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The map label for this gene is ydiK [H]

Identifier: 189352951

GI number: 189352951

Start: 1107111

End: 1108181

Strand: Direct

Name: ydiK [H]

Synonym: BMULJ_04185

Alternate gene names: 189352951

Gene position: 1107111-1108181 (Clockwise)

Preceding gene: 189352950

Following gene: 189352952

Centisome position: 44.77

GC content: 69.65

Gene sequence:

>1071_bases
ATGGGCACTCACGTTTCGTCGTCCCGCGACGCGGCCGCGCGGCCGCGCGCGCAACTGATCGCGCGCGCCGTGCTCTATGC
GGCGCTTCTCGCGCTTGCGCTGTGGGTGATCCGCGCATTCATTCCCGCGATCGCCTGGGCCTGCGTGATCGCGATCGCGA
TGTGGCCGCTGCTGCAGCGGATCGAGGCGAATGCGCTGCTGCGCAACCGGCCGACGCTGGTCGCGACGATCGTCACGGCG
GCCGTGTCGCTGCTGGTCGTGCTGCCGGTCGCGATGGCGCTCACGCAGGCGATCGTGCAGGCGCACGACCTGCGCGAATG
GTTCCAGTCGATCCGCGACAACGGCATTCCGCTGCCCGACGTCGTGAACCGGCTGCCGTACGGCGCGGCGCAGATCACGC
AATGGTGGCAAACCAACCTCGGTCATCCGCTGCATGCGGCCACCGCGATGCACGGCGCGAGCGGCGAAAAGGTGCTCGCG
TTCGGGCGGCAGTTCGGCACGCGCGTCGCACATGCGGTATTCGAATTCGGCTTCATGCTCGTCACGCTGTTTGTCATCGT
GCGCGCCGGACACCGGCTGGCCGGCGAACTGCTGCAGGGCGCGCAGCGTGCGTTCGGCCACGACGGCGCGCATCTGATCG
AGCGCATGGTCGCCGCGGTGCAGGGCACGGTCACGGGGCTCGTCGTCGTGGGGCTCGGCGAAGGCGCGCTGCTCGGCGTT
GCCTATGCGCTCGCCGGCGTCCCGCATGCGGCGCTGCTCGGCGTCGTCACCGCGGTTGCCGCGATGCTGCCGTTCTGCGC
GCCGCTCGTGTTCTGCGGCGCCGCGCTGTGGCTGTTCGTGCAGGGCGCGACCGTGTGGGCGATCGTGATCGCCGTACTCG
GCTTCGTCGTCGTGTTCGTTGCCGAACACTTCGTGCGGCCGGTGCTGATCGGCAACTCCGCACGGCTGCCGTTCCTGCTC
GTGCTGTTCGGCATTCTCGGCGGTGCGGAGACATTCGGCCTCATCGGCCTGTTCGTCGGCCCCGCGCTGATGACGGTGCT
GACCGTGCTGTGGGCCGAATGGCGCGCGTAA

Upstream 100 bases:

>100_bases
CGTCGCGCCGCGCCCATGCGCGGCTTCGATGGATAGAATGGCGGTTCGCGCAGTGAGGTTGCTGCGCGAACCGCCATTTT
TTTCTTTCGACAGAGGTGCG

Downstream 100 bases:

>100_bases
GCGTTGCATCCGGCACACGCCGCGCGCACCCAATTCGACATTTCTTTGCGATCCGAACCCCAAAGGTCGAGTAGCATGGG
GCTTTCGGTCGCGCCGGCAG

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MGTHVSSSRDAAARPRAQLIARAVLYAALLALALWVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTA
AVSLLVVLPVAMALTQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHPLHAATAMHGASGEKVLA
FGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGAHLIERMVAAVQGTVTGLVVVGLGEGALLGV
AYALAGVPHAALLGVVTAVAAMLPFCAPLVFCGAALWLFVQGATVWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLL
VLFGILGGAETFGLIGLFVGPALMTVLTVLWAEWRA

Sequences:

>Translated_356_residues
MGTHVSSSRDAAARPRAQLIARAVLYAALLALALWVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTA
AVSLLVVLPVAMALTQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHPLHAATAMHGASGEKVLA
FGRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGAHLIERMVAAVQGTVTGLVVVGLGEGALLGV
AYALAGVPHAALLGVVTAVAAMLPFCAPLVFCGAALWLFVQGATVWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLL
VLFGILGGAETFGLIGLFVGPALMTVLTVLWAEWRA
>Mature_355_residues
GTHVSSSRDAAARPRAQLIARAVLYAALLALALWVIRAFIPAIAWACVIAIAMWPLLQRIEANALLRNRPTLVATIVTAA
VSLLVVLPVAMALTQAIVQAHDLREWFQSIRDNGIPLPDVVNRLPYGAAQITQWWQTNLGHPLHAATAMHGASGEKVLAF
GRQFGTRVAHAVFEFGFMLVTLFVIVRAGHRLAGELLQGAQRAFGHDGAHLIERMVAAVQGTVTGLVVVGLGEGALLGVA
YALAGVPHAALLGVVTAVAAMLPFCAPLVFCGAALWLFVQGATVWAIVIAVLGFVVVFVAEHFVRPVLIGNSARLPFLLV
LFGILGGAETFGLIGLFVGPALMTVLTVLWAEWRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=356, Percent_Identity=28.0898876404494, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 37789; Mature: 37658

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTHVSSSRDAAARPRAQLIARAVLYAALLALALWVIRAFIPAIAWACVIAIAMWPLLQR
CCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEANALLRNRPTLVATIVTAAVSLLVVLPVAMALTQAIVQAHDLREWFQSIRDNGIPLPD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VVNRLPYGAAQITQWWQTNLGHPLHAATAMHGASGEKVLAFGRQFGTRVAHAVFEFGFML
HHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VTLFVIVRAGHRLAGELLQGAQRAFGHDGAHLIERMVAAVQGTVTGLVVVGLGEGALLGV
HHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHH
AYALAGVPHAALLGVVTAVAAMLPFCAPLVFCGAALWLFVQGATVWAIVIAVLGFVVVFV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEHFVRPVLIGNSARLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTVLWAEWRA
HHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GTHVSSSRDAAARPRAQLIARAVLYAALLALALWVIRAFIPAIAWACVIAIAMWPLLQR
CCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEANALLRNRPTLVATIVTAAVSLLVVLPVAMALTQAIVQAHDLREWFQSIRDNGIPLPD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VVNRLPYGAAQITQWWQTNLGHPLHAATAMHGASGEKVLAFGRQFGTRVAHAVFEFGFML
HHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VTLFVIVRAGHRLAGELLQGAQRAFGHDGAHLIERMVAAVQGTVTGLVVVGLGEGALLGV
HHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHH
AYALAGVPHAALLGVVTAVAAMLPFCAPLVFCGAALWLFVQGATVWAIVIAVLGFVVVFV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEHFVRPVLIGNSARLPFLLVLFGILGGAETFGLIGLFVGPALMTVLTVLWAEWRA
HHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]