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The map label for this gene is ydaV [C]

Identifier: 189352554

GI number: 189352554

Start: 626167

End: 626916

Strand: Reverse

Name: ydaV [C]

Synonym: BMULJ_03784

Alternate gene names: 189352554

Gene position: 626916-626167 (Counterclockwise)

Preceding gene: 189352555

Following gene: 189352553

Centisome position: 25.35

GC content: 62.27

Gene sequence:

>750_bases
ATGTTGATGCAGCACACCCTTACCCAGCTAAAGGCGCTCAAACTGGACGGCATGGCTCGCGCGTTCGAGGAGCAGTCAAC
GCTCACGGCAAGCACCAGCCTGTCATTCGAGGAACGCGTGGGCATGCTCGTAGATCGCGAGCTGGCCTGGCGTGATACGC
GACGACTCGAACGTTTGCTGCGCGCCGCGAAGCTCAAGAACCCACAGGCCTGCGTCGAAGACATTGAATACCGGCAAACC
CGTGGGCTGGACCAGCGCATCGTCGCCACGCTCGCCGGCTGCGACTGGGTGCGCAATGCTCAGAACCTGATCCTGACCGG
CCCCACCGGCGCGGGCAAGACGTGGCTCGCTTGCGCGTTCGGCCAGCAGGCGTGCCGGCAGGGCTTCTCCGTGTTCTATG
TGCGCGTCGCGCGGCTGTTCGAAGAGCTGAAAATCGCGCACGGCGACGGCAGCTTCACACGTCGGCTTGCGCAACTCGCG
AAGATTGATGTGCTGATCCTCGACGATTGGGGCTTGCAGGATCTCGACCAGGCGGCGCGCAATGATCTGCTTGAGGTACT
TGATGATCGTGTCGGTACGCGCTCGACTGTGATCACCAGCCAGTTGCCGCTCGAACACTGGCACGCGTGGCTGCAGGACC
CCACGCTCGCCGATGCGATTCTCGATCGGCTCGTGCATCAGGCCCACAAGCTTCCGGTCAAGGGCGATTCGATGAGAAAG
AAAACGAAATCCGAGTCCGCTGACGCCTGA

Upstream 100 bases:

>100_bases
CTGCAGCCCTCGCTCCCGACCACGCCCGCCGAATGGCGCTCGCCCGAGCACGAGAACGTGCGCGGCCCCGACTACTACCA
CTGACCCGAAGGAGGTCACG

Downstream 100 bases:

>100_bases
TCGTGATCACCGTCGCTATAATCCATTGACCGCGCAACACCACCTTCCAGACTGATCACGTTCGCCGAAACGATTGATCA
CCATCGCCGAAATCCGCACT

Product: IS408a transposase

Products: NA

Alternate protein names: ORF2

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLMQHTLTQLKALKLDGMARAFEEQSTLTASTSLSFEERVGMLVDRELAWRDTRRLERLLRAAKLKNPQACVEDIEYRQT
RGLDQRIVATLAGCDWVRNAQNLILTGPTGAGKTWLACAFGQQACRQGFSVFYVRVARLFEELKIAHGDGSFTRRLAQLA
KIDVLILDDWGLQDLDQAARNDLLEVLDDRVGTRSTVITSQLPLEHWHAWLQDPTLADAILDRLVHQAHKLPVKGDSMRK
KTKSESADA

Sequences:

>Translated_249_residues
MLMQHTLTQLKALKLDGMARAFEEQSTLTASTSLSFEERVGMLVDRELAWRDTRRLERLLRAAKLKNPQACVEDIEYRQT
RGLDQRIVATLAGCDWVRNAQNLILTGPTGAGKTWLACAFGQQACRQGFSVFYVRVARLFEELKIAHGDGSFTRRLAQLA
KIDVLILDDWGLQDLDQAARNDLLEVLDDRVGTRSTVITSQLPLEHWHAWLQDPTLADAILDRLVHQAHKLPVKGDSMRK
KTKSESADA
>Mature_249_residues
MLMQHTLTQLKALKLDGMARAFEEQSTLTASTSLSFEERVGMLVDRELAWRDTRRLERLLRAAKLKNPQACVEDIEYRQT
RGLDQRIVATLAGCDWVRNAQNLILTGPTGAGKTWLACAFGQQACRQGFSVFYVRVARLFEELKIAHGDGSFTRRLAQLA
KIDVLILDDWGLQDLDQAARNDLLEVLDDRVGTRSTVITSQLPLEHWHAWLQDPTLADAILDRLVHQAHKLPVKGDSMRK
KTKSESADA

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ISTB_BURM1 (P55923)

Other databases:

- EMBL:   CP000869
- EMBL:   CP000870
- EMBL:   CP000870
- EMBL:   CP000871
- EMBL:   AP009386
- EMBL:   AP009387
- EMBL:   AP009387
- EMBL:   AP009388
- EMBL:   L09108
- RefSeq:   YP_001573660.1
- RefSeq:   YP_001584699.1
- RefSeq:   YP_001585591.1
- RefSeq:   YP_001585737.1
- RefSeq:   YP_001941545.1
- RefSeq:   YP_001941678.1
- RefSeq:   YP_001941992.1
- RefSeq:   YP_001948181.1
- ProteinModelPortal:   P55923
- SMR:   P55923
- GeneID:   5764791
- GeneID:   5768105
- GeneID:   5770253
- GeneID:   5771063
- GeneID:   6356515
- GeneID:   6356629
- GeneID:   6357072
- GeneID:   6360807
- GenomeReviews:   AP009386_GR
- GenomeReviews:   AP009387_GR
- GenomeReviews:   AP009387_GR
- GenomeReviews:   AP009388_GR
- GenomeReviews:   CP000869_GR
- GenomeReviews:   CP000870_GR
- GenomeReviews:   CP000870_GR
- GenomeReviews:   CP000871_GR
- KEGG:   bmj:BMULJ_03784
- KEGG:   bmj:BMULJ_05739
- KEGG:   bmj:BMULJ_05880
- KEGG:   bmj:BMULJ_06212
- KEGG:   bmu:Bmul_4731
- KEGG:   bmu:Bmul_5629
- KEGG:   bmu:Bmul_5782
- KEGG:   bmu:Bmul_6207
- HOGENOM:   HBG695266
- OMA:   RWYEIIG
- ProtClustDB:   CLSK933007
- InterPro:   IPR003593
- InterPro:   IPR002611
- InterPro:   IPR013690
- SMART:   SM00382

Pfam domain/function: PF01695 IstB; PF08483 IstB_N

EC number: NA

Molecular weight: Translated: 28092; Mature: 28092

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMQHTLTQLKALKLDGMARAFEEQSTLTASTSLSFEERVGMLVDRELAWRDTRRLERLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RAAKLKNPQACVEDIEYRQTRGLDQRIVATLAGCDWVRNAQNLILTGPTGAGKTWLACAF
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH
GQQACRQGFSVFYVRVARLFEELKIAHGDGSFTRRLAQLAKIDVLILDDWGLQDLDQAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHH
NDLLEVLDDRVGTRSTVITSQLPLEHWHAWLQDPTLADAILDRLVHQAHKLPVKGDSMRK
HHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
KTKSESADA
HHCCCCCCC
>Mature Secondary Structure
MLMQHTLTQLKALKLDGMARAFEEQSTLTASTSLSFEERVGMLVDRELAWRDTRRLERLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RAAKLKNPQACVEDIEYRQTRGLDQRIVATLAGCDWVRNAQNLILTGPTGAGKTWLACAF
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH
GQQACRQGFSVFYVRVARLFEELKIAHGDGSFTRRLAQLAKIDVLILDDWGLQDLDQAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHH
NDLLEVLDDRVGTRSTVITSQLPLEHWHAWLQDPTLADAILDRLVHQAHKLPVKGDSMRK
HHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
KTKSESADA
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7518087