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The map label for this gene is yddQ [H]

Identifier: 189353325

GI number: 189353325

Start: 1561622

End: 1562233

Strand: Reverse

Name: yddQ [H]

Synonym: BMULJ_04565

Alternate gene names: 189353325

Gene position: 1562233-1561622 (Counterclockwise)

Preceding gene: 189353326

Following gene: 189353323

Centisome position: 63.17

GC content: 67.48

Gene sequence:

>612_bases
ATGCAACATCCGACCATCCGTACCCTTGCCGGCGCAACGGCGCCGACGTCGATCGACGCTGCCCGCACCGCGCTGCTGGT
GATCGACTTCCAGAACGAATATTTCAGCGGACGCCTGCCGATTCCCGAAGGCTCGCGCGCGCTCGCGAACGCGCAGCGCG
TGATCGCATTCGCCGATCGGGCCGGGATGCCGGTCTTTCACGTGCAGCACGTCGGTGCCGCGGACGGCCCGCTCTTCGCG
GACGGCAGCGACGGTTTCCGCTTCCATGCCGACCTGCAGCCGGCGCCGCATCATGCGGTCGTGAAGAAGACCTCGGTCAG
CGTGTTTCCGACGACCGACATCGACGCGCGTCTGAAGGCCGCGGGCATCGATACGCTGATCGTCACCGGACTGATGACGC
ACGCATGCGTTGCCGGTGCGACGCGCGATGCAGTGCCGCTCGGCTATTCGGCGATCGTCGTCGAAGATGCGTGCGCGACG
CGCGACCTCGACATGGCCGACGGCGGTACCGTCGCGCACCGCGACCTACATCGCGCGACGCTCGCTGCGCTGTCCGATAC
GTTCGCCGACGTGCTGACGACCGAGCAACTGCTCGCGCTCCGCGTGGCTTGA

Upstream 100 bases:

>100_bases
GCGCGCTTGTTCCCGGTGTGAACGGCTCGCCGGCCGCGCCTGGCGGCGCCGGCAGCGCCGGGCCGCCGCTCCGTACGATG
TGCCAACCGAGAGAACGACC

Downstream 100 bases:

>100_bases
GAACAGCGGCGGCCGATTCGACCGCCGCGGCGGCGTCAGGGCGTCACGGGCGATGCGCGTATCCCTAGGCCCGTGTGCGA
CACCACCATCCAGCCCAAGC

Product: cysteine hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MQHPTIRTLAGATAPTSIDAARTALLVIDFQNEYFSGRLPIPEGSRALANAQRVIAFADRAGMPVFHVQHVGAADGPLFA
DGSDGFRFHADLQPAPHHAVVKKTSVSVFPTTDIDARLKAAGIDTLIVTGLMTHACVAGATRDAVPLGYSAIVVEDACAT
RDLDMADGGTVAHRDLHRATLAALSDTFADVLTTEQLLALRVA

Sequences:

>Translated_203_residues
MQHPTIRTLAGATAPTSIDAARTALLVIDFQNEYFSGRLPIPEGSRALANAQRVIAFADRAGMPVFHVQHVGAADGPLFA
DGSDGFRFHADLQPAPHHAVVKKTSVSVFPTTDIDARLKAAGIDTLIVTGLMTHACVAGATRDAVPLGYSAIVVEDACAT
RDLDMADGGTVAHRDLHRATLAALSDTFADVLTTEQLLALRVA
>Mature_203_residues
MQHPTIRTLAGATAPTSIDAARTALLVIDFQNEYFSGRLPIPEGSRALANAQRVIAFADRAGMPVFHVQHVGAADGPLFA
DGSDGFRFHADLQPAPHHAVVKKTSVSVFPTTDIDARLKAAGIDTLIVTGLMTHACVAGATRDAVPLGYSAIVVEDACAT
RDLDMADGGTVAHRDLHRATLAALSDTFADVLTTEQLLALRVA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081820, Length=187, Percent_Identity=28.3422459893048, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 21333; Mature: 21333

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHPTIRTLAGATAPTSIDAARTALLVIDFQNEYFSGRLPIPEGSRALANAQRVIAFADR
CCCCCCHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHEEEECCC
AGMPVFHVQHVGAADGPLFADGSDGFRFHADLQPAPHHAVVKKTSVSVFPTTDIDARLKA
CCCCEEEEEECCCCCCCEEECCCCCEEEEEECCCCCCCEEEEECEEEEEECCCCCCCHHH
AGIDTLIVTGLMTHACVAGATRDAVPLGYSAIVVEDACATRDLDMADGGTVAHRDLHRAT
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
LAALSDTFADVLTTEQLLALRVA
HHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MQHPTIRTLAGATAPTSIDAARTALLVIDFQNEYFSGRLPIPEGSRALANAQRVIAFADR
CCCCCCHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHEEEECCC
AGMPVFHVQHVGAADGPLFADGSDGFRFHADLQPAPHHAVVKKTSVSVFPTTDIDARLKA
CCCCEEEEEECCCCCCCEEECCCCCEEEEEECCCCCCCEEEEECEEEEEECCCCCCCHHH
AGIDTLIVTGLMTHACVAGATRDAVPLGYSAIVVEDACATRDLDMADGGTVAHRDLHRAT
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
LAALSDTFADVLTTEQLLALRVA
HHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]