BacMap

Definition	Burkholderia multivorans ATCC 17616 chromosome 2, complete genome.
Accession	NC_010805
Length	2,473,162

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The map label for this gene is yceI [H]

Identifier: 189353267

GI number: 189353267

Start: 1504507

End: 1505907

Strand: Reverse

Name: yceI [H]

Synonym: BMULJ_04507

Alternate gene names: 189353267

Gene position: 1505907-1504507 (Counterclockwise)

Preceding gene: 189353268

Following gene: 189353266

Centisome position: 60.89

GC content: 67.52

Gene sequence:

>1401_bases
ATGAGCACTTTCGACAACGTCGTGGCCGGTCGGGCCACGATGGAAGCTGCCGCCTCCACGCCCGGCGCGATCATCGCGCG
GCTCGAGCGGCTTCCGGCCAATGCGATGCAGATCCGCGCGCGCGTGCTGATCGGCACCGCGACGTTCTTCGACGGCTTCG
ACGTGATCACGATCGCGGCGACGCTGCCGCTGCTGATTCACAAGTGGGGCTTGTCGCCGACGCAGATCGGCATGCTGATC
GCATCGGGCGCGATCGGTCAGCTGATCGGCGCGTTCCTGTTTCCCGCACTCGCGGAAAAGCACGGCCGCGTGAAGGCGAT
CGCATGGAGCTCGGCCGTGATCGGCATCACGAGCATCGCCTGCGGCTTCGCGCCGACGTTCGAGGTATTCGTGCTGCTGC
GGATCCTGCAAGGGCTCGGGCTCGGCGGCGAATTGCCGGTCGCCGCGACCTACATCAACGAGATCACGCGCGCGCATGGC
CGCGGCCGTTTCGTGCTGCTGTATGAGATCGTGTTCCCGATCGGCCTGCTCGTGTCGATGGCGCTCGGCGCGTGGCTCGT
GCCGCGCTTCGGCTGGGAGATCATGTACTTCGTCGGCGGGTTGCCGCTGCTGCTCGCGCTCGTGCTCACGCACGTCGTGC
CCGAATCGCCGCGCTGGCTCGCGTCGCGCGGGCGGCTGGCCGAGGCCGGCCGCGCGGTGAGCGCGTTCGAGACCTCGGTG
CGCGGCGAGCTGCCGCCCGTCACGCAGACGGCCGCGTTCGACGAAATGGTGCGCCAGCATCCGAAGCGCCGGATGCTCGA
CCTGTTCAGCCGCGCGTACCGCAAGCGCACGCTCGCGATCGCGACGCTGTGGGCGACCTGCGGGTTCATCCAGTACGGGC
TGTCGACGTGGCTGCCGACGATCTACAAGAACTTCTATCATGCGCCGCTGCAGCTCGCGCTGAACCTGGCGGTGATCGGC
TCGGTGATGGGCGTGCTCGGTTCGCTGGCCTCCGCGCTGCTCGTCGACAAGCTCGGCCGCAAGCCGGTGATCGTCTGGTC
GTTCGTGCTGTGCGCACTGTCGCTGGCGCTCGCGGGCATCTATCACGCATCGTCGGTGTACGTCGTCGCGACGTTCTGCT
CGCTGTCGCTCGGTCTGATGGCGTCGGGCTTCATTACCGCGTACGTCTATACGCCGGAGCAGTATCCGACGAGCATCCGC
GCGTCGGGCTGCGGGCTCGGCAGCGCGTGGCTGAAGATCGCATCGTTCGCGGCGCCGATGATCGTCCCGCACGCGATCAT
CGGCGGCGATCTGAGCCCGGCGTTCTATCTGCTCGGTGCGGTGCCGCTGATTGCGGCCGTCACCGTGTACTTCGTCGGGA
TCGAGACGAAGGGCAAGGTGCTCGAAGCGCTCGAGGCGTAA

Upstream 100 bases:

>100_bases
ATGAACCAGGGCCGGGCAGTGGATAGGGAAGCCCTGGCAGACACGACCAAGGCGCTTGCCTGAGCGGCCAGACCCACACG
AGTTCCAGGAGACACCCCGC

Downstream 100 bases:

>100_bases
ATGACACGGTTTGTCGGCGTACGCGGCGTGCGAAGCTCGGACGGTGTCCGGGCTTTGTTACGCCGGTTGAGGCGGCTTCT
ATCGATGCGTTTTGCTAGAT

Product: permease of the major facilitator superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MSTFDNVVAGRATMEAAASTPGAIIARLERLPANAMQIRARVLIGTATFFDGFDVITIAATLPLLIHKWGLSPTQIGMLI
ASGAIGQLIGAFLFPALAEKHGRVKAIAWSSAVIGITSIACGFAPTFEVFVLLRILQGLGLGGELPVAATYINEITRAHG
RGRFVLLYEIVFPIGLLVSMALGAWLVPRFGWEIMYFVGGLPLLLALVLTHVVPESPRWLASRGRLAEAGRAVSAFETSV
RGELPPVTQTAAFDEMVRQHPKRRMLDLFSRAYRKRTLAIATLWATCGFIQYGLSTWLPTIYKNFYHAPLQLALNLAVIG
SVMGVLGSLASALLVDKLGRKPVIVWSFVLCALSLALAGIYHASSVYVVATFCSLSLGLMASGFITAYVYTPEQYPTSIR
ASGCGLGSAWLKIASFAAPMIVPHAIIGGDLSPAFYLLGAVPLIAAVTVYFVGIETKGKVLEALEA

Sequences:

>Translated_466_residues
MSTFDNVVAGRATMEAAASTPGAIIARLERLPANAMQIRARVLIGTATFFDGFDVITIAATLPLLIHKWGLSPTQIGMLI
ASGAIGQLIGAFLFPALAEKHGRVKAIAWSSAVIGITSIACGFAPTFEVFVLLRILQGLGLGGELPVAATYINEITRAHG
RGRFVLLYEIVFPIGLLVSMALGAWLVPRFGWEIMYFVGGLPLLLALVLTHVVPESPRWLASRGRLAEAGRAVSAFETSV
RGELPPVTQTAAFDEMVRQHPKRRMLDLFSRAYRKRTLAIATLWATCGFIQYGLSTWLPTIYKNFYHAPLQLALNLAVIG
SVMGVLGSLASALLVDKLGRKPVIVWSFVLCALSLALAGIYHASSVYVVATFCSLSLGLMASGFITAYVYTPEQYPTSIR
ASGCGLGSAWLKIASFAAPMIVPHAIIGGDLSPAFYLLGAVPLIAAVTVYFVGIETKGKVLEALEA
>Mature_465_residues
STFDNVVAGRATMEAAASTPGAIIARLERLPANAMQIRARVLIGTATFFDGFDVITIAATLPLLIHKWGLSPTQIGMLIA
SGAIGQLIGAFLFPALAEKHGRVKAIAWSSAVIGITSIACGFAPTFEVFVLLRILQGLGLGGELPVAATYINEITRAHGR
GRFVLLYEIVFPIGLLVSMALGAWLVPRFGWEIMYFVGGLPLLLALVLTHVVPESPRWLASRGRLAEAGRAVSAFETSVR
GELPPVTQTAAFDEMVRQHPKRRMLDLFSRAYRKRTLAIATLWATCGFIQYGLSTWLPTIYKNFYHAPLQLALNLAVIGS
VMGVLGSLASALLVDKLGRKPVIVWSFVLCALSLALAGIYHASSVYVVATFCSLSLGLMASGFITAYVYTPEQYPTSIRA
SGCGLGSAWLKIASFAAPMIVPHAIIGGDLSPAFYLLGAVPLIAAVTVYFVGIETKGKVLEALEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI24308167, Length=454, Percent_Identity=25.9911894273128, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI213021148, Length=458, Percent_Identity=23.1441048034935, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI7662270, Length=328, Percent_Identity=24.6951219512195, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI24497476, Length=397, Percent_Identity=25.4408060453401, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI20070188, Length=397, Percent_Identity=25.4408060453401, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI166064021, Length=382, Percent_Identity=26.9633507853403, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI166197673, Length=349, Percent_Identity=28.9398280802292, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI4506999, Length=346, Percent_Identity=26.3005780346821, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI262399383, Length=286, Percent_Identity=24.1258741258741, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI216548223, Length=304, Percent_Identity=24.3421052631579, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI73695465, Length=269, Percent_Identity=24.5353159851301, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI11415038, Length=381, Percent_Identity=26.246719160105, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI23510410, Length=260, Percent_Identity=28.0769230769231, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI4507005, Length=385, Percent_Identity=25.1948051948052, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI24497478, Length=335, Percent_Identity=24.7761194029851, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI24497480, Length=335, Percent_Identity=24.7761194029851, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI302148518, Length=353, Percent_Identity=23.7960339943343, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI8923870, Length=408, Percent_Identity=22.3039215686275, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI31542327, Length=352, Percent_Identity=26.9886363636364, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI148664184, Length=383, Percent_Identity=23.4986945169713, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI24497490, Length=356, Percent_Identity=25, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI157426885, Length=343, Percent_Identity=25.0728862973761, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI296080734, Length=358, Percent_Identity=23.1843575418994, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI296080721, Length=358, Percent_Identity=23.1843575418994, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI296080719, Length=358, Percent_Identity=23.1843575418994, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI24497499, Length=358, Percent_Identity=23.1843575418994, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI21553331, Length=359, Percent_Identity=25.0696378830084, Blast_Score=66, Evalue=9e-11,
Organism=Homo sapiens, GI24497485, Length=400, Percent_Identity=25.75, Blast_Score=65, Evalue=1e-10,
Organism=Escherichia coli, GI1786229, Length=415, Percent_Identity=26.7469879518072, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1788068, Length=455, Percent_Identity=26.8131868131868, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1788074, Length=402, Percent_Identity=27.6119402985075, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI87082159, Length=400, Percent_Identity=27.25, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI87082231, Length=199, Percent_Identity=30.1507537688442, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1790463, Length=440, Percent_Identity=26.1363636363636, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1789207, Length=480, Percent_Identity=23.125, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI87082404, Length=433, Percent_Identity=23.3256351039261, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1789312, Length=431, Percent_Identity=22.737819025522, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081723, Length=377, Percent_Identity=25.9946949602122, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790550, Length=344, Percent_Identity=22.6744186046512, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI32564663, Length=453, Percent_Identity=24.7240618101545, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI71986689, Length=388, Percent_Identity=23.7113402061856, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193202825, Length=388, Percent_Identity=23.7113402061856, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17565978, Length=332, Percent_Identity=23.7951807228916, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25145172, Length=382, Percent_Identity=24.0837696335079, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71991859, Length=350, Percent_Identity=23.1428571428571, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17554160, Length=392, Percent_Identity=24.4897959183673, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71991854, Length=350, Percent_Identity=23.1428571428571, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71989525, Length=344, Percent_Identity=23.546511627907, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71989531, Length=344, Percent_Identity=23.546511627907, Blast_Score=69, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6320063, Length=492, Percent_Identity=24.390243902439, Blast_Score=85, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6319718, Length=386, Percent_Identity=23.8341968911917, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320745, Length=410, Percent_Identity=24.6341463414634, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320007, Length=468, Percent_Identity=22.4358974358974, Blast_Score=71, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6324417, Length=440, Percent_Identity=22.9545454545455, Blast_Score=67, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6321888, Length=407, Percent_Identity=21.8673218673219, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321884, Length=318, Percent_Identity=21.6981132075472, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321100, Length=379, Percent_Identity=25.065963060686, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19922616, Length=427, Percent_Identity=26.6978922716628, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24640198, Length=452, Percent_Identity=25.2212389380531, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24640196, Length=452, Percent_Identity=25.2212389380531, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24640200, Length=452, Percent_Identity=25.2212389380531, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI19922874, Length=436, Percent_Identity=22.2477064220184, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24649622, Length=355, Percent_Identity=23.0985915492958, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24649618, Length=376, Percent_Identity=25.2659574468085, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24649616, Length=359, Percent_Identity=25.3481894150418, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355657, Length=394, Percent_Identity=26.3959390862944, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24652795, Length=385, Percent_Identity=23.6363636363636, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24652793, Length=385, Percent_Identity=23.6363636363636, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24647365, Length=329, Percent_Identity=25.8358662613982, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161078338, Length=335, Percent_Identity=25.9701492537313, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221330907, Length=369, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28573097, Length=224, Percent_Identity=25, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357295, Length=284, Percent_Identity=25.7042253521127, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI221330801, Length=231, Percent_Identity=23.8095238095238, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI161078056, Length=284, Percent_Identity=25.7042253521127, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49782; Mature: 49650

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFDNVVAGRATMEAAASTPGAIIARLERLPANAMQIRARVLIGTATFFDGFDVITIAA
CCCHHHHHHCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHEEEHHHHCCCHHHHHHH
TLPLLIHKWGLSPTQIGMLIASGAIGQLIGAFLFPALAEKHGRVKAIAWSSAVIGITSIA
HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH
CGFAPTFEVFVLLRILQGLGLGGELPVAATYINEITRAHGRGRFVLLYEIVFPIGLLVSM
HCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
ALGAWLVPRFGWEIMYFVGGLPLLLALVLTHVVPESPRWLASRGRLAEAGRAVSAFETSV
HHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCHHHHHHHHH
RGELPPVTQTAAFDEMVRQHPKRRMLDLFSRAYRKRTLAIATLWATCGFIQYGLSTWLPT
CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYKNFYHAPLQLALNLAVIGSVMGVLGSLASALLVDKLGRKPVIVWSFVLCALSLALAGI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YHASSVYVVATFCSLSLGLMASGFITAYVYTPEQYPTSIRASGCGLGSAWLKIASFAAPM
HHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IVPHAIIGGDLSPAFYLLGAVPLIAAVTVYFVGIETKGKVLEALEA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCC
>Mature Secondary Structure 
STFDNVVAGRATMEAAASTPGAIIARLERLPANAMQIRARVLIGTATFFDGFDVITIAA
CCHHHHHHCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHEEEHHHHCCCHHHHHHH
TLPLLIHKWGLSPTQIGMLIASGAIGQLIGAFLFPALAEKHGRVKAIAWSSAVIGITSIA
HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH
CGFAPTFEVFVLLRILQGLGLGGELPVAATYINEITRAHGRGRFVLLYEIVFPIGLLVSM
HCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
ALGAWLVPRFGWEIMYFVGGLPLLLALVLTHVVPESPRWLASRGRLAEAGRAVSAFETSV
HHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCHHHHHHHHH
RGELPPVTQTAAFDEMVRQHPKRRMLDLFSRAYRKRTLAIATLWATCGFIQYGLSTWLPT
CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYKNFYHAPLQLALNLAVIGSVMGVLGSLASALLVDKLGRKPVIVWSFVLCALSLALAGI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YHASSVYVVATFCSLSLGLMASGFITAYVYTPEQYPTSIRASGCGLGSAWLKIASFAAPM
HHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
IVPHAIIGGDLSPAFYLLGAVPLIAAVTVYFVGIETKGKVLEALEA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377 [H]