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The map label for this gene is rbsC [H]

Identifier: 189353711

GI number: 189353711

Start: 1974748

End: 1975761

Strand: Reverse

Name: rbsC [H]

Synonym: BMULJ_04956

Alternate gene names: 189353711

Gene position: 1975761-1974748 (Counterclockwise)

Preceding gene: 189353712

Following gene: 189353710

Centisome position: 79.89

GC content: 66.77

Gene sequence:

>1014_bases
ATGCGTAACCTGCACACACTCGGCATTGGTTCGATCGAGGCGCTGCTGCTGGCCGTCATTGCTGCAATGGCGATCGGCCT
CGGCCTCTCGACGTCGACGTTCCTCACGCTGCCGAACCTGTTCGACCTGCTGAACCAGAGTTCCGTGAACCTGATCTTCG
CGGTCGGACTGCTGGTCGTGCTCGTGGCGGGCGGCATCGACATCTCGTTCGCAGTCGGCGCGTCGGTGGTGCAGTATCTG
ACCGCGCTCGCAATGCTGCGGCTCGGCGGCGGCAACTGGGCGCTCGGTGTCGCCGCGGCGGCCGGCTTCGGGTTCCTGCT
CGGCGCCGTGAATGCGACGATCATCTATCGGTTTCGCGTCGTGTCGATCGTCGCGACGATCGCGACGTTCAACGTGTTCT
TCGGCGGCCTGATGTTCGCGACGGGCGGCGTGTCGATCTACGATTTGCCGGACTGGTGGATGAACCGGATTTCGCTGCTG
CACGTCGATACGCCGAGCGGCGCGGCCGATCTCGCACTGCCGGTCGCGGCGATGCTCGTCGCTGTCGGCGCGACCTGGTT
CCTGCTACAGCGCACGACGCTCGGTCGTCAGCTCTACGCGGCCGGCGACAACGCGGAGGCCGCGCGGCGCGTCGGCATCT
CTCTCGGCACGATGCACTACGTCGCATACGGCTGGCTCGGGATGATGGCCGGCATCGCCGGCCTGATGCAGGCGCACTAC
GTGCAGGAAGTGGTGCCCAACGCGCTGTACGGACGCGAGCTCGACGTGCTGGCCGCCGTCGTGCTCGGTGGTGCGCGGCT
CGGCGGCGGTCGCGGCACGGTGCTCGGCGCGATCCTCGGGATCGTCCTCGTGTCGATTGCCGCAAACGGCCTGAACCTGC
TCGGCGTGTCGCCGTATGCGTTCAAGATGATCGTCGGCGCCGTGATCCTGATCGCGATCACGCTGTCGAGCGATCGCGTC
GCGCGACTCATCGGTTCGCGCTTTCCATCGTCGACTGCGAGGGCGCCATCGTGA

Upstream 100 bases:

>100_bases
TATTTCAACGCCGACCGGATCCTGCACATGCGCGGCGGCCGCATCGTCGCCGACTATGTACCGGGCCGTACTTCCATCGG
CGAGATCGAGCGAGACGTCC

Downstream 100 bases:

>100_bases
CCACGCGTTTTCATCGGCCTGCCGCGGCGTTGCCGATTCCCGCCGACGTCGCCGGCTTGCTCGGCTTCCTCGTATTCGTC
GTCGCCGCGATGAGCGTCGC

Product: simple sugar transport system permease protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRNLHTLGIGSIEALLLAVIAAMAIGLGLSTSTFLTLPNLFDLLNQSSVNLIFAVGLLVVLVAGGIDISFAVGASVVQYL
TALAMLRLGGGNWALGVAAAAGFGFLLGAVNATIIYRFRVVSIVATIATFNVFFGGLMFATGGVSIYDLPDWWMNRISLL
HVDTPSGAADLALPVAAMLVAVGATWFLLQRTTLGRQLYAAGDNAEAARRVGISLGTMHYVAYGWLGMMAGIAGLMQAHY
VQEVVPNALYGRELDVLAAVVLGGARLGGGRGTVLGAILGIVLVSIAANGLNLLGVSPYAFKMIVGAVILIAITLSSDRV
ARLIGSRFPSSTARAPS

