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The map label for this gene is ybiF [C]

Identifier: 189352404

GI number: 189352404

Start: 462307

End: 463230

Strand: Reverse

Name: ybiF [C]

Synonym: BMULJ_03623

Alternate gene names: 189352404

Gene position: 463230-462307 (Counterclockwise)

Preceding gene: 189352405

Following gene: 189352403

Centisome position: 18.73

GC content: 70.35

Gene sequence:

>924_bases
ATGAAGCCCGAAACCCGCCAGCACCTCCGCGCCAACCTGCTGATGCTCGCCGCCGCCGCGATCTGGGGCTCGGCATTCGT
CGCGCAGCGGCTGAGCCTCGACGTGATCGGGCCGTTCCTGTTCACCGGGCTGCGCTTCCTGCTCGGCGCGCTCGTGCTCG
TCCCGCTGCTGAACTTCAATGCGGCATCGCGCGCGCAGCTCGCGGCGATCCGGCGCGACCCCGCGCTGCTGCTGCCGGGC
GTCGCGCTCGGCGCGCTGCTCGCGGTATCGATCTCGCTGCAGCAGATCGGCCTGCAGTACACGCGGATCGCCAATGCCGG
CTTCATCAGCTCGCTGTACGTCGTGATCGTCCCGCTGATGGGCGTGTTCGCGCGGCACCGGATCGGCGTCGGCACGTGGT
TCGGCGCGCTGCTCGCCGCGATCGGCCTGTATTTCCTCAGCATCGACGAACATTTCTCGGTGCTGTACGGCGACTGGTTC
CAGCTCGCCGGCGCCGTGATCATCGCCGCGCATGTGATGGCCGTCGGCCATCTCGCGAAGCGCCACGATCCGCTCGTGCT
CGCGTTCCTGCAGTTCGTCGTCTGCGGCGCGCTGTGCCTCGCGGTCGGCATCGCGGTCGAGCCCGTCAGCGTCGCGATGC
TGCGCGGCGCGCTGCCGACGGTGCTCTACGGCGGGCTGCTGTCGGTCGGCGTCGGCTACACGCTGCAGGTCGTCGCGCAG
CGCGACGCGGCACCCGCGCACGCGGCGGTGATCTTCAGCATGGAAGGCGTGTTCGCGGCCGTCGCCGGCTGGGCTGCGCT
CGGCGAAACGCTGACGCTGCGCGCGCTCGTCGGCTGCGCGCTGATGCTCGCCGGACTGCTCGCGTGCCAGCTTCTGCCGA
ACGGCGATGCGCGCAAAAAGGACGAAGACGCGCTGCCGGCATGA

Upstream 100 bases:

>100_bases
ACGGCGGCCGCGCTGCGCCGCTTCGCCGACAGTCTTGCAATCCCGGCGTAAACTAGCAGGTTCCGCCCGTTGCGGGCGTC
CCGACCCAAAACCCGATCCC

Downstream 100 bases:

>100_bases
AATACGCCGTCCCTATAATGACGCTTTGCGGGATGTCCCCGCTCACCGCTTCCGACAGGTCTGCCCCGTTCATGTCCGTT
TCAGTCGATCCCGTTGCCGA

Product: drug/metabolite transporter (DMT) superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKPETRQHLRANLLMLAAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLNFNAASRAQLAAIRRDPALLLPG
VALGALLAVSISLQQIGLQYTRIANAGFISSLYVVIVPLMGVFARHRIGVGTWFGALLAAIGLYFLSIDEHFSVLYGDWF
QLAGAVIIAAHVMAVGHLAKRHDPLVLAFLQFVVCGALCLAVGIAVEPVSVAMLRGALPTVLYGGLLSVGVGYTLQVVAQ
RDAAPAHAAVIFSMEGVFAAVAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARKKDEDALPA

Sequences:

>Translated_307_residues
MKPETRQHLRANLLMLAAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLNFNAASRAQLAAIRRDPALLLPG
VALGALLAVSISLQQIGLQYTRIANAGFISSLYVVIVPLMGVFARHRIGVGTWFGALLAAIGLYFLSIDEHFSVLYGDWF
QLAGAVIIAAHVMAVGHLAKRHDPLVLAFLQFVVCGALCLAVGIAVEPVSVAMLRGALPTVLYGGLLSVGVGYTLQVVAQ
RDAAPAHAAVIFSMEGVFAAVAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARKKDEDALPA
>Mature_307_residues
MKPETRQHLRANLLMLAAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLNFNAASRAQLAAIRRDPALLLPG
VALGALLAVSISLQQIGLQYTRIANAGFISSLYVVIVPLMGVFARHRIGVGTWFGALLAAIGLYFLSIDEHFSVLYGDWF
QLAGAVIIAAHVMAVGHLAKRHDPLVLAFLQFVVCGALCLAVGIAVEPVSVAMLRGALPTVLYGGLLSVGVGYTLQVVAQ
RDAAPAHAAVIFSMEGVFAAVAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARKKDEDALPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32209; Mature: 32209

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPETRQHLRANLLMLAAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLNFN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AASRAQLAAIRRDPALLLPGVALGALLAVSISLQQIGLQYTRIANAGFISSLYVVIVPLM
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHH
GVFARHRIGVGTWFGALLAAIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGHLAK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHDPLVLAFLQFVVCGALCLAVGIAVEPVSVAMLRGALPTVLYGGLLSVGVGYTLQVVAQ
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RDAAPAHAAVIFSMEGVFAAVAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARKK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DEDALPA
CCCCCCC
>Mature Secondary Structure
MKPETRQHLRANLLMLAAAAIWGSAFVAQRLSLDVIGPFLFTGLRFLLGALVLVPLLNFN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AASRAQLAAIRRDPALLLPGVALGALLAVSISLQQIGLQYTRIANAGFISSLYVVIVPLM
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHH
GVFARHRIGVGTWFGALLAAIGLYFLSIDEHFSVLYGDWFQLAGAVIIAAHVMAVGHLAK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHDPLVLAFLQFVVCGALCLAVGIAVEPVSVAMLRGALPTVLYGGLLSVGVGYTLQVVAQ
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RDAAPAHAAVIFSMEGVFAAVAGWAALGETLTLRALVGCALMLAGLLACQLLPNGDARKK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DEDALPA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]