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The map label for this gene is ybfM [H]

Identifier: 189354003

GI number: 189354003

Start: 2330335

End: 2331330

Strand: Direct

Name: ybfM [H]

Synonym: BMULJ_05256

Alternate gene names: 189354003

Gene position: 2330335-2331330 (Clockwise)

Preceding gene: 189354002

Following gene: 189354011

Centisome position: 94.22

GC content: 69.88

Gene sequence:

>996_bases
ATGCTTCGTGATCTCGTCGCCCAGTACGGGCCGCTTCTCGTATTCGCCAACGTGCTCGCGGCGGCGATCGGCCTGCCCGT
GCCCGCGATGCCGACGCTCGTGCTGTTCGGCGCGATGGCCGCGATGCACCCGGCGATGATCGGCTCGCAGCTCGCGACGG
TGATCGCGCTGTCGGTGCTCGGCGCACTGCTCGGCGATACGGTCTGGTACGTCGCAGGGCGCCGTTACGGCGGCGCGACG
CTGAAGACGATCTGCCGGCTGTCGCTGTCGCGCGACACCTGCGTGAAGAAAACCGAGCGCTTCTTCGGCCGCTACGGCGT
GCGCGTGCTCGCGGTAGCACGCTTCATTCCCGGACTGTCGCTGGTATCGGTGCCGATGGCGGGCGCGCTGCATACGCGCT
ATCGGACCTTCGTCGGCTACGACGCGCTCGGCGCCGCGCTCTGGACGATCGCCGGCCTCGTCGCTGGGCTCGTGTTCTAT
CGGCAGATCGACTGGCTGTTCGCGGGCGCGAGCCGGCTCGGTCATGCGGTGCTGGTCGTCATCATCGCGCTGCTCGCCGT
CTATGCGGCGATTCGCTGGGTGCGCCGCCGCGCGCTGATCCGCCAGCTCGCGCATGCGCGGATCGGCGTCGACGAGCTCG
ATGCCTTGCTGCGCGACGACGCGGCACCGGTGATTCTCGACGTGCGCTCGCCCGAGCACCGCAAGCTCGATCCGTTCACG
ATTCCCGGCGCGCAGTTCGCCGACGAACGCCAGATCGCCGACATCGTCGCGCGCTATCCGCTCACGCAGAAGTTCGTCGT
CTATTGCTCGTGCCCGAACGAGGTGACGGCCGCGCTGATGGCGAAGCGCCTGCTCGACGCGGGCTTCACCGACGCGCTCG
CGCTGCGCGGCGGCCTCGACGCCTGGCGCGACACCGGTCGCGAACTGGCGTCGCTCGCGACCGATCTGCCGCCGGCCGCG
AACGAGCCGGTCGCCGGGCTGCACAAGCCCGCGTAA

Upstream 100 bases:

>100_bases
CGTGAGGCGCTTTCCGTCATTCCCGCCGCCGTCTTGAAAATGGCCGATAATCGGCCCATCTGCGCACCCTGCCTGCGCAT
GTTCTTTTCGGCCAGCCGTC

Downstream 100 bases:

>100_bases
GCGCGCGCCGCGCAGCGGCGACGCGGCGGCGCGCGCCGGCGCCATGCGATCAGAACGCGTGCAGCGGCAGGTTCACGACC
AGACGGTACTCGCGGTTCGT

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLRDLVAQYGPLLVFANVLAAAIGLPVPAMPTLVLFGAMAAMHPAMIGSQLATVIALSVLGALLGDTVWYVAGRRYGGAT
LKTICRLSLSRDTCVKKTERFFGRYGVRVLAVARFIPGLSLVSVPMAGALHTRYRTFVGYDALGAALWTIAGLVAGLVFY
RQIDWLFAGASRLGHAVLVVIIALLAVYAAIRWVRRRALIRQLAHARIGVDELDALLRDDAAPVILDVRSPEHRKLDPFT
IPGAQFADERQIADIVARYPLTQKFVVYCSCPNEVTAALMAKRLLDAGFTDALALRGGLDAWRDTGRELASLATDLPPAA
NEPVAGLHKPA

Sequences:

>Translated_331_residues
MLRDLVAQYGPLLVFANVLAAAIGLPVPAMPTLVLFGAMAAMHPAMIGSQLATVIALSVLGALLGDTVWYVAGRRYGGAT
LKTICRLSLSRDTCVKKTERFFGRYGVRVLAVARFIPGLSLVSVPMAGALHTRYRTFVGYDALGAALWTIAGLVAGLVFY
RQIDWLFAGASRLGHAVLVVIIALLAVYAAIRWVRRRALIRQLAHARIGVDELDALLRDDAAPVILDVRSPEHRKLDPFT
IPGAQFADERQIADIVARYPLTQKFVVYCSCPNEVTAALMAKRLLDAGFTDALALRGGLDAWRDTGRELASLATDLPPAA
NEPVAGLHKPA
>Mature_331_residues
MLRDLVAQYGPLLVFANVLAAAIGLPVPAMPTLVLFGAMAAMHPAMIGSQLATVIALSVLGALLGDTVWYVAGRRYGGAT
LKTICRLSLSRDTCVKKTERFFGRYGVRVLAVARFIPGLSLVSVPMAGALHTRYRTFVGYDALGAALWTIAGLVAGLVFY
RQIDWLFAGASRLGHAVLVVIIALLAVYAAIRWVRRRALIRQLAHARIGVDELDALLRDDAAPVILDVRSPEHRKLDPFT
IPGAQFADERQIADIVARYPLTQKFVVYCSCPNEVTAALMAKRLLDAGFTDALALRGGLDAWRDTGRELASLATDLPPAA
NEPVAGLHKPA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=164, Percent_Identity=30.4878048780488, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 35649; Mature: 35649

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDLVAQYGPLLVFANVLAAAIGLPVPAMPTLVLFGAMAAMHPAMIGSQLATVIALSVL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALLGDTVWYVAGRRYGGATLKTICRLSLSRDTCVKKTERFFGRYGVRVLAVARFIPGLS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LVSVPMAGALHTRYRTFVGYDALGAALWTIAGLVAGLVFYRQIDWLFAGASRLGHAVLVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIALLAVYAAIRWVRRRALIRQLAHARIGVDELDALLRDDAAPVILDVRSPEHRKLDPFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC
IPGAQFADERQIADIVARYPLTQKFVVYCSCPNEVTAALMAKRLLDAGFTDALALRGGLD
CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCHH
AWRDTGRELASLATDLPPAANEPVAGLHKPA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRDLVAQYGPLLVFANVLAAAIGLPVPAMPTLVLFGAMAAMHPAMIGSQLATVIALSVL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALLGDTVWYVAGRRYGGATLKTICRLSLSRDTCVKKTERFFGRYGVRVLAVARFIPGLS
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LVSVPMAGALHTRYRTFVGYDALGAALWTIAGLVAGLVFYRQIDWLFAGASRLGHAVLVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIALLAVYAAIRWVRRRALIRQLAHARIGVDELDALLRDDAAPVILDVRSPEHRKLDPFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC
IPGAQFADERQIADIVARYPLTQKFVVYCSCPNEVTAALMAKRLLDAGFTDALALRGGLD
CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCHH
AWRDTGRELASLATDLPPAANEPVAGLHKPA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]