Sequences:

>Translated_337_residues
MRNLHTLGIGSIEALLLAVIAAMAIGLGLSTSTFLTLPNLFDLLNQSSVNLIFAVGLLVVLVAGGIDISFAVGASVVQYL
TALAMLRLGGGNWALGVAAAAGFGFLLGAVNATIIYRFRVVSIVATIATFNVFFGGLMFATGGVSIYDLPDWWMNRISLL
HVDTPSGAADLALPVAAMLVAVGATWFLLQRTTLGRQLYAAGDNAEAARRVGISLGTMHYVAYGWLGMMAGIAGLMQAHY
VQEVVPNALYGRELDVLAAVVLGGARLGGGRGTVLGAILGIVLVSIAANGLNLLGVSPYAFKMIVGAVILIAITLSSDRV
ARLIGSRFPSSTARAPS
>Mature_337_residues
MRNLHTLGIGSIEALLLAVIAAMAIGLGLSTSTFLTLPNLFDLLNQSSVNLIFAVGLLVVLVAGGIDISFAVGASVVQYL
TALAMLRLGGGNWALGVAAAAGFGFLLGAVNATIIYRFRVVSIVATIATFNVFFGGLMFATGGVSIYDLPDWWMNRISLL
HVDTPSGAADLALPVAAMLVAVGATWFLLQRTTLGRQLYAAGDNAEAARRVGISLGTMHYVAYGWLGMMAGIAGLMQAHY
VQEVVPNALYGRELDVLAAVVLGGARLGGGRGTVLGAILGIVLVSIAANGLNLLGVSPYAFKMIVGAVILIAITLSSDRV
ARLIGSRFPSSTARAPS

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=322, Percent_Identity=34.472049689441, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788896, Length=307, Percent_Identity=28.9902280130293, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI145693152, Length=309, Percent_Identity=29.126213592233, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789992, Length=364, Percent_Identity=26.3736263736264, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1790524, Length=307, Percent_Identity=28.6644951140065, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787793, Length=288, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082395, Length=283, Percent_Identity=29.6819787985866, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788471, Length=331, Percent_Identity=28.7009063444109, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI145693214, Length=286, Percent_Identity=28.6713286713287, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34819; Mature: 34819

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLHTLGIGSIEALLLAVIAAMAIGLGLSTSTFLTLPNLFDLLNQSSVNLIFAVGLLVV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHHCCCCHHHHHHHHHHHH
LVAGGIDISFAVGASVVQYLTALAMLRLGGGNWALGVAAAAGFGFLLGAVNATIIYRFRV
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSIVATIATFNVFFGGLMFATGGVSIYDLPDWWMNRISLLHVDTPSGAADLALPVAAMLV
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCEEEEEEECCCCCHHHHHHHHHHHH
AVGATWFLLQRTTLGRQLYAAGDNAEAARRVGISLGTMHYVAYGWLGMMAGIAGLMQAHY
HHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQEVVPNALYGRELDVLAAVVLGGARLGGGRGTVLGAILGIVLVSIAANGLNLLGVSPYA
HHHHHCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHH
FKMIVGAVILIAITLSSDRVARLIGSRFPSSTARAPS
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRNLHTLGIGSIEALLLAVIAAMAIGLGLSTSTFLTLPNLFDLLNQSSVNLIFAVGLLVV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHHCCCCHHHHHHHHHHHH
LVAGGIDISFAVGASVVQYLTALAMLRLGGGNWALGVAAAAGFGFLLGAVNATIIYRFRV
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSIVATIATFNVFFGGLMFATGGVSIYDLPDWWMNRISLLHVDTPSGAADLALPVAAMLV
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCEEEEEEECCCCCHHHHHHHHHHHH
AVGATWFLLQRTTLGRQLYAAGDNAEAARRVGISLGTMHYVAYGWLGMMAGIAGLMQAHY
HHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQEVVPNALYGRELDVLAAVVLGGARLGGGRGTVLGAILGIVLVSIAANGLNLLGVSPYA
HHHHHCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHH
FKMIVGAVILIAITLSSDRVARLIGSRFPSSTARAPS
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]