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The map label for this gene is yfdE [H]

Identifier: 189353981

GI number: 189353981

Start: 2301790

End: 2302839

Strand: Reverse

Name: yfdE [H]

Synonym: BMULJ_05234

Alternate gene names: 189353981

Gene position: 2302839-2301790 (Counterclockwise)

Preceding gene: 189353982

Following gene: 189353979

Centisome position: 93.11

GC content: 72.38

Gene sequence:

>1050_bases
ATGTCGCTTGACGCACCGCTTTCCGGCGTCCACATCGTCGAATTCGAAGGCCTCGGCCCCGGCCCGCTCGCCGGATGGAT
GCTCGCCGGCATGGGCGCGCGCATCACGCTGGTCGCGCGTCCCGCCGGGCGCTCGAGCGCGCCCGATGCCTTGCGCAGCC
GCGACGGCGATCTGCTGCGCGAAGGCAAGACGATCGTCGAACTCGATCTGAAGTCCGCCGCCGGCCGCGAGGCCGCACTG
GACCTCGTCGCGCACGCCGATGCGCTGATCGAGGGGCTGCGCCCCGGCGCGATGGAGCGCGTCGGCCTCGGCCCCGACGC
CTGCGCGCGCCGCAATCCGAAGCTCGTCTACGCGCGGATGACCGGCTGGGGCCAGCACGGCCCGCTCGCGTCGGCCGCCG
GACACGATCTGAACTATGTCGCGCTCACGGGGATGCTGTCGCTGTCCGCGCCTTGCGACGGCCGGCCGGGCCTGCCGCCG
ACCGTCGTCGGCGATGCGGGCGGCGCGCTCGGCCTCGCGTTCGGCATCGTCTGCGCGCTGTTCGACGTGCGCGCGGGCGG
GCCCGGCCGCGCCGTCGACGGCGCGATCGTCGACATCGTGTCGATGCTCGGCACGCTCGCGCTATGGGCGCGCGCCAACG
GCCAGCTCGACGGCGCGCAGCCGAGCCTGTTCCACGACGCGCCGTTCTACGACGTGTATCGCTGCGCCGACGGGGAATGC
GTGACGATCGGCGCGCTCGAACCGCCGTTCTATGCGCTATTGATCGAACGGCTCGGGCTGACCGACGTCGATCCCGCCTC
GCAGTACGACCGCACGCGCTGGCCCGCGCTGAAGGCGCGTTTCGCGGAGGTATTCGCGCAGCATCCGTCTCCGCATTGGC
GCGCGCTGCTCGAAGGGACCGACGCGTGCTTCGCGCCGGTGCTGAGCGTCGCCGACGCGGCCGATCATCCGCACAACGTC
GCGCGCGGCCTCTATCGCACCGACCGCGACGGCAATCTGCGGGCGCGCGTGGCGCCGCGATTCATGCCGTTGAACGACGA
TTCCGCGTGA

Upstream 100 bases:

>100_bases
GAGCGGCGTGCGAGCGCGAATGTCGATCGACCGCGACGCACGGGTTCGGCGCAGATGTTGAAGCGTCCACGCCGACCGGC
CGCGAAGACGGGAGAACCGC

Downstream 100 bases:

>100_bases
GGCGACGCGCGATCCGGCGTGACGGCGAGACCGCGAGACCGCGAGACGGCGAGACGGCCTGACGCACCGCGCCCTGCCGA
CGACCGCGCCGACGCATGCC

Product: predicted acyl-CoA transferase/carnitine dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSLDAPLSGVHIVEFEGLGPGPLAGWMLAGMGARITLVARPAGRSSAPDALRSRDGDLLREGKTIVELDLKSAAGREAAL
DLVAHADALIEGLRPGAMERVGLGPDACARRNPKLVYARMTGWGQHGPLASAAGHDLNYVALTGMLSLSAPCDGRPGLPP
TVVGDAGGALGLAFGIVCALFDVRAGGPGRAVDGAIVDIVSMLGTLALWARANGQLDGAQPSLFHDAPFYDVYRCADGEC
VTIGALEPPFYALLIERLGLTDVDPASQYDRTRWPALKARFAEVFAQHPSPHWRALLEGTDACFAPVLSVADAADHPHNV
ARGLYRTDRDGNLRARVAPRFMPLNDDSA

Sequences:

>Translated_349_residues
MSLDAPLSGVHIVEFEGLGPGPLAGWMLAGMGARITLVARPAGRSSAPDALRSRDGDLLREGKTIVELDLKSAAGREAAL
DLVAHADALIEGLRPGAMERVGLGPDACARRNPKLVYARMTGWGQHGPLASAAGHDLNYVALTGMLSLSAPCDGRPGLPP
TVVGDAGGALGLAFGIVCALFDVRAGGPGRAVDGAIVDIVSMLGTLALWARANGQLDGAQPSLFHDAPFYDVYRCADGEC
VTIGALEPPFYALLIERLGLTDVDPASQYDRTRWPALKARFAEVFAQHPSPHWRALLEGTDACFAPVLSVADAADHPHNV
ARGLYRTDRDGNLRARVAPRFMPLNDDSA
>Mature_348_residues
SLDAPLSGVHIVEFEGLGPGPLAGWMLAGMGARITLVARPAGRSSAPDALRSRDGDLLREGKTIVELDLKSAAGREAALD
LVAHADALIEGLRPGAMERVGLGPDACARRNPKLVYARMTGWGQHGPLASAAGHDLNYVALTGMLSLSAPCDGRPGLPPT
VVGDAGGALGLAFGIVCALFDVRAGGPGRAVDGAIVDIVSMLGTLALWARANGQLDGAQPSLFHDAPFYDVYRCADGECV
TIGALEPPFYALLIERLGLTDVDPASQYDRTRWPALKARFAEVFAQHPSPHWRALLEGTDACFAPVLSVADAADHPHNVA
RGLYRTDRDGNLRARVAPRFMPLNDDSA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI42794625, Length=343, Percent_Identity=39.6501457725948, Blast_Score=238, Evalue=5e-63,
Organism=Homo sapiens, GI266456254, Length=343, Percent_Identity=39.6501457725948, Blast_Score=238, Evalue=7e-63,
Organism=Homo sapiens, GI266458393, Length=263, Percent_Identity=41.06463878327, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI266458397, Length=260, Percent_Identity=40.7692307692308, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI266458395, Length=138, Percent_Identity=42.0289855072464, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI42822893, Length=138, Percent_Identity=42.0289855072464, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI300863124, Length=339, Percent_Identity=24.7787610619469, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI300863128, Length=339, Percent_Identity=24.7787610619469, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI300863126, Length=337, Percent_Identity=21.6617210682493, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI87082093, Length=338, Percent_Identity=29.8816568047337, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1788717, Length=221, Percent_Identity=28.0542986425339, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1786222, Length=356, Percent_Identity=26.685393258427, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115535051, Length=340, Percent_Identity=31.1764705882353, Blast_Score=168, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI32564160, Length=345, Percent_Identity=32.1739130434783, Blast_Score=162, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24585488, Length=335, Percent_Identity=36.1194029850746, Blast_Score=210, Evalue=9e-55,
Organism=Drosophila melanogaster, GI24648431, Length=338, Percent_Identity=25.1479289940828, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 36677; Mature: 36546

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDAPLSGVHIVEFEGLGPGPLAGWMLAGMGARITLVARPAGRSSAPDALRSRDGDLLR
CCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCCHHHH
EGKTIVELDLKSAAGREAALDLVAHADALIEGLRPGAMERVGLGPDACARRNPKLVYARM
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHCCCCCEEEEEE
TGWGQHGPLASAAGHDLNYVALTGMLSLSAPCDGRPGLPPTVVGDAGGALGLAFGIVCAL
CCCCCCCCCCHHCCCCCEEEEEEHHHEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHH
FDVRAGGPGRAVDGAIVDIVSMLGTLALWARANGQLDGAQPSLFHDAPFYDVYRCADGEC
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEECCCCCE
VTIGALEPPFYALLIERLGLTDVDPASQYDRTRWPALKARFAEVFAQHPSPHWRALLEGT
EEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCC
DACFAPVLSVADAADHPHNVARGLYRTDRDGNLRARVAPRFMPLNDDSA
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCC
>Mature Secondary Structure 
SLDAPLSGVHIVEFEGLGPGPLAGWMLAGMGARITLVARPAGRSSAPDALRSRDGDLLR
CCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCCHHHH
EGKTIVELDLKSAAGREAALDLVAHADALIEGLRPGAMERVGLGPDACARRNPKLVYARM
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHCCCCCEEEEEE
TGWGQHGPLASAAGHDLNYVALTGMLSLSAPCDGRPGLPPTVVGDAGGALGLAFGIVCAL
CCCCCCCCCCHHCCCCCEEEEEEHHHEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHH
FDVRAGGPGRAVDGAIVDIVSMLGTLALWARANGQLDGAQPSLFHDAPFYDVYRCADGEC
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEECCCCCE
VTIGALEPPFYALLIERLGLTDVDPASQYDRTRWPALKARFAEVFAQHPSPHWRALLEGT
EEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHCCC
DACFAPVLSVADAADHPHNVARGLYRTDRDGNLRARVAPRFMPLNDDSA
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]