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The map label for this gene is arpC [H]

Identifier: 189353899

GI number: 189353899

Start: 2206881

End: 2208416

Strand: Reverse

Name: arpC [H]

Synonym: BMULJ_05151

Alternate gene names: 189353899

Gene position: 2208416-2206881 (Counterclockwise)

Preceding gene: 189353900

Following gene: 189353894

Centisome position: 89.3

GC content: 69.53

Gene sequence:

>1536_bases
ATGGACAACATGCACAACACAAACGGCCTGATGCGCATCGCGAAGGTGGCGGCCGCGAGCACGCTGCTCGCGACGCTGCT
CGCCGCGTGCGCGGTGGGCCCCGACTACAAGCGCCCGGACGTCACGACGCCCGCGGCGTTCAAGGAAGCGCCGACGCTCG
CACCCGGCGAGCAGGCCGGTACTTGGAAGCCGGCCGAGCCGGCCGACGGCGCGCATCGCGGCGAATGGTGGAAGGTGTTC
GGGGATCCCGTGCTCGACGCGCTCGAGGAACAGGCGCTCGCCGCGAACCAGAACCTGAAGGCCGCGGCCGCACGCGTCGA
GGAGGCGCGCGCCGCGACGCGCACTGCGCGCTCGCAGTGGTTCCCGCAGGTCGGCGTCGGCTTCGGGCCGACGCGCGAAG
GGCTCTCGTCGGCGTCGCAGTTCCAGCCGCAGGGCACAGGGCCGACCAATGCGACGCTGTGGCGCGCGCAGGGCACCGTG
TCATACGAGGCCGACCTGTTCGGCCGCGTGAGCCGCAACGTCGAAGCGTCGCGCGCCGATCAGGCGCAGAGCGAAGCGCT
GTTCCGTTCGGTGCAGCTCGCGCTGCAGGCCGACGTCGCGCAGAACTACTTCGAACTGCGCCAGCTCGATTCGGATCAGG
ACCTGTACCGCCGCACGGTGGAGCTGCGCGAGGAAGCGCTGAAGCTCGTGCAGCGCCGGTTCAACGAAGGCGACATCAGC
GAGCTCGACGTGTCGCGTGCGAAGAACGAGCTTGCGTCCGCGCAGGCCGATGCGGTCGGCGTCGCGCGCCGGCGCGCGGC
GTCCGAACATGCGCTCGCGATTCTGCTCGGTAAGGCGCCGGCCGATTTCGCGTTCAAGGAAACGCCGCTCGTGCCGGTCG
CGGTGAAGATTCCGCCGGGATTGCCGTCCGCGCTGCTCGAACGCCGTCCGGACGTCGCGGCGGCCGAGCGTGCGATGGCA
GCTGCGAACGCACGGATCGGGCTCGCGAAGTCCGCGTATTTCCCGAAGCTCGACATCACCGGATCGTTCGGCTATGAAGC
GTCGACGCTCGGCAACCTGTTCCTGTGGTCGAGCCGCACGTTCCTGCTCGGACCGTTCGCGGGCACCGCGTTGACGCTGC
CGCTGTTCGACGGCGGACGCCGCGCAGCCGGCGTGCAGCAGGCGCGCGCGCAGTACGACGAACAGGTCGCGAACTATCGG
CAGCAGGTGCTCGTCGCGTTCCGCGAGGTCGAGGACAATCTCGCCGATCTGCGGCTGCTCGACGATCAGATTCGCGCGCA
GAATGCGGCCGTCAATGCGTCGCGCCGTGCGGCGACGCTGTCGCGGACGCAGTATCAGGAAGGCGAAGTCGCGTATCTCG
ACGTGATCGATAGTGAGCGGTCCGTGTTGCAGTCGCAGTTGCAGGCGAATCAGCTCACGGGTGCGCAGGCCGTGTCGACC
GTCAACCTCATCCGTGCACTTGGTGGCGGGTGGGGTGAGGCGCCGACGGCGGTCGACGGGGCGGCGGCGGCCAAGGCGGA
GATCGCGGGGCGTTGA

Upstream 100 bases:

>100_bases
TACGTCGTGCTGCGCACGCTCGCGGGCGGCAAGATTCACGTCGCCGGCAAGGATTCGGCCGGTTACGGCGTGCCCGCACC
GGATGCTTGAGGACAACAAG

Downstream 100 bases:

>100_bases
CGCGTCGACGCGCGTGGCGGCTCGCGGCGGGCCGCCGCGCCACATGAAGTTCAACCCGCCCCGATCCGCGGTGACGCGGA
TCGGGATTGCAACTTCCCGC

Product: RND efflux system outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MDNMHNTNGLMRIAKVAAASTLLATLLAACAVGPDYKRPDVTTPAAFKEAPTLAPGEQAGTWKPAEPADGAHRGEWWKVF
GDPVLDALEEQALAANQNLKAAAARVEEARAATRTARSQWFPQVGVGFGPTREGLSSASQFQPQGTGPTNATLWRAQGTV
SYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDSDQDLYRRTVELREEALKLVQRRFNEGDIS
ELDVSRAKNELASAQADAVGVARRRAASEHALAILLGKAPADFAFKETPLVPVAVKIPPGLPSALLERRPDVAAAERAMA
AANARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRAAGVQQARAQYDEQVANYR
QQVLVAFREVEDNLADLRLLDDQIRAQNAAVNASRRAATLSRTQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVST
VNLIRALGGGWGEAPTAVDGAAAAKAEIAGR

