Click here to switch to the map view.

The map label for this gene is andR [H]

Identifier: 189352337

GI number: 189352337

Start: 387263

End: 388222

Strand: Reverse

Name: andR [H]

Synonym: BMULJ_03556

Alternate gene names: 189352337

Gene position: 388222-387263 (Counterclockwise)

Preceding gene: 189352343

Following gene: 189352335

Centisome position: 15.7

GC content: 69.9

Gene sequence:

>960_bases
ATGTCCCCAACGCCGTTCGAGCCGCTTGCGCTGCGCGCGCATCGGCTGTTCGAATCCCGCGATCTCGACGAAACGCGCGA
GCGGATCTCGCGCGTGATGCAGCCGCATGCACTGCTGCCGAGCGGCCGTGTGTGCGGCGCGTCGCATATGGATTTCGTGC
GGCTCGGCGGGCTCGGGATCGGCACGATCGCGTTCGGCGATGCGATGCGCGTGCAGGTCGACGCGGTCGACGGCTACTAC
CTGCTGATGTTCTGCCTGTCCGGCCACGCCGACGTGCGTGCGATGGGGCGGCAGCTCGGCGTCGATGCGCAGACGGGCGT
GCTCTGCGCGCCGGGCGAACGCTTCGATGCACTGCTGTCGGCCGATTGCGAGCAGTTCGTGCTGCGGATCGACGCGGCGA
CGGTGCGCACGCTGACCGGCGATCCGCGTGCGACGCTCGATCCGGTGCTGCACGTCAGCGACGCGGCGCTTGCCGCCTGG
CGCGATCAGCTGATGCTGGTCGCGCGCTCGCCGGACCTGCTCGAACGCGCGCGGACGAATCCGCGCGTCGCATCGCAGCT
CGAGCATCTGCTGATCGATCTGCTGATCGAAGGCCACCCGCCGTCCGTGCTGCCGGCGGCACGCCACGATCCGGTGCCCG
GCTTCGTGCGGCGCGCGCAGGAATTCGTCGATGCGCACTACGCGCAGCCGCTGCAGCTCGCCGACATCGTGCGCGCGGCC
GACGTGCCCGAGCGCACGCTGCGCGATGCGTTCCTGCAGTTTCGCGGCACGAGCCCGATGCAATACCTGCGCGCGAAGCG
CCTCGAGCATGCGCGCGAACTGCTGCTCGGCGCGACGCCCGAGCGGCGCATCGCCGACATCGCGCTCGACTGCGGGTTTA
CGCACCTCGGCCGGTTCGCGCTCGCGTATCGGGAAAGATTCGGCGAATