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The map label for this gene is atoE [H]

Identifier: 189352993

GI number: 189352993

Start: 1155434

End: 1156756

Strand: Direct

Name: atoE [H]

Synonym: BMULJ_04227

Alternate gene names: 189352993

Gene position: 1155434-1156756 (Clockwise)

Preceding gene: 189352992

Following gene: 189352998

Centisome position: 46.72

GC content: 67.27

Gene sequence:

>1323_bases
TTGATTCAACGCATTGCCCGCTTCTTCACGCAGGTGGTTCACCGCGTGCTGCCCGACCCGTTGATTTTCGCGATCCTGCT
GACGATCGTCACGTTCGCGCTTGCGTTCGGCCTCACGCCGAACTCGCCGGTGCAACTGACGACGATGTGGGGTTCGGGTT
TCTGGAACCTGCTCGCTTTCTCGATGCAGATGGTGATGATTCTCGTCACGGGCCACGCGCTCGCGAGTTCGCCGCCCGTG
AAGCGGCTGCTCGTCGCGCTCGCGAGCGCCGCGCGCACGCCGGCGCAGGGCGTGATGCTCGTTGCCTTCGTCGGCGCGCT
CGCGTGCGCGATCAACTGGGGCTTCGGGCTCGTGCTCGGCGCGATGCTCGCGCGCGAAGTCGCACGTCGTGTTGCCGGCA
GCGACTATCGGCTGCTCGTCGCGTCGGCCTACATGGGCTTTCTGAGCTGGCACGGCGGCCTGTCGGGCTCGGTGCCGCTC
GTCGCCGCGACGAAAGGCAATCCGATGGAAAAGACGATCGGCCTGATCCCCGTGTCGCAGACGATCTTCACGGGCTACAA
CGCGTTCATCACGATCGGGTTGATCGTGATGCTGCCGTTTCTCGCGCGGATGATGATGCCGAAACCGGGCGATGTCGTCA
GCGTCGATCCGGCGCTGCTCGCCGAGCCGCCGAGCGTCGAGCGCGTGCTCGGGCCCGATGCGACGCTCGCGGAGCGCCTC
GAGGAGAGCCGCGCGCTGTCGGTGTTCGTCGCTGCACTGTGCGCGGCGTTTCTCGTGCTGCGGTTCGTGCAGAAGGGCTT
CGCACTCGACATCGATACGGTGAACCTCGCGTTCCTCGCCGCCGGCATCCTGCTGCACCGCACGCCGATGGCCTACGCGC
GTGCCGTGGCCGGCGCCGCGCGCGGGGCGTCGGGGATCATGATCCAGTTCCCGTTCTACGCGGGCATCCAGGCGCTGATG
GACCATTCGGGCCTCGCGGGCGTGATCACGAAGTGGTTCGTCGACATCGCGAACGTGCACACGTTTCCGCTGCTCGCGTT
CCTGAGCTCGGCGGTGATCAACTTCGCGGTGCCGTCGGGCGGCGGTCACTGGGTCGTGCAGGGGCCGTTCGTGATGCCGG
CCGCGCAGGCGCTCGGCGCCGATCTCGGCAAGGCCGCGATGGCGATCGCGTACGGCGAGGCGTGGACGAACATGGCGCAG
CCGTTCTGGGCCTTGCCCGCGCTCGCGATCGCGGGGCTCGGCGTGCGCGACATCATGGGCTACTGCGTGACGACGCTGCT
GTTTTCGGGTGTCGTGTTCGTCGCGGGGATGTATCTGTTCTGA

Upstream 100 bases:

>100_bases
CGAAGCGCATCGCGCGGTTCTGTGCAAGAATCCGCGCGACCCGCGCTTTCCCATAACCACATGCGCGCGGACGTCCCTAT
CAGGAAACGAGGAGTACAAG

Downstream 100 bases:

>100_bases
GCGCGTTCCGAACGGCCGGTGCGCGCGGGCGAGCGTCGGCTCTCGCGCGCGCCGGCCCGAGCTGCACCCGTCATGCGGCA
GAACGCGCGCGCTGCCGTTC

Product: short-chain fatty acids transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MIQRIARFFTQVVHRVLPDPLIFAILLTIVTFALAFGLTPNSPVQLTTMWGSGFWNLLAFSMQMVMILVTGHALASSPPV
KRLLVALASAARTPAQGVMLVAFVGALACAINWGFGLVLGAMLAREVARRVAGSDYRLLVASAYMGFLSWHGGLSGSVPL
VAATKGNPMEKTIGLIPVSQTIFTGYNAFITIGLIVMLPFLARMMMPKPGDVVSVDPALLAEPPSVERVLGPDATLAERL
EESRALSVFVAALCAAFLVLRFVQKGFALDIDTVNLAFLAAGILLHRTPMAYARAVAGAARGASGIMIQFPFYAGIQALM
DHSGLAGVITKWFVDIANVHTFPLLAFLSSAVINFAVPSGGGHWVVQGPFVMPAAQALGADLGKAAMAIAYGEAWTNMAQ
PFWALPALAIAGLGVRDIMGYCVTTLLFSGVVFVAGMYLF

