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The map label for this gene is 189352555

Identifier: 189352555

GI number: 189352555

Start: 626933

End: 628489

Strand: Reverse

Name: 189352555

Synonym: BMULJ_03785

Alternate gene names: NA

Gene position: 628489-626933 (Counterclockwise)

Preceding gene: 189352556

Following gene: 189352554

Centisome position: 25.41

GC content: 65.45

Gene sequence:

>1557_bases
ATGCCGACACCTCGGATGAGCATGCGCAAATTGAAGGAAGTCCTGCGACTAAAGTGGGCGTGTGGCCTGACGCATCGGCA
GATCAGCCGGGCTATCGGCATCAGCGTCGGTGCCGTCTCGAAGTTCGCGGCCCAAGCCAGCCAGGCGGGACTCGATTGGG
CGGCAGCCGAAGCAATGTCCGACGACGAACTGGACGCGCGCCTGAGGCCTGCGGCAACCAATGCCGCGGCGACGACGACG
CGACGCATCGAGCCCGACTACACGGCATTGCATCGCGAGCTGCGCCGCAAGGGCGTGACGCTGCAACTGCTGTGGGAAGA
ATACGCTGAAGCGAACCCCGGCCAGCGGACGTACCGCTACACGCAGTTCTGCCAGAAGTACAAGGATTGGGCGAAGTCGA
TCAAGCGCTCGATGCGTCAGCAGCACCGCGCCGGCGAGAAGCTGTTCGCGGACTTCGCGGGTCCCACCGTGCCGGTCCTG
GCGAGCGATGGCGGCGTCGAGTTCGAGGCGCACGTGTTCGTTGCCGTGCTCGGCGCATCCAACTACACGTTCGCGTGCGC
GACGCGCACCGAGACGATGGCGGACTGGATCGGCAGCCTGTGCGATGCGCTAGAGTTCATTGGCGGCGTGCCCGAGCTGC
TCGTGCCCGACAACCCGAAGGCGCTGATCGCGCGACCCGACCGTTACGAACCCGGACTCGGCACGACCACGCAGGACTTC
GTGAACCACTACGGCACCGCGATGCTGCCGGCGCGTCCGCGCAAACCGCAGGACAAGGCCAAGGTCGAAGTCGGCGTGCA
GATCGTCGAGCGCTGGGTGCTGGCCCGACTGCGCCACTATCGCTTCTACAGTCTGGCTGAACTCAACAAGGCGATTGCAG
AACTGATCGCCGACCTAAACCAGCGCCCGTTCAAGCGGCTCGAAGGCAACCGGCGTGAATGGTTCGAACGGCTGGACCAA
CCCGTCCTGCGCCCGTTGCCCGTGCGTCGCTACGAGATCGCCACCTTCCAGAAGTGCCGTGTGAACATCGATTACCACGT
CGATGTCGGCGGCCACTATTACAGCGTCCCGCATAGCCTCGCACGGCAGGAGGTCTGGGCGCGTATCACACGCCACGGCG
TAGAGATCCTGCATGGCGGCAAGCGTGTCGCTGCGCACGCTCGCTCGCGCCTCAAAGGCAAACACACGACCATCGCCGAA
CACATGCCGGCTGCGCATCGCGCGCACATGGAATGGACGCCTGGGCGCCTGCTCAACTGGGGCGCATCCGTCGGCCCCGG
CGCCGAGGCTGTCGTGCGGCATCTGCTGACCAACAAACCTCACCCCGAGATGGGCTATCGCGCCTGTCTCGGTCTTCTCT
CGCTCGCGCGCAAGTACGGCAAACACCGCCTCGAGGCCGCATGCCAGCGTGCATTGAAGATCGGCTCGCCCACGCGTCGC
TCCGTGCTGTCAATCCTGGAAGCGGGACTTGACCTGCAGCCCTCGCTCCCGACCACGCCCGCCGAATGGCGCTCGCCCGA
GCACGAGAACGTGCGCGGCCCCGACTACTACCACTGA

Upstream 100 bases:

>100_bases
ACGTAACCGGAACGTAATCCGGGTTTGAGTCTGGCGGTGGCGTTGCGCATGTATTCACCGACGGCGTTAGCCTGCTCCCT
TTTTTGCGGGAGAAGTGCCG

Downstream 100 bases:

>100_bases
CCCGAAGGAGGTCACGATGTTGATGCAGCACACCCTTACCCAGCTAAAGGCGCTCAAACTGGACGGCATGGCTCGCGCGT
TCGAGGAGCAGTCAACGCTC

Product: IS408a transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MPTPRMSMRKLKEVLRLKWACGLTHRQISRAIGISVGAVSKFAAQASQAGLDWAAAEAMSDDELDARLRPAATNAAATTT
RRIEPDYTALHRELRRKGVTLQLLWEEYAEANPGQRTYRYTQFCQKYKDWAKSIKRSMRQQHRAGEKLFADFAGPTVPVL
ASDGGVEFEAHVFVAVLGASNYTFACATRTETMADWIGSLCDALEFIGGVPELLVPDNPKALIARPDRYEPGLGTTTQDF
VNHYGTAMLPARPRKPQDKAKVEVGVQIVERWVLARLRHYRFYSLAELNKAIAELIADLNQRPFKRLEGNRREWFERLDQ
PVLRPLPVRRYEIATFQKCRVNIDYHVDVGGHYYSVPHSLARQEVWARITRHGVEILHGGKRVAAHARSRLKGKHTTIAE
HMPAAHRAHMEWTPGRLLNWGASVGPGAEAVVRHLLTNKPHPEMGYRACLGLLSLARKYGKHRLEAACQRALKIGSPTRR
SVLSILEAGLDLQPSLPTTPAEWRSPEHENVRGPDYYH

Sequences:

>Translated_518_residues
MPTPRMSMRKLKEVLRLKWACGLTHRQISRAIGISVGAVSKFAAQASQAGLDWAAAEAMSDDELDARLRPAATNAAATTT
RRIEPDYTALHRELRRKGVTLQLLWEEYAEANPGQRTYRYTQFCQKYKDWAKSIKRSMRQQHRAGEKLFADFAGPTVPVL
ASDGGVEFEAHVFVAVLGASNYTFACATRTETMADWIGSLCDALEFIGGVPELLVPDNPKALIARPDRYEPGLGTTTQDF
VNHYGTAMLPARPRKPQDKAKVEVGVQIVERWVLARLRHYRFYSLAELNKAIAELIADLNQRPFKRLEGNRREWFERLDQ
PVLRPLPVRRYEIATFQKCRVNIDYHVDVGGHYYSVPHSLARQEVWARITRHGVEILHGGKRVAAHARSRLKGKHTTIAE
HMPAAHRAHMEWTPGRLLNWGASVGPGAEAVVRHLLTNKPHPEMGYRACLGLLSLARKYGKHRLEAACQRALKIGSPTRR
SVLSILEAGLDLQPSLPTTPAEWRSPEHENVRGPDYYH
>Mature_517_residues
PTPRMSMRKLKEVLRLKWACGLTHRQISRAIGISVGAVSKFAAQASQAGLDWAAAEAMSDDELDARLRPAATNAAATTTR
RIEPDYTALHRELRRKGVTLQLLWEEYAEANPGQRTYRYTQFCQKYKDWAKSIKRSMRQQHRAGEKLFADFAGPTVPVLA
SDGGVEFEAHVFVAVLGASNYTFACATRTETMADWIGSLCDALEFIGGVPELLVPDNPKALIARPDRYEPGLGTTTQDFV
NHYGTAMLPARPRKPQDKAKVEVGVQIVERWVLARLRHYRFYSLAELNKAIAELIADLNQRPFKRLEGNRREWFERLDQP
VLRPLPVRRYEIATFQKCRVNIDYHVDVGGHYYSVPHSLARQEVWARITRHGVEILHGGKRVAAHARSRLKGKHTTIAEH
MPAAHRAHMEWTPGRLLNWGASVGPGAEAVVRHLLTNKPHPEMGYRACLGLLSLARKYGKHRLEAACQRALKIGSPTRRS
VLSILEAGLDLQPSLPTTPAEWRSPEHENVRGPDYYH

Specific function: Required for the transposition of the insertion element (Potential)

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): T408_BURM1 (Q51649)

Other databases:

- EMBL:   L09108
- EMBL:   CP000869
- EMBL:   CP000870
- EMBL:   CP000871
- EMBL:   AP009386
- EMBL:   AP009387
- EMBL:   AP009388
- RefSeq:   YP_001573659.1
- RefSeq:   YP_001584698.1
- RefSeq:   YP_001585590.1
- RefSeq:   YP_001941679.1
- RefSeq:   YP_001941993.1
- RefSeq:   YP_001948182.1
- GeneID:   5764827
- GeneID:   5769161
- GeneID:   5770252
- GeneID:   6356630
- GeneID:   6357073
- GeneID:   6360808
- GenomeReviews:   AP009386_GR
- GenomeReviews:   AP009387_GR
- GenomeReviews:   AP009388_GR
- GenomeReviews:   CP000869_GR
- GenomeReviews:   CP000870_GR
- GenomeReviews:   CP000871_GR
- KEGG:   bmj:BMULJ_03785
- KEGG:   bmj:BMULJ_05881
- KEGG:   bmj:BMULJ_06213
- KEGG:   bmu:Bmul_4730
- KEGG:   bmu:Bmul_5628
- KEGG:   bmu:Bmul_6206
- HOGENOM:   HBG515540
- OMA:   FERERVN
- ProtClustDB:   CLSK933006
- GO:   GO:0032196
- InterPro:   IPR017895
- InterPro:   IPR001584
- InterPro:   IPR012337

Pfam domain/function: PF00665 rve; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 58425; Mature: 58293

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS50532 HTH_IS408; PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPRMSMRKLKEVLRLKWACGLTHRQISRAIGISVGAVSKFAAQASQAGLDWAAAEAMS
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCC
DDELDARLRPAATNAAATTTRRIEPDYTALHRELRRKGVTLQLLWEEYAEANPGQRTYRY
CCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCEEEEHHHHHHCCCCCHHHHHH
TQFCQKYKDWAKSIKRSMRQQHRAGEKLFADFAGPTVPVLASDGGVEFEAHVFVAVLGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEHEEEEEEECCC
NYTFACATRTETMADWIGSLCDALEFIGGVPELLVPDNPKALIARPDRYEPGLGTTTQDF
CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEECCCCCCCCCCCCHHHH
VNHYGTAMLPARPRKPQDKAKVEVGVQIVERWVLARLRHYRFYSLAELNKAIAELIADLN
HHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QRPFKRLEGNRREWFERLDQPVLRPLPVRRYEIATFQKCRVNIDYHVDVGGHYYSVPHSL
CCHHHHHCCCHHHHHHHHCCHHHCCCCCCHHHHHHHHHHEEEEEEEEECCCEEECCCHHH
ARQEVWARITRHGVEILHGGKRVAAHARSRLKGKHTTIAEHMPAAHRAHMEWTPGRLLNW
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHCCCCCCCCHHHHC
GASVGPGAEAVVRHLLTNKPHPEMGYRACLGLLSLARKYGKHRLEAACQRALKIGSPTRR
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
SVLSILEAGLDLQPSLPTTPAEWRSPEHENVRGPDYYH
HHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTPRMSMRKLKEVLRLKWACGLTHRQISRAIGISVGAVSKFAAQASQAGLDWAAAEAMS
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHCC
DDELDARLRPAATNAAATTTRRIEPDYTALHRELRRKGVTLQLLWEEYAEANPGQRTYRY
CCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCEEEEHHHHHHCCCCCHHHHHH
TQFCQKYKDWAKSIKRSMRQQHRAGEKLFADFAGPTVPVLASDGGVEFEAHVFVAVLGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEHEEEEEEECCC
NYTFACATRTETMADWIGSLCDALEFIGGVPELLVPDNPKALIARPDRYEPGLGTTTQDF
CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEECCCCCCCCCCCCHHHH
VNHYGTAMLPARPRKPQDKAKVEVGVQIVERWVLARLRHYRFYSLAELNKAIAELIADLN
HHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QRPFKRLEGNRREWFERLDQPVLRPLPVRRYEIATFQKCRVNIDYHVDVGGHYYSVPHSL
CCHHHHHCCCHHHHHHHHCCHHHCCCCCCHHHHHHHHHHEEEEEEEEECCCEEECCCHHH
ARQEVWARITRHGVEILHGGKRVAAHARSRLKGKHTTIAEHMPAAHRAHMEWTPGRLLNW
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHCCCCCCCCHHHHC
GASVGPGAEAVVRHLLTNKPHPEMGYRACLGLLSLARKYGKHRLEAACQRALKIGSPTRR
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
SVLSILEAGLDLQPSLPTTPAEWRSPEHENVRGPDYYH
HHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7518087