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The map label for this gene is pal [H]

Identifier: 189353068

GI number: 189353068

Start: 1241113

End: 1241604

Strand: Direct

Name: pal [H]

Synonym: BMULJ_04302

Alternate gene names: 189353068

Gene position: 1241113-1241604 (Clockwise)

Preceding gene: 189353067

Following gene: 189353069

Centisome position: 50.18

GC content: 66.46

Gene sequence:

>492_bases
ATGAGCAAAACGAATCGGTTTGCGGTCATTGCAGCGCTCGCGCTGCTCGGCGGCTGTCATCACGCCGCGAAGACGCCCGA
GAACACCGGGATGGCGCCGGCGCCGTCGAGCGAGGCCGTCACGACGGTGACGGCCGACGATCTCGACAATCCGAACAGCC
CGCTCGCCAAGCGCAGCGTGTATTTCGACTTCGACAGCTATACGGTGAAGCCCGAGGACCAGTCGCTGCTGCAGGCCCAT
GCGAACTACCTGCGCAGTCACCCGTCGCGTCACGTGCTGATCCAGGGCAACACCGACGAGCGCGGCACGTCCGAATACAA
CCTCGCGCTCGGCCAGCGCCGCTCGCAGGCCGTGATGAGCGCGCTCGAAACGCTCGGCGTGCCGGCGTCGCAGCTCGAGG
CCGTGAGTCTCGGCAAGGAAAAGCCGGTCGCGCTCGGTCACGACGAAGCCGCGTGGGCGCAAAACCGCCGCGCGGATCTC
GTCTATCGTTGA

Upstream 100 bases:

>100_bases
TCGTCACAGTCTTTCAGATCGCGTGTCGCCGGCTTGCGAAAGCATGTCGCGTGAGTGTCGCGCGCCCGCTGTCAACGCAG
TCAACCGCAGGAGAAAAAGG

Downstream 100 bases:

>100_bases
TCGCACCGCGTCTGCCGCCGCGTTCGCGCCGGCGTGGCGGCCCTTCCTGGCCGCCGCGCCGGGCACGACGCGACTACACA
CGCCGAATCGCCACGCGTCG

Product: peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSKTNRFAVIAALALLGGCHHAAKTPENTGMAPAPSSEAVTTVTADDLDNPNSPLAKRSVYFDFDSYTVKPEDQSLLQAH
ANYLRSHPSRHVLIQGNTDERGTSEYNLALGQRRSQAVMSALETLGVPASQLEAVSLGKEKPVALGHDEAAWAQNRRADL
VYR

Sequences:

>Translated_163_residues
MSKTNRFAVIAALALLGGCHHAAKTPENTGMAPAPSSEAVTTVTADDLDNPNSPLAKRSVYFDFDSYTVKPEDQSLLQAH
ANYLRSHPSRHVLIQGNTDERGTSEYNLALGQRRSQAVMSALETLGVPASQLEAVSLGKEKPVALGHDEAAWAQNRRADL
VYR
>Mature_162_residues
SKTNRFAVIAALALLGGCHHAAKTPENTGMAPAPSSEAVTTVTADDLDNPNSPLAKRSVYFDFDSYTVKPEDQSLLQAHA
NYLRSHPSRHVLIQGNTDERGTSEYNLALGQRRSQAVMSALETLGVPASQLEAVSLGKEKPVALGHDEAAWAQNRRADLV
YR

Specific function: Thought to play a role in bacterial envelope integrity. Very strongly associated with the peptidoglycan [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=103, Percent_Identity=56.3106796116505, Blast_Score=128, Evalue=2e-31,
Organism=Escherichia coli, GI48994946, Length=113, Percent_Identity=36.283185840708, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17613; Mature: 17482

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTNRFAVIAALALLGGCHHAAKTPENTGMAPAPSSEAVTTVTADDLDNPNSPLAKRSV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEE
YFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDERGTSEYNLALGQRRSQAVMS
EEECCCEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCHHHHHHHH
ALETLGVPASQLEAVSLGKEKPVALGHDEAAWAQNRRADLVYR
HHHHHCCCHHHHHHHHCCCCCCEEECCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKTNRFAVIAALALLGGCHHAAKTPENTGMAPAPSSEAVTTVTADDLDNPNSPLAKRSV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEE
YFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDERGTSEYNLALGQRRSQAVMS
EEECCCEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCHHHHHHHH
ALETLGVPASQLEAVSLGKEKPVALGHDEAAWAQNRRADLVYR
HHHHHCCCHHHHHHHHCCCCCCEEECCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]