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The map label for this gene is yjiR [H]

Identifier: 189352839

GI number: 189352839

Start: 962114

End: 963559

Strand: Direct

Name: yjiR [H]

Synonym: BMULJ_04073

Alternate gene names: 189352839

Gene position: 962114-963559 (Clockwise)

Preceding gene: 189352837

Following gene: 189352843

Centisome position: 38.9

GC content: 69.85

Gene sequence:

>1446_bases
ATGGACGGCGAGCCGTTGTACGAACGGCTCGCCGAGCATTACCGCCGCATCATCGCGGCCGGCACGCTGTCGCCCGGCGA
CCGGATGCCGTCCGTGCGCACGTTCATGGCGCAGCACGGCGTGAGCCTGTCGACGGCGATCCAGACCTTCCGGCGGCTCG
AGGATTCGGGCTGGTGCGAGGCAAGGCCGCGGTCCGGGTATTTCGTGCGCCGCCGCGCATCGCCGGTGCTCGACGCGCTG
CCGGAAGGCGATGCGGCGCCGCTCGCCATCGCGCCGCCGTTCGCGGGGCTGCACGAACGCGTGTCGCGCGTGATCGACCG
CGGCCACACGGCGACCGATGCGTTGAACCTCGGCGGCGCGTCCGCCGCCGCGTCGCTGTATCCGACCGAACGTCTGCAGG
CGCTCGCGATCCGCCTGCTGCGGCGCAAGCCGACGCTGCTGACCGACGCGGGACGCATCGACGCCCTGCCGGAGTTCCGC
CACGCGATGGCGAAGCGCGCGCTGTCGTACGGCGTGACGGTATCGCCGGACGACGTGATGTCGACGAGCGGTGGCGTCGA
CGCAGTCAATCTCGCGCTGCGCGCGGTCGCGCAGCCGGGCGACACGATCGCGATCGAATCGCCGGCGTTCTTCGGGCTGC
TTCAACTGCTCGAAAGCCTCGGGATGCGCGCGCTCGAAATTCCGGCGAGCCCGACGACGGGGCTCTCGATCGAAGCGCTC
GAAGTCGCGCTGAACGCCTATCCGGACATTCGCGCCGTCGTGGTCGTGCCGAACCTGCAGAACCCGCTCGGCAGCGTGAT
GCCCGACGAGCGCAAGGCGGCGCTCGTCGCGCTGTGCGCGAGCCGCGGGGTGGCCGTGATCGAGGACGAGCCGTACCGCG
AACTCGTGGACGCGCCGCACACGGTGAAGCCCGTGAAGGCATGGGACCGAGACGGCACCGTCATCTATTGCCCGTCGTTC
AACAAGGTACTCGCGCCGGGGATGCGCCTCGGCTGGATAAGCGGCGGGCGTTGGCATGCGCGCGTGAAGATGCTGAAGTT
CGCGCACAGCCGGCACAACGCGGCGCTGCTCCAGGCGGTGGCGGCCGAATTCGTCGGTTCGGGCGCGTTCGACCGCCATC
TGCGCCGATTCCGCGAGCAACTGCGCGTACAGCGCGACGCAACGGCGGATGCGATCGCGCGGCATTTCCCCGCCGGTACA
CGGATGAACCGGCCGCCGGGCGGAATGCTGCTCTGGATCGCGCTGCCCGACGGCGTGCATTCGGACGCATTGTTCGATGC
CGCGCTCGCTCGAGGCATCAGGATCGCACCCGGTTCGATCTTTTCGAACTCGAATCGCTTCGACGCCTATATCCGGATCG
GCTGCACGCGGGCCTTCGACGCGGCACAGGAGGCGGCATTCGACACGCTCGGCCGCCTCGTGCGCGACGCGATCGCCGCG
GGCTGA

Upstream 100 bases:

>100_bases
GGTGGGTTTACCTCGCATCTGTATCTGGCGCGCACTGCGCGCGGCCGGCACGATCGCTCGCATGACACCCTTTGCCGACA
TCGCCCGAGAAGCCTTGCCG

Downstream 100 bases:

>100_bases
GCGGGCGCGATCGCTCGCGCGAACGGCTCGCGAGCGGGAAGGCGCGCGCACGATCAGCGGCCTGCGCTATGTGAGGCGAG
GTGTTCGCGAATCAGGGACA

Product: 2-aminoadipate transaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MDGEPLYERLAEHYRRIIAAGTLSPGDRMPSVRTFMAQHGVSLSTAIQTFRRLEDSGWCEARPRSGYFVRRRASPVLDAL
PEGDAAPLAIAPPFAGLHERVSRVIDRGHTATDALNLGGASAAASLYPTERLQALAIRLLRRKPTLLTDAGRIDALPEFR
HAMAKRALSYGVTVSPDDVMSTSGGVDAVNLALRAVAQPGDTIAIESPAFFGLLQLLESLGMRALEIPASPTTGLSIEAL
EVALNAYPDIRAVVVVPNLQNPLGSVMPDERKAALVALCASRGVAVIEDEPYRELVDAPHTVKPVKAWDRDGTVIYCPSF
NKVLAPGMRLGWISGGRWHARVKMLKFAHSRHNAALLQAVAAEFVGSGAFDRHLRRFREQLRVQRDATADAIARHFPAGT
RMNRPPGGMLLWIALPDGVHSDALFDAALARGIRIAPGSIFSNSNRFDAYIRIGCTRAFDAAQEAAFDTLGRLVRDAIAA
G

Sequences:

>Translated_481_residues
MDGEPLYERLAEHYRRIIAAGTLSPGDRMPSVRTFMAQHGVSLSTAIQTFRRLEDSGWCEARPRSGYFVRRRASPVLDAL
PEGDAAPLAIAPPFAGLHERVSRVIDRGHTATDALNLGGASAAASLYPTERLQALAIRLLRRKPTLLTDAGRIDALPEFR
HAMAKRALSYGVTVSPDDVMSTSGGVDAVNLALRAVAQPGDTIAIESPAFFGLLQLLESLGMRALEIPASPTTGLSIEAL
EVALNAYPDIRAVVVVPNLQNPLGSVMPDERKAALVALCASRGVAVIEDEPYRELVDAPHTVKPVKAWDRDGTVIYCPSF
NKVLAPGMRLGWISGGRWHARVKMLKFAHSRHNAALLQAVAAEFVGSGAFDRHLRRFREQLRVQRDATADAIARHFPAGT
RMNRPPGGMLLWIALPDGVHSDALFDAALARGIRIAPGSIFSNSNRFDAYIRIGCTRAFDAAQEAAFDTLGRLVRDAIAA
G
>Mature_481_residues
MDGEPLYERLAEHYRRIIAAGTLSPGDRMPSVRTFMAQHGVSLSTAIQTFRRLEDSGWCEARPRSGYFVRRRASPVLDAL
PEGDAAPLAIAPPFAGLHERVSRVIDRGHTATDALNLGGASAAASLYPTERLQALAIRLLRRKPTLLTDAGRIDALPEFR
HAMAKRALSYGVTVSPDDVMSTSGGVDAVNLALRAVAQPGDTIAIESPAFFGLLQLLESLGMRALEIPASPTTGLSIEAL
EVALNAYPDIRAVVVVPNLQNPLGSVMPDERKAALVALCASRGVAVIEDEPYRELVDAPHTVKPVKAWDRDGTVIYCPSF
NKVLAPGMRLGWISGGRWHARVKMLKFAHSRHNAALLQAVAAEFVGSGAFDRHLRRFREQLRVQRDATADAIARHFPAGT
RMNRPPGGMLLWIALPDGVHSDALFDAALARGIRIAPGSIFSNSNRFDAYIRIGCTRAFDAAQEAAFDTLGRLVRDAIAA
G

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=321, Percent_Identity=26.4797507788162, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI33469970, Length=321, Percent_Identity=26.4797507788162, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI4507369, Length=159, Percent_Identity=30.8176100628931, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI1790797, Length=478, Percent_Identity=34.1004184100418, Blast_Score=288, Evalue=7e-79,
Organism=Escherichia coli, GI1787710, Length=476, Percent_Identity=33.6134453781513, Blast_Score=284, Evalue=1e-77,
Organism=Caenorhabditis elegans, GI17567663, Length=324, Percent_Identity=26.5432098765432, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6321236, Length=321, Percent_Identity=26.4797507788162, Blast_Score=103, Evalue=9e-23,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 51993; Mature: 51993

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGEPLYERLAEHYRRIIAAGTLSPGDRMPSVRTFMAQHGVSLSTAIQTFRRLEDSGWCE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
ARPRSGYFVRRRASPVLDALPEGDAAPLAIAPPFAGLHERVSRVIDRGHTATDALNLGGA
CCCCCCCEEECCCCHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCC
SAAASLYPTERLQALAIRLLRRKPTLLTDAGRIDALPEFRHAMAKRALSYGVTVSPDDVM
HHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCEECCHHHH
STSGGVDAVNLALRAVAQPGDTIAIESPAFFGLLQLLESLGMRALEIPASPTTGLSIEAL
CCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHH
EVALNAYPDIRAVVVVPNLQNPLGSVMPDERKAALVALCASRGVAVIEDEPYRELVDAPH
HHHHHCCCCCEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHCCCC
TVKPVKAWDRDGTVIYCPSFNKVLAPGMRLGWISGGRWHARVKMLKFAHSRHNAALLQAV
CCCCHHHCCCCCCEEECCCCCHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHH
AAEFVGSGAFDRHLRRFREQLRVQRDATADAIARHFPAGTRMNRPPGGMLLWIALPDGVH
HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
SDALFDAALARGIRIAPGSIFSNSNRFDAYIRIGCTRAFDAAQEAAFDTLGRLVRDAIAA
HHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHC
G
C
>Mature Secondary Structure
MDGEPLYERLAEHYRRIIAAGTLSPGDRMPSVRTFMAQHGVSLSTAIQTFRRLEDSGWCE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
ARPRSGYFVRRRASPVLDALPEGDAAPLAIAPPFAGLHERVSRVIDRGHTATDALNLGGA
CCCCCCCEEECCCCHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCC
SAAASLYPTERLQALAIRLLRRKPTLLTDAGRIDALPEFRHAMAKRALSYGVTVSPDDVM
HHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCEECCHHHH
STSGGVDAVNLALRAVAQPGDTIAIESPAFFGLLQLLESLGMRALEIPASPTTGLSIEAL
CCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHH
EVALNAYPDIRAVVVVPNLQNPLGSVMPDERKAALVALCASRGVAVIEDEPYRELVDAPH
HHHHHCCCCCEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHCCCC
TVKPVKAWDRDGTVIYCPSFNKVLAPGMRLGWISGGRWHARVKMLKFAHSRHNAALLQAV
CCCCHHHCCCCCCEEECCCCCHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHH
AAEFVGSGAFDRHLRRFREQLRVQRDATADAIARHFPAGTRMNRPPGGMLLWIALPDGVH
HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
SDALFDAALARGIRIAPGSIFSNSNRFDAYIRIGCTRAFDAAQEAAFDTLGRLVRDAIAA
HHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]