Sequences:

>Translated_440_residues
MIQRIARFFTQVVHRVLPDPLIFAILLTIVTFALAFGLTPNSPVQLTTMWGSGFWNLLAFSMQMVMILVTGHALASSPPV
KRLLVALASAARTPAQGVMLVAFVGALACAINWGFGLVLGAMLAREVARRVAGSDYRLLVASAYMGFLSWHGGLSGSVPL
VAATKGNPMEKTIGLIPVSQTIFTGYNAFITIGLIVMLPFLARMMMPKPGDVVSVDPALLAEPPSVERVLGPDATLAERL
EESRALSVFVAALCAAFLVLRFVQKGFALDIDTVNLAFLAAGILLHRTPMAYARAVAGAARGASGIMIQFPFYAGIQALM
DHSGLAGVITKWFVDIANVHTFPLLAFLSSAVINFAVPSGGGHWVVQGPFVMPAAQALGADLGKAAMAIAYGEAWTNMAQ
PFWALPALAIAGLGVRDIMGYCVTTLLFSGVVFVAGMYLF
>Mature_440_residues
MIQRIARFFTQVVHRVLPDPLIFAILLTIVTFALAFGLTPNSPVQLTTMWGSGFWNLLAFSMQMVMILVTGHALASSPPV
KRLLVALASAARTPAQGVMLVAFVGALACAINWGFGLVLGAMLAREVARRVAGSDYRLLVASAYMGFLSWHGGLSGSVPL
VAATKGNPMEKTIGLIPVSQTIFTGYNAFITIGLIVMLPFLARMMMPKPGDVVSVDPALLAEPPSVERVLGPDATLAERL
EESRALSVFVAALCAAFLVLRFVQKGFALDIDTVNLAFLAAGILLHRTPMAYARAVAGAARGASGIMIQFPFYAGIQALM
DHSGLAGVITKWFVDIANVHTFPLLAFLSSAVINFAVPSGGGHWVVQGPFVMPAAQALGADLGKAAMAIAYGEAWTNMAQ
PFWALPALAIAGLGVRDIMGYCVTTLLFSGVVFVAGMYLF

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=440, Percent_Identity=67.0454545454545, Blast_Score=617, Evalue=1e-178,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 46562; Mature: 46562

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRIARFFTQVVHRVLPDPLIFAILLTIVTFALAFGLTPNSPVQLTTMWGSGFWNLLAF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH
SMQMVMILVTGHALASSPPVKRLLVALASAARTPAQGVMLVAFVGALACAINWGFGLVLG
HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
AMLAREVARRVAGSDYRLLVASAYMGFLSWHGGLSGSVPLVAATKGNPMEKTIGLIPVSQ
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHCCEECHH
TIFTGYNAFITIGLIVMLPFLARMMMPKPGDVVSVDPALLAEPPSVERVLGPDATLAERL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCHHHCCCCHHHHHHH
EESRALSVFVAALCAAFLVLRFVQKGFALDIDTVNLAFLAAGILLHRTPMAYARAVAGAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RGASGIMIQFPFYAGIQALMDHSGLAGVITKWFVDIANVHTFPLLAFLSSAVINFAVPSG
CCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
GGHWVVQGPFVMPAAQALGADLGKAAMAIAYGEAWTNMAQPFWALPALAIAGLGVRDIMG
CCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHH
YCVTTLLFSGVVFVAGMYLF
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQRIARFFTQVVHRVLPDPLIFAILLTIVTFALAFGLTPNSPVQLTTMWGSGFWNLLAF
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH
SMQMVMILVTGHALASSPPVKRLLVALASAARTPAQGVMLVAFVGALACAINWGFGLVLG
HHHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
AMLAREVARRVAGSDYRLLVASAYMGFLSWHGGLSGSVPLVAATKGNPMEKTIGLIPVSQ
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHCCEECHH
TIFTGYNAFITIGLIVMLPFLARMMMPKPGDVVSVDPALLAEPPSVERVLGPDATLAERL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCHHHCCCCHHHHHHH
EESRALSVFVAALCAAFLVLRFVQKGFALDIDTVNLAFLAAGILLHRTPMAYARAVAGAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RGASGIMIQFPFYAGIQALMDHSGLAGVITKWFVDIANVHTFPLLAFLSSAVINFAVPSG
CCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
GGHWVVQGPFVMPAAQALGADLGKAAMAIAYGEAWTNMAQPFWALPALAIAGLGVRDIMG
CCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHH
YCVTTLLFSGVVFVAGMYLF
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]