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The map label for this gene is bkdR [H]

Identifier: 189353002

GI number: 189353002

Start: 1166515

End: 1166988

Strand: Reverse

Name: bkdR [H]

Synonym: BMULJ_04236

Alternate gene names: 189353002

Gene position: 1166988-1166515 (Counterclockwise)

Preceding gene: 189353007

Following gene: 189353000

Centisome position: 47.19

GC content: 63.5

Gene sequence:

>474_bases
ATGCCTGAACCGGTTCTCGATCGTATCGATCGCCACTTGCTCGCGATCCTGCAGGAGAACGGCCGCGCGTCGAATCTCGA
ACTGGCCAAGGCGGTCGGCCTGTCGCCCGCGCAGACGTTGCGGCGTCACCGGCGGCTCGAGGAGATCGGCGCGATCCGCC
GCTACGAGACGCGGCTGTGCCCCGATACGCTCGGCTTCGGCGTCACGGCGTTCGTGCACGTGACGATGGAGCGCGGGCAT
ATCCGCGACCTGTCGAAGTTCCAGAAGCTCGTGTCCGATCTCGCGCAGATCCAGGAGTGCTTCTCGGTGACGGGCGACAT
CGACTACGTGCTGAAGGTCGTCGCGCACGATCTGAAGGGACTGTCGAGATTTCTGCTCGAGACGCTGATGCGCATTCCCG
GTGTGAGCGGCGTGCATTCGAGCGTCTGTCTCGACGAAATCAAGTGCACGAGTGCGATGCCGGTCGAAGAGTGA

Upstream 100 bases:

>100_bases
GTTTAGCGTCGCGGTCGGGAAATCGGGTTTCGTAACCCGTTCATGCAAACCCTACATTATGAGATAAGATTGCATCCAGG
AGACAGATGAGGAAACAAAA

Downstream 100 bases:

>100_bases
CGGGCGCGCGGTCTTTCCGTTTGAGCGCGGGCCGCGGGCACCGCCGCGCCATTCCGCGCTATGCCGCGCGACTCAACGCA
CGGCCGCGAACGTACTGATC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPEPVLDRIDRHLLAILQENGRASNLELAKAVGLSPAQTLRRHRRLEEIGAIRRYETRLCPDTLGFGVTAFVHVTMERGH
IRDLSKFQKLVSDLAQIQECFSVTGDIDYVLKVVAHDLKGLSRFLLETLMRIPGVSGVHSSVCLDEIKCTSAMPVEE

Sequences:

>Translated_157_residues
MPEPVLDRIDRHLLAILQENGRASNLELAKAVGLSPAQTLRRHRRLEEIGAIRRYETRLCPDTLGFGVTAFVHVTMERGH
IRDLSKFQKLVSDLAQIQECFSVTGDIDYVLKVVAHDLKGLSRFLLETLMRIPGVSGVHSSVCLDEIKCTSAMPVEE
>Mature_156_residues
PEPVLDRIDRHLLAILQENGRASNLELAKAVGLSPAQTLRRHRRLEEIGAIRRYETRLCPDTLGFGVTAFVHVTMERGHI
RDLSKFQKLVSDLAQIQECFSVTGDIDYVLKVVAHDLKGLSRFLLETLMRIPGVSGVHSSVCLDEIKCTSAMPVEE

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=155, Percent_Identity=41.9354838709677, Blast_Score=122, Evalue=8e-30,
Organism=Escherichia coli, GI87081742, Length=152, Percent_Identity=32.2368421052632, Blast_Score=93, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17577; Mature: 17445

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPVLDRIDRHLLAILQENGRASNLELAKAVGLSPAQTLRRHRRLEEIGAIRRYETRLC
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDTLGFGVTAFVHVTMERGHIRDLSKFQKLVSDLAQIQECFSVTGDIDYVLKVVAHDLKG
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LSRFLLETLMRIPGVSGVHSSVCLDEIKCTSAMPVEE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PEPVLDRIDRHLLAILQENGRASNLELAKAVGLSPAQTLRRHRRLEEIGAIRRYETRLC
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDTLGFGVTAFVHVTMERGHIRDLSKFQKLVSDLAQIQECFSVTGDIDYVLKVVAHDLKG
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LSRFLLETLMRIPGVSGVHSSVCLDEIKCTSAMPVEE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]