIPIALFMGVYTRFIRPGRIGEVSIIGFVLLMASIAYGQHVH DSPTLAAWFTFSGTQLTWILIGYGFVASVLPVWLLLAPRDYLSTFLKVGTIVGLAIGILIVAPELKMPALTKFVDGTGPV WSGNLFPFLFITIACGAVSGFHALISSGTTPKLIDNETNARFIGYGAMLMESFVAIMALVAACVIEPGIYFAMNAPAAVL GSTPEAVANTVTQWGFVLTPDMLTQTAKAVGETTIIARAGGAPTLAVGMAHILHQVIGGEAMMAFWYHFAILFEALFILT AVDAGTRAGRFMLQDLLGTFHPALKRTESLPANLIATGLCVAAWGYFLYQGVVDPLGGINTLWPLFGISNQMLAAIALVL GTVVLFKMKRERYAWVTIVPTAWLLICTLTAGWQKIFDANPKVSFLAHAAKLQAAVDEGKVLAPAKSIAQMKRIIFNDYV DAALAGLFILVVVSIAVYGLIAVLRARREAKPTVRETPYEAMPAAQALGSGR >Mature_692_residues MNRASSTLIWIAVALLGAFAFGTIALAHGERVSALWIVIAAVCVYLIAYRFYSRFIASKVMQLDGLRMTPAVKYNDGLDY VPTNKYVLFGHHFAAIAGAGPLVGPVLAAQMGYTPGMLWILAGVVFAGAVQDFIVLFISTRRDGRSLGDLVKMELGTVPG VIALFGAFLIMVIILAVLALIVVKALTNSPWGTFTVAATIPIALFMGVYTRFIRPGRIGEVSIIGFVLLMASIAYGQHVH DSPTLAAWFTFSGTQLTWILIGYGFVASVLPVWLLLAPRDYLSTFLKVGTIVGLAIGILIVAPELKMPALTKFVDGTGPV WSGNLFPFLFITIACGAVSGFHALISSGTTPKLIDNETNARFIGYGAMLMESFVAIMALVAACVIEPGIYFAMNAPAAVL GSTPEAVANTVTQWGFVLTPDMLTQTAKAVGETTIIARAGGAPTLAVGMAHILHQVIGGEAMMAFWYHFAILFEALFILT AVDAGTRAGRFMLQDLLGTFHPALKRTESLPANLIATGLCVAAWGYFLYQGVVDPLGGINTLWPLFGISNQMLAAIALVL GTVVLFKMKRERYAWVTIVPTAWLLICTLTAGWQKIFDANPKVSFLAHAAKLQAAVDEGKVLAPAKSIAQMKRIIFNDYV DAALAGLFILVVVSIAVYGLIAVLRARREAKPTVRETPYEAMPAAQALGSGR
Specific function: Peptide utilization during carbon starvation [H]
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CstA family [H]
Homologues:
Organism=Escherichia coli, GI1786814, Length=689, Percent_Identity=69.9564586357039, Blast_Score=979, Evalue=0.0, Organism=Escherichia coli, GI87082431, Length=697, Percent_Identity=63.9885222381636, Blast_Score=884, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003706 [H]
Pfam domain/function: PF02554 CstA [H]
EC number: NA
Molecular weight: Translated: 74006; Mature: 74006
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRASSTLIWIAVALLGAFAFGTIALAHGERVSALWIVIAAVCVYLIAYRFYSRFIASKV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQLDGLRMTPAVKYNDGLDYVPTNKYVLFGHHFAAIAGAGPLVGPVLAAQMGYTPGMLWI HHHCCCCCCCCEEECCCCCCCCCCCEEEEECHHHHHHCCCCHHHHHHHHHCCCCCHHHHH LAGVVFAGAVQDFIVLFISTRRDGRSLGDLVKMELGTVPGVIALFGAFLIMVIILAVLAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IVVKALTNSPWGTFTVAATIPIALFMGVYTRFIRPGRIGEVSIIGFVLLMASIAYGQHVH HHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC DSPTLAAWFTFSGTQLTWILIGYGFVASVLPVWLLLAPRDYLSTFLKVGTIVGLAIGILI CCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VAPELKMPALTKFVDGTGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKLIDNETNA CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC RFIGYGAMLMESFVAIMALVAACVIEPGIYFAMNAPAAVLGSTPEAVANTVTQWGFVLTP EEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHCCCEECH DMLTQTAKAVGETTIIARAGGAPTLAVGMAHILHQVIGGEAMMAFWYHFAILFEALFILT HHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AVDAGTRAGRFMLQDLLGTFHPALKRTESLPANLIATGLCVAAWGYFLYQGVVDPLGGIN HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH TLWPLFGISNQMLAAIALVLGTVVLFKMKRERYAWVTIVPTAWLLICTLTAGWQKIFDAN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC PKVSFLAHAAKLQAAVDEGKVLAPAKSIAQMKRIIFNDYVDAALAGLFILVVVSIAVYGL CCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVLRARREAKPTVRETPYEAMPAAQALGSGR HHHHHHHHHCCCCHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure MNRASSTLIWIAVALLGAFAFGTIALAHGERVSALWIVIAAVCVYLIAYRFYSRFIASKV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQLDGLRMTPAVKYNDGLDYVPTNKYVLFGHHFAAIAGAGPLVGPVLAAQMGYTPGMLWI HHHCCCCCCCCEEECCCCCCCCCCCEEEEECHHHHHHCCCCHHHHHHHHHCCCCCHHHHH LAGVVFAGAVQDFIVLFISTRRDGRSLGDLVKMELGTVPGVIALFGAFLIMVIILAVLAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IVVKALTNSPWGTFTVAATIPIALFMGVYTRFIRPGRIGEVSIIGFVLLMASIAYGQHVH HHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC DSPTLAAWFTFSGTQLTWILIGYGFVASVLPVWLLLAPRDYLSTFLKVGTIVGLAIGILI CCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VAPELKMPALTKFVDGTGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKLIDNETNA CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC RFIGYGAMLMESFVAIMALVAACVIEPGIYFAMNAPAAVLGSTPEAVANTVTQWGFVLTP EEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHCCCEECH DMLTQTAKAVGETTIIARAGGAPTLAVGMAHILHQVIGGEAMMAFWYHFAILFEALFILT HHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AVDAGTRAGRFMLQDLLGTFHPALKRTESLPANLIATGLCVAAWGYFLYQGVVDPLGGIN HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH TLWPLFGISNQMLAAIALVLGTVVLFKMKRERYAWVTIVPTAWLLICTLTAGWQKIFDAN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC PKVSFLAHAAKLQAAVDEGKVLAPAKSIAQMKRIIFNDYVDAALAGLFILVVVSIAVYGL CCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVLRARREAKPTVRETPYEAMPAAQALGSGR HHHHHHHHHCCCCHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1848300; 9278503; 2521622 [H]