Sequences:

>Translated_511_residues
MDNMHNTNGLMRIAKVAAASTLLATLLAACAVGPDYKRPDVTTPAAFKEAPTLAPGEQAGTWKPAEPADGAHRGEWWKVF
GDPVLDALEEQALAANQNLKAAAARVEEARAATRTARSQWFPQVGVGFGPTREGLSSASQFQPQGTGPTNATLWRAQGTV
SYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDSDQDLYRRTVELREEALKLVQRRFNEGDIS
ELDVSRAKNELASAQADAVGVARRRAASEHALAILLGKAPADFAFKETPLVPVAVKIPPGLPSALLERRPDVAAAERAMA
AANARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRAAGVQQARAQYDEQVANYR
QQVLVAFREVEDNLADLRLLDDQIRAQNAAVNASRRAATLSRTQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVST
VNLIRALGGGWGEAPTAVDGAAAAKAEIAGR
>Mature_511_residues
MDNMHNTNGLMRIAKVAAASTLLATLLAACAVGPDYKRPDVTTPAAFKEAPTLAPGEQAGTWKPAEPADGAHRGEWWKVF
GDPVLDALEEQALAANQNLKAAAARVEEARAATRTARSQWFPQVGVGFGPTREGLSSASQFQPQGTGPTNATLWRAQGTV
SYEADLFGRVSRNVEASRADQAQSEALFRSVQLALQADVAQNYFELRQLDSDQDLYRRTVELREEALKLVQRRFNEGDIS
ELDVSRAKNELASAQADAVGVARRRAASEHALAILLGKAPADFAFKETPLVPVAVKIPPGLPSALLERRPDVAAAERAMA
AANARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRTFLLGPFAGTALTLPLFDGGRRAAGVQQARAQYDEQVANYR
QQVLVAFREVEDNLADLRLLDDQIRAQNAAVNASRRAATLSRTQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVST
VNLIRALGGGWGEAPTAVDGAAAAKAEIAGR

Specific function: The outer membrane component of an antibiotic efflux pump. Confers resistance to numerous structurally unrelated antibiotics such as carbenicillin, chloramphenicol, erythromycin, novobiocin, streptomycin and tetracycline. Is not involved in organic solven

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=476, Percent_Identity=31.3025210084034, Blast_Score=195, Evalue=6e-51,
Organism=Escherichia coli, GI2367348, Length=440, Percent_Identity=27.2727272727273, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 54810; Mature: 54810

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNMHNTNGLMRIAKVAAASTLLATLLAACAVGPDYKRPDVTTPAAFKEAPTLAPGEQAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
TWKPAEPADGAHRGEWWKVFGDPVLDALEEQALAANQNLKAAAARVEEARAATRTARSQW
CCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
FPQVGVGFGPTREGLSSASQFQPQGTGPTNATLWRAQGTVSYEADLFGRVSRNVEASRAD
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHCCCCHHHHH
QAQSEALFRSVQLALQADVAQNYFELRQLDSDQDLYRRTVELREEALKLVQRRFNEGDIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ELDVSRAKNELASAQADAVGVARRRAASEHALAILLGKAPADFAFKETPLVPVAVKIPPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCC
LPSALLERRPDVAAAERAMAAANARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRT
CHHHHHHCCCCHHHHHHHHHHHCCCCEEHHCCCCCCEEECCCCCCCHHHHCCEEEECCCC
FLLGPFAGTALTLPLFDGGRRAAGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLL
EEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDQIRAQNAAVNASRRAATLSRTQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVST
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHH
VNLIRALGGGWGEAPTAVDGAAAAKAEIAGR
HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDNMHNTNGLMRIAKVAAASTLLATLLAACAVGPDYKRPDVTTPAAFKEAPTLAPGEQAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
TWKPAEPADGAHRGEWWKVFGDPVLDALEEQALAANQNLKAAAARVEEARAATRTARSQW
CCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
FPQVGVGFGPTREGLSSASQFQPQGTGPTNATLWRAQGTVSYEADLFGRVSRNVEASRAD
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHCCCCHHHHH
QAQSEALFRSVQLALQADVAQNYFELRQLDSDQDLYRRTVELREEALKLVQRRFNEGDIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
ELDVSRAKNELASAQADAVGVARRRAASEHALAILLGKAPADFAFKETPLVPVAVKIPPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCC
LPSALLERRPDVAAAERAMAAANARIGLAKSAYFPKLDITGSFGYEASTLGNLFLWSSRT
CHHHHHHCCCCHHHHHHHHHHHCCCCEEHHCCCCCCEEECCCCCCCHHHHCCEEEECCCC
FLLGPFAGTALTLPLFDGGRRAAGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLL
EEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDQIRAQNAAVNASRRAATLSRTQYQEGEVAYLDVIDSERSVLQSQLQANQLTGAQAVST
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHH
VNLIRALGGGWGEAPTAVDGAAAAKAEIAGR
HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11160799 [H]