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The map label for this gene is 189353067

Identifier: 189353067

GI number: 189353067

Start: 1239573

End: 1240829

Strand: Direct

Name: 189353067

Synonym: BMULJ_04301

Alternate gene names: NA

Gene position: 1239573-1240829 (Clockwise)

Preceding gene: 189353066

Following gene: 189353068

Centisome position: 50.12

GC content: 67.62

Gene sequence:

>1257_bases
ATGCATTCCAATCAGACCACCTCGCGCACGCGCACGCGTAGCTGCACGACCTCATCGACGCGTCGCGCGCGCCGCACCAA
CGGGATCGCCGGCGCGCTCGTCGCCGCCTGCACGGCCAGCATCGCACCGACCGCCGCACAAGCACAGAGCAGTGTCGCGC
TGTACGGGCTGATCGACACGTCGATCACCTATGCGAACAACCAGCGCACGCATGGCGCGGGCTCGCCCGGCAGTGGCAAT
GTCGCGATGACGAGCGGCGCACTGAATGCGGCGCGCTGGGGGCTGCGCGGCCGCGAGGACCTCGGCGGCGGGCTCGCGGC
CGTCTTCACGCTCGAGAACGGCTTCTCGGGCACGACCGGCGCGTTGTCGCAGAAAGGCGTCGACCTGTTCGGCCGGCAGG
CATGGATCGGCGTGCGCTCGAATACGGCCGGCACGCTGACGTTCGGCCGCCAGTACGACCTGATCCTCGACTTCGTGACG
CCGCTCGGCGCGTCGGGGCCCGGCTGGGGCGGCAATCTCGCCGTCCATCCGTACGACAACGACGATTCGAATCGCAACAT
ACGGATCAACCACGCGGTCAAGTACACGAGCCCGAGCTATCGCGGGCTCACGTTCGGCGCGATGTACGGATTCTCGAATA
CGGCCGGCGCGTTTTCGAACAATGCCGCGTGGAGCGCGGGGCTGTCGTATGCGAACGGTCCGCTGAAGCTCGGCGCCGGC
TATCTGAAGATCAGCCGCGACCGCCATGCGCCGAATCCGGATGGCGCGCTCAGCACGGTCGACGGCTCGGCGACGATCAC
GGGCGGCAACCAGCAGATCTGGGCGCTCGCCGCGCGCTATGCGTTCGGCCCGCACTCGGTCGGCGCCGCGTGGTCGCATT
CGGCCACCGACGGCGTGACCGGTGTGCTCCAAGGCAGCGGCATCGCGCCGCTGAAAGGCGAATCGCTCGTGTTCGACAAC
TTCTCCGTCGATGCGCGCTACTTCGCGACCGCCGCGTTCAGCGTATCGGCTGCTTACACCTACACGATGGGTCGTTTCGA
TACGCGCGCGGGCCAGACGCGCCCGAAGTGGAATCAGGTCGTCGCGCAGGCCGACTACGCGTTCTCGAAGCGCACCGACG
TCTATCTCGAAGGCGTGTATCAGCGCGTGAGCGGCGGCAACGGCAATCCCGCGTTCAACGCGACCGTCTGGACGCTGACG
CCGTCGGCGAACGGCAATCAAGTCGTCGTCGCGCTCGGGCTGCGGCACAAGTTCTGA

Upstream 100 bases:

>100_bases
AATCGCGCGTCGGGCGATCTTCAATAATGCGCGCTCGATCCGTCGGTCTGCCGCCGACGCGCCTGCCGGCTTCGCGCCGG
GCCAACGACAAGAACACACA

Downstream 100 bases:

>100_bases
GGCGCGCCGCGCACGCGCCGGGCCTCGTCATGCAACGTTCGTTCCCGAGCGCGTGCGGCAACGTACGATGCCTGCGTGCG
CATCCTTTCTCGTCCATCTT

Product: outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MHSNQTTSRTRTRSCTTSSTRRARRTNGIAGALVAACTASIAPTAAQAQSSVALYGLIDTSITYANNQRTHGAGSPGSGN
VAMTSGALNAARWGLRGREDLGGGLAAVFTLENGFSGTTGALSQKGVDLFGRQAWIGVRSNTAGTLTFGRQYDLILDFVT
PLGASGPGWGGNLAVHPYDNDDSNRNIRINHAVKYTSPSYRGLTFGAMYGFSNTAGAFSNNAAWSAGLSYANGPLKLGAG
YLKISRDRHAPNPDGALSTVDGSATITGGNQQIWALAARYAFGPHSVGAAWSHSATDGVTGVLQGSGIAPLKGESLVFDN
FSVDARYFATAAFSVSAAYTYTMGRFDTRAGQTRPKWNQVVAQADYAFSKRTDVYLEGVYQRVSGGNGNPAFNATVWTLT
PSANGNQVVVALGLRHKF

