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The map label for this gene is alsB [H]

Identifier: 189353671

GI number: 189353671

Start: 1933695

End: 1934636

Strand: Reverse

Name: alsB [H]

Synonym: BMULJ_04916

Alternate gene names: 189353671

Gene position: 1934636-1933695 (Counterclockwise)

Preceding gene: 189353672

Following gene: 189353670

Centisome position: 78.23

GC content: 64.23

Gene sequence:

>942_bases
GTGATCAGGAGCAAGGTGTTGAACGCGATCGTCGGGCTGACGTTCGCCGCGGGCATCGCGACCGGCGCGCACGCGCAGGA
AAGCTACATCCCGCTGATCTCGAAAGGCTTCCAGCATCAGTTCTGGCAGGCCGTGAAGTCGGGCGCGATGCAGGCCGCGA
ACGACTACCACGTGAGGGTGACGTTCGAAGGCCCCGAAACCGAGGCGATGGTCGACAAGCAGATCGACATGCTGTCCGCC
GCGATCGCGAAGAAACCGGCCGCGGTCGGCTTTGCCGCGCTCGACAGCAAGGCCGCGCTGCCGCTGCTGAAGAAGGCGCA
GGCCGAGAAGATTCCGGTGATCGCATTCGACTCGGGCGTCGACAGCGACATTCCCGTGACCACCGCGACGACCAACAACA
AGGCGGCCGCCGCGCTCGCCGCCGACAAGCTCGCCGCGCTGATCGGCGACGAAGGCCAGGTCGCCGTGGTCGCGCACGAC
CAGACGAGCCGCACCGGCATCGATCGACGCGACGGTTTTCTCGACCGGATGAAGGCCGCGCATCCGAAGGTGCAGGTCGT
CACCGTGCAGTACGGCGAAGGCGATCAATTGAAATCGACCGAGGTGACGAAGTCGATCCTGCAGGCCTATCCGAAGCTCA
AGGGGCTGTTCGGCACCAACGAAGGTTCGGCGATCGGCGTCGTCAACGGCGTGCGCGAGATGAAGCGCAAGGTCGTGATC
GTCGGCTACGATTCGGGCAAGCAGCAGAAGGACGCGATCCGCAGCGGGCTGATGGCCGGCGCGATCACGCAGAACCCGAT
CGGCATCGGCTACAAGACCGTCGAGGCCGCCGTGAAGGCGATCAAGGGCGAGAAGCTGCCGAAGGTCATCGATACCGGCT
TCTACTGGTACGACAAGACCAACATCGACGACCCGAAGATCAAGGCGGTGCTGTACGACTGA

Upstream 100 bases:

>100_bases
ACGTCGACATCCTGCGCCGGCGACGCCGCTGACGCACGCAGGCTGCGCTTCACCGCCGGCCGGGCCGGCATTCCAGCGGA
TATAACCAAGGAGACGCGAA

Downstream 100 bases:

>100_bases
ACGTTTAGGGCGACGTCGCGCGCGGCCGGGCACGCGTGCGGCCGCGCCGGACGACGGCATACGAGGACATCATGGGCGCA
CTGCGTATCGATTCCCATCA

Product: simple sugar transport system substrate-binding protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: ALBP [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MIRSKVLNAIVGLTFAAGIATGAHAQESYIPLISKGFQHQFWQAVKSGAMQAANDYHVRVTFEGPETEAMVDKQIDMLSA
AIAKKPAAVGFAALDSKAALPLLKKAQAEKIPVIAFDSGVDSDIPVTTATTNNKAAAALAADKLAALIGDEGQVAVVAHD
QTSRTGIDRRDGFLDRMKAAHPKVQVVTVQYGEGDQLKSTEVTKSILQAYPKLKGLFGTNEGSAIGVVNGVREMKRKVVI
VGYDSGKQQKDAIRSGLMAGAITQNPIGIGYKTVEAAVKAIKGEKLPKVIDTGFYWYDKTNIDDPKIKAVLYD

Sequences:

>Translated_313_residues
MIRSKVLNAIVGLTFAAGIATGAHAQESYIPLISKGFQHQFWQAVKSGAMQAANDYHVRVTFEGPETEAMVDKQIDMLSA
AIAKKPAAVGFAALDSKAALPLLKKAQAEKIPVIAFDSGVDSDIPVTTATTNNKAAAALAADKLAALIGDEGQVAVVAHD
QTSRTGIDRRDGFLDRMKAAHPKVQVVTVQYGEGDQLKSTEVTKSILQAYPKLKGLFGTNEGSAIGVVNGVREMKRKVVI
VGYDSGKQQKDAIRSGLMAGAITQNPIGIGYKTVEAAVKAIKGEKLPKVIDTGFYWYDKTNIDDPKIKAVLYD
>Mature_313_residues
MIRSKVLNAIVGLTFAAGIATGAHAQESYIPLISKGFQHQFWQAVKSGAMQAANDYHVRVTFEGPETEAMVDKQIDMLSA
AIAKKPAAVGFAALDSKAALPLLKKAQAEKIPVIAFDSGVDSDIPVTTATTNNKAAAALAADKLAALIGDEGQVAVVAHD
QTSRTGIDRRDGFLDRMKAAHPKVQVVTVQYGEGDQLKSTEVTKSILQAYPKLKGLFGTNEGSAIGVVNGVREMKRKVVI
VGYDSGKQQKDAIRSGLMAGAITQNPIGIGYKTVEAAVKAIKGEKLPKVIDTGFYWYDKTNIDDPKIKAVLYD

Specific function: Part of the binding-protein-dependent transport system AlsBAC for D-allose [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790526, Length=297, Percent_Identity=25.9259259259259, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790192, Length=289, Percent_Identity=25.6055363321799, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787795, Length=247, Percent_Identity=25.5060728744939, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 33343; Mature: 33343

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSKVLNAIVGLTFAAGIATGAHAQESYIPLISKGFQHQFWQAVKSGAMQAANDYHVRV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHCCCCCEEEEE
TFEGPETEAMVDKQIDMLSAAIAKKPAAVGFAALDSKAALPLLKKAQAEKIPVIAFDSGV
EECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCC
DSDIPVTTATTNNKAAAALAADKLAALIGDEGQVAVVAHDQTSRTGIDRRDGFLDRMKAA
CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHCCHHHHHHHC
HPKVQVVTVQYGEGDQLKSTEVTKSILQAYPKLKGLFGTNEGSAIGVVNGVREMKRKVVI
CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCEEEE
VGYDSGKQQKDAIRSGLMAGAITQNPIGIGYKTVEAAVKAIKGEKLPKVIDTGFYWYDKT
EEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCEEEEECC
NIDDPKIKAVLYD
CCCCCEEEEEEEC
>Mature Secondary Structure
MIRSKVLNAIVGLTFAAGIATGAHAQESYIPLISKGFQHQFWQAVKSGAMQAANDYHVRV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHCCCCCEEEEE
TFEGPETEAMVDKQIDMLSAAIAKKPAAVGFAALDSKAALPLLKKAQAEKIPVIAFDSGV
EECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCC
DSDIPVTTATTNNKAAAALAADKLAALIGDEGQVAVVAHDQTSRTGIDRRDGFLDRMKAA
CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHCCHHHHHHHC
HPKVQVVTVQYGEGDQLKSTEVTKSILQAYPKLKGLFGTNEGSAIGVVNGVREMKRKVVI
CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCEEEE
VGYDSGKQQKDAIRSGLMAGAITQNPIGIGYKTVEAAVKAIKGEKLPKVIDTGFYWYDKT
EEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCEEEEECC
NIDDPKIKAVLYD
CCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 8576032; 9401019; 10064713 [H]