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The map label for this gene is ppd [H]

Identifier: 189352806

GI number: 189352806

Start: 925917

End: 927104

Strand: Reverse

Name: ppd [H]

Synonym: BMULJ_04038

Alternate gene names: 189352806

Gene position: 927104-925917 (Counterclockwise)

Preceding gene: 189352807

Following gene: 189352805

Centisome position: 37.49

GC content: 70.29

Gene sequence:

>1188_bases
ATGATCGAAGCGGCCCAGTTCGTCGAGGCCGCACGCGCACGCGGCTTCGACTGGTACGCGGGCGTGCCCTGCTCGTACCT
GACGCCGTTCATCAACTACGTGCTGCAGGATCCGACGCTGCACTACCTGTCGGCCGCGAACGAAGGCGACGCGGTCGCGC
TGATCGCCGGCGCGACGCTCGGCGGCAAGCGCGGGATTGCGATGATGCAGAATTCGGGGCTTGGCAATGCGGTGAGCCCG
CTCACGTCGCTCACCTGGACGTTCCGCCTGCCGCAGCTGCTGATCGTCACCTGGCGCGGTCAGCCGGGCGTCGCCGACGA
ACCGCAGCACGCGCTGATGGGGCCGATCACGCCCGCGATGCTCGACACGATGGAGATCCCGTGGGAGACGTTCCCGACCG
ACCCCGAACAGGTCGGCCCGGCGCTCGACCGCGCGATCGCGCACATGGACGCGACGGGTCGCCCGTACGCGCTCGTGATG
CAGAAAGGCAGCGTCGCGCCGTATGAGCTGAAGGCGAATCCGGCTGCGCAGCCGCGCGCGCATGTCGCCGCGCGGTCGTC
GTCGCGTGCGGCGTCGCCCGATGCATGGCCGACGCGTCACGATGCGCTGCAGCGCGTGATCGCGCATACGCCGGTCGACT
CGACCGTCGTGCTCGCGTCGACCGGTTTCTGCGGCCGCGAGCTGTACGCGCTCGACGATCGGCCGAACCAGCTGTACATG
GTCGGCTCGATGGGCTGTGTGACGCCGCTCGCGCTCGGTCTCGCGCTCGCGCGCCCCGATCTGCGCGTGGTCGCTGTGGA
CGGCGACGGCGCCGCACTGATGCGCATGGGCGCATTCGCGACGCTCGGCACGTACGGCCCGTCGAATCTCACGCACGTGC
TGCTCGACAACGGGGCGCACGAATCGACGGGCGGGCAGGCGACCGTATCGCAGCATGTGTCGTTCGCAGGCGTCGCGGCC
GCGTGCGGCTATGCGTCGGCAGTCGAAGGCGACACGCTTGACGTGCTCGATGCGGCGTTGTCCGCGTCGGACGACGCGAG
CGGCGCGCAGTTCGTGCGGCTCGCGATCCGCACGGGCGTGCCCGACGGCCTGCCGCGCCCGACCGTGACGCCGGTCGAGG
TCAAGACTCGTCTGATGCGGCACATCGGCGCCGCGCAGACCGAAGCCCACGCTGAAGGAGCCCATTGA

Upstream 100 bases:

>100_bases
GGCGCGGCGTCAACGATCTCGAAGACTTCCGCCGCGCGGGCGACTTCGCGCACGGCCAGACGCCGATGTCCGAGCCGGGC
GCCGGCAACGGGGGCGCACG

Downstream 100 bases:

>100_bases
TGCTGCTGCTGAATCCCGGCCCGGTCACGCTCACCGAACGCGTGCGCCGCAGCCTGCTGCAACCGGACCTATGCCATCGC
GAAAGCGAGTTCTTCGATCT

Product: thiamine pyrophosphate-requiring 3-phosphonopyruvate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MIEAAQFVEAARARGFDWYAGVPCSYLTPFINYVLQDPTLHYLSAANEGDAVALIAGATLGGKRGIAMMQNSGLGNAVSP
LTSLTWTFRLPQLLIVTWRGQPGVADEPQHALMGPITPAMLDTMEIPWETFPTDPEQVGPALDRAIAHMDATGRPYALVM
QKGSVAPYELKANPAAQPRAHVAARSSSRAASPDAWPTRHDALQRVIAHTPVDSTVVLASTGFCGRELYALDDRPNQLYM
VGSMGCVTPLALGLALARPDLRVVAVDGDGAALMRMGAFATLGTYGPSNLTHVLLDNGAHESTGGQATVSQHVSFAGVAA
ACGYASAVEGDTLDVLDAALSASDDASGAQFVRLAIRTGVPDGLPRPTVTPVEVKTRLMRHIGAAQTEAHAEGAH