Sequences:

>Translated_418_residues
MHSNQTTSRTRTRSCTTSSTRRARRTNGIAGALVAACTASIAPTAAQAQSSVALYGLIDTSITYANNQRTHGAGSPGSGN
VAMTSGALNAARWGLRGREDLGGGLAAVFTLENGFSGTTGALSQKGVDLFGRQAWIGVRSNTAGTLTFGRQYDLILDFVT
PLGASGPGWGGNLAVHPYDNDDSNRNIRINHAVKYTSPSYRGLTFGAMYGFSNTAGAFSNNAAWSAGLSYANGPLKLGAG
YLKISRDRHAPNPDGALSTVDGSATITGGNQQIWALAARYAFGPHSVGAAWSHSATDGVTGVLQGSGIAPLKGESLVFDN
FSVDARYFATAAFSVSAAYTYTMGRFDTRAGQTRPKWNQVVAQADYAFSKRTDVYLEGVYQRVSGGNGNPAFNATVWTLT
PSANGNQVVVALGLRHKF
>Mature_418_residues
MHSNQTTSRTRTRSCTTSSTRRARRTNGIAGALVAACTASIAPTAAQAQSSVALYGLIDTSITYANNQRTHGAGSPGSGN
VAMTSGALNAARWGLRGREDLGGGLAAVFTLENGFSGTTGALSQKGVDLFGRQAWIGVRSNTAGTLTFGRQYDLILDFVT
PLGASGPGWGGNLAVHPYDNDDSNRNIRINHAVKYTSPSYRGLTFGAMYGFSNTAGAFSNNAAWSAGLSYANGPLKLGAG
YLKISRDRHAPNPDGALSTVDGSATITGGNQQIWALAARYAFGPHSVGAAWSHSATDGVTGVLQGSGIAPLKGESLVFDN
FSVDARYFATAAFSVSAAYTYTMGRFDTRAGQTRPKWNQVVAQADYAFSKRTDVYLEGVYQRVSGGNGNPAFNATVWTLT
PSANGNQVVVALGLRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 43741; Mature: 43741

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSNQTTSRTRTRSCTTSSTRRARRTNGIAGALVAACTASIAPTAAQAQSSVALYGLIDT
CCCCCCCCCHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEEC
SITYANNQRTHGAGSPGSGNVAMTSGALNAARWGLRGREDLGGGLAAVFTLENGFSGTTG
EEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCHHCCCCEEEEEEEECCCCCCCC
ALSQKGVDLFGRQAWIGVRSNTAGTLTFGRQYDLILDFVTPLGASGPGWGGNLAVHPYDN
CCCCCCHHHCCCEEEEEEECCCCEEEEECCCCEEHHEEHHHCCCCCCCCCCCEEEECCCC
DDSNRNIRINHAVKYTSPSYRGLTFGAMYGFSNTAGAFSNNAAWSAGLSYANGPLKLGAG
CCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
YLKISRDRHAPNPDGALSTVDGSATITGGNQQIWALAARYAFGPHSVGAAWSHSATDGVT
EEEEECCCCCCCCCCCEEEECCCEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCEE
GVLQGSGIAPLKGESLVFDNFSVDARYFATAAFSVSAAYTYTMGRFDTRAGQTRPKWNQV
EEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEEEEEECCEECCCCCCCCHHHHH
VAQADYAFSKRTDVYLEGVYQRVSGGNGNPAFNATVWTLTPSANGNQVVVALGLRHKF
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MHSNQTTSRTRTRSCTTSSTRRARRTNGIAGALVAACTASIAPTAAQAQSSVALYGLIDT
CCCCCCCCCHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEEC
SITYANNQRTHGAGSPGSGNVAMTSGALNAARWGLRGREDLGGGLAAVFTLENGFSGTTG
EEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCHHCCCCEEEEEEEECCCCCCCC
ALSQKGVDLFGRQAWIGVRSNTAGTLTFGRQYDLILDFVTPLGASGPGWGGNLAVHPYDN
CCCCCCHHHCCCEEEEEEECCCCEEEEECCCCEEHHEEHHHCCCCCCCCCCCEEEECCCC
DDSNRNIRINHAVKYTSPSYRGLTFGAMYGFSNTAGAFSNNAAWSAGLSYANGPLKLGAG
CCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
YLKISRDRHAPNPDGALSTVDGSATITGGNQQIWALAARYAFGPHSVGAAWSHSATDGVT
EEEEECCCCCCCCCCCEEEECCCEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCEE
GVLQGSGIAPLKGESLVFDNFSVDARYFATAAFSVSAAYTYTMGRFDTRAGQTRPKWNQV
EEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEEEEEECCEECCCCCCCCHHHHH
VAQADYAFSKRTDVYLEGVYQRVSGGNGNPAFNATVWTLTPSANGNQVVVALGLRHKF
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]