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The map label for this gene is rbsC [H]

Identifier: 189353672

GI number: 189353672

Start: 1934705

End: 1935742

Strand: Reverse

Name: rbsC [H]

Synonym: BMULJ_04917

Alternate gene names: 189353672

Gene position: 1935742-1934705 (Counterclockwise)

Preceding gene: 189353673

Following gene: 189353671

Centisome position: 78.27

GC content: 67.44

Gene sequence:

>1038_bases
ATGTCCAACGATACGCATCCCGTTCCGCCCCTTGCTTCCGGCGACGCGCCGGCCGCCGCGTCGGGCCTTCGCGCGCGCCT
GTTCAATCCGGCGACGCGGCAGCGGCTGCTCGCGTTCGCGAGCCTCGTGCTGCTGATCGTGTTCTTCGGCGCCGCATCGC
CGAACTTCCTCGAAGTCGACAACCTCGTCGCGATCCTGCAGGCCACCGCGGTGAACGGCGTGCTGGCGGTCGCGTGCACG
TACGTGATCATCACCTCGGGCATCGATCTCTCGGTCGGCACGCTGATGACGTTCTGCGCGGTGATGGCCGGCGTCGTGCT
GACGAACTGGGGGATGCCGCTGCCGCTCGGGATCGCGGCCGCGCTCGGCTTCGGCGCGCTGTCGGGCTGCGTGTCCGGTT
TCGTGATCGCGAAGATGAAGGTGCCGCCGTTCATCGCGACGCTCGGCATGATGATGCTGCTCAAGGGGCTGTCGCTCGTG
ATCTCCGGCACGCGGCCGATCTATTTCAACGACACGCCGGGCTTCACCGCGATCGCGCAGGATTCGCTGATCGGCCATCT
CGTTCCGGCACTGCCGATTCCGAACGCGGTGCTGATCCTGTTCGTCGTCGCGGTCGGCGCGTCGATCGTGCTGAATCGCA
CGATCTTCGGCCGCTATACGTTCGCGCTCGGCAGCAACGAGGAAGCGCTGCGGCTGTCCGGCGTGAACGTCGACGCGTGG
AAGATCGCCGTCTATACGTTCAGCGGCGCGGTATGCGGGATCGCGGGCCTGCTGATCGCGTCGCGCCTGAACTCGGCGCA
GCCGGCGCTTGGGCAGGGCTACGAGCTCGACGCGATCGCGGCGGTCGTGATCGGCGGCACGTCGCTGTCGGGCGGCGCGG
GCAGCATCGTCGGCACGATCATCGGCGCGTTCATCATGAGCGTGCTGACCAACGGGCTGCGCATCATGTCGGTCGCGCAG
GAATGGCAGACCGTCGTGACGGGCGTGATCATCATCCTCGCCGTCTACGTCGACATCCTGCGCCGGCGACGCCGCTGA

Upstream 100 bases:

>100_bases
CGAGCTGAGCGCCGCCGACGCGACGCAGGAAAAGATCATGCAGCTCGCGACGCAGCGCGAGTCGACCGTTTTGTCGTGAG
TCAGCCGTTCAGGGTCCGTC

Downstream 100 bases:

>100_bases
CGCACGCAGGCTGCGCTTCACCGCCGGCCGGGCCGGCATTCCAGCGGATATAACCAAGGAGACGCGAAGTGATCAGGAGC
AAGGTGTTGAACGCGATCGT

Product: simple sugar transport system permease protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSNDTHPVPPLASGDAPAAASGLRARLFNPATRQRLLAFASLVLLIVFFGAASPNFLEVDNLVAILQATAVNGVLAVACT
YVIITSGIDLSVGTLMTFCAVMAGVVLTNWGMPLPLGIAAALGFGALSGCVSGFVIAKMKVPPFIATLGMMMLLKGLSLV
ISGTRPIYFNDTPGFTAIAQDSLIGHLVPALPIPNAVLILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAW
KIAVYTFSGAVCGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTNGLRIMSVAQ
EWQTVVTGVIIILAVYVDILRRRRR

Sequences:

>Translated_345_residues
MSNDTHPVPPLASGDAPAAASGLRARLFNPATRQRLLAFASLVLLIVFFGAASPNFLEVDNLVAILQATAVNGVLAVACT
YVIITSGIDLSVGTLMTFCAVMAGVVLTNWGMPLPLGIAAALGFGALSGCVSGFVIAKMKVPPFIATLGMMMLLKGLSLV
ISGTRPIYFNDTPGFTAIAQDSLIGHLVPALPIPNAVLILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAW
KIAVYTFSGAVCGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTNGLRIMSVAQ
EWQTVVTGVIIILAVYVDILRRRRR
>Mature_344_residues
SNDTHPVPPLASGDAPAAASGLRARLFNPATRQRLLAFASLVLLIVFFGAASPNFLEVDNLVAILQATAVNGVLAVACTY
VIITSGIDLSVGTLMTFCAVMAGVVLTNWGMPLPLGIAAALGFGALSGCVSGFVIAKMKVPPFIATLGMMMLLKGLSLVI
SGTRPIYFNDTPGFTAIAQDSLIGHLVPALPIPNAVLILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAWK
IAVYTFSGAVCGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTIIGAFIMSVLTNGLRIMSVAQE
WQTVVTGVIIILAVYVDILRRRRR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=317, Percent_Identity=43.5331230283912, Blast_Score=218, Evalue=6e-58,
Organism=Escherichia coli, GI1789992, Length=366, Percent_Identity=34.9726775956284, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1788896, Length=301, Percent_Identity=35.2159468438538, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI145693152, Length=310, Percent_Identity=35.8064516129032, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1790524, Length=333, Percent_Identity=30.3303303303303, Blast_Score=131, Evalue=7e-32,
Organism=Escherichia coli, GI87082395, Length=293, Percent_Identity=32.0819112627986, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788471, Length=343, Percent_Identity=35.2769679300292, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787794, Length=302, Percent_Identity=32.4503311258278, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1787793, Length=285, Percent_Identity=30.5263157894737, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI145693214, Length=253, Percent_Identity=32.4110671936759, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35658; Mature: 35527

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDTHPVPPLASGDAPAAASGLRARLFNPATRQRLLAFASLVLLIVFFGAASPNFLEVD
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHH
NLVAILQATAVNGVLAVACTYVIITSGIDLSVGTLMTFCAVMAGVVLTNWGMPLPLGIAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ALGFGALSGCVSGFVIAKMKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQ
HHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCHHHHH
DSLIGHLVPALPIPNAVLILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAW
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCCE
KIAVYTFSGAVCGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTI
EEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCHHHHHHH
IGAFIMSVLTNGLRIMSVAQEWQTVVTGVIIILAVYVDILRRRRR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNDTHPVPPLASGDAPAAASGLRARLFNPATRQRLLAFASLVLLIVFFGAASPNFLEVD
CCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHH
NLVAILQATAVNGVLAVACTYVIITSGIDLSVGTLMTFCAVMAGVVLTNWGMPLPLGIAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ALGFGALSGCVSGFVIAKMKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQ
HHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCHHHHH
DSLIGHLVPALPIPNAVLILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAW
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCCE
KIAVYTFSGAVCGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTI
EEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCHHHHHHH
IGAFIMSVLTNGLRIMSVAQEWQTVVTGVIIILAVYVDILRRRRR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]