Sequences:

>Translated_395_residues
MIEAAQFVEAARARGFDWYAGVPCSYLTPFINYVLQDPTLHYLSAANEGDAVALIAGATLGGKRGIAMMQNSGLGNAVSP
LTSLTWTFRLPQLLIVTWRGQPGVADEPQHALMGPITPAMLDTMEIPWETFPTDPEQVGPALDRAIAHMDATGRPYALVM
QKGSVAPYELKANPAAQPRAHVAARSSSRAASPDAWPTRHDALQRVIAHTPVDSTVVLASTGFCGRELYALDDRPNQLYM
VGSMGCVTPLALGLALARPDLRVVAVDGDGAALMRMGAFATLGTYGPSNLTHVLLDNGAHESTGGQATVSQHVSFAGVAA
ACGYASAVEGDTLDVLDAALSASDDASGAQFVRLAIRTGVPDGLPRPTVTPVEVKTRLMRHIGAAQTEAHAEGAH
>Mature_395_residues
MIEAAQFVEAARARGFDWYAGVPCSYLTPFINYVLQDPTLHYLSAANEGDAVALIAGATLGGKRGIAMMQNSGLGNAVSP
LTSLTWTFRLPQLLIVTWRGQPGVADEPQHALMGPITPAMLDTMEIPWETFPTDPEQVGPALDRAIAHMDATGRPYALVM
QKGSVAPYELKANPAAQPRAHVAARSSSRAASPDAWPTRHDALQRVIAHTPVDSTVVLASTGFCGRELYALDDRPNQLYM
VGSMGCVTPLALGLALARPDLRVVAVDGDGAALMRMGAFATLGTYGPSNLTHVLLDNGAHESTGGQATVSQHVSFAGVAA
ACGYASAVEGDTLDVLDAALSASDDASGAQFVRLAIRTGVPDGLPRPTVTPVEVKTRLMRHIGAAQTEAHAEGAH

Specific function: Unknown

COG id: COG0028

COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TPP enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017684
- InterPro:   IPR012001
- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C; PF02776 TPP_enzyme_N [H]

EC number: =4.1.1.82 [H]

Molecular weight: Translated: 41436; Mature: 41436

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00187 TPP_ENZYMES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEAAQFVEAARARGFDWYAGVPCSYLTPFINYVLQDPTLHYLSAANEGDAVALIAGATL
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHCCCCCCCEEEEEEECCC
GGKRGIAMMQNSGLGNAVSPLTSLTWTFRLPQLLIVTWRGQPGVADEPQHALMGPITPAM
CCCCCEEEEECCCCCCHHHHHHHHEEEEECCEEEEEEECCCCCCCCCCCHHHHCCCCHHH
LDTMEIPWETFPTDPEQVGPALDRAIAHMDATGRPYALVMQKGSVAPYELKANPAAQPRA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCHH
HVAARSSSRAASPDAWPTRHDALQRVIAHTPVDSTVVLASTGFCGRELYALDDRPNQLYM
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEE
VGSMGCVTPLALGLALARPDLRVVAVDGDGAALMRMGAFATLGTYGPSNLTHVLLDNGAH
EECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
ESTGGQATVSQHVSFAGVAAACGYASAVEGDTLDVLDAALSASDDASGAQFVRLAIRTGV
CCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCHHEEEEHHHCCC
PDGLPRPTVTPVEVKTRLMRHIGAAQTEAHAEGAH
CCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MIEAAQFVEAARARGFDWYAGVPCSYLTPFINYVLQDPTLHYLSAANEGDAVALIAGATL
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHCCCCCCCEEEEEEECCC
GGKRGIAMMQNSGLGNAVSPLTSLTWTFRLPQLLIVTWRGQPGVADEPQHALMGPITPAM
CCCCCEEEEECCCCCCHHHHHHHHEEEEECCEEEEEEECCCCCCCCCCCHHHHCCCCHHH
LDTMEIPWETFPTDPEQVGPALDRAIAHMDATGRPYALVMQKGSVAPYELKANPAAQPRA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCHH
HVAARSSSRAASPDAWPTRHDALQRVIAHTPVDSTVVLASTGFCGRELYALDDRPNQLYM
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEE
VGSMGCVTPLALGLALARPDLRVVAVDGDGAALMRMGAFATLGTYGPSNLTHVLLDNGAH
EECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
ESTGGQATVSQHVSFAGVAAACGYASAVEGDTLDVLDAALSASDDASGAQFVRLAIRTGV
CCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCCCCHHEEEEHHHCCC
PDGLPRPTVTPVEVKTRLMRHIGAAQTEAHAEGAH
CCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10786631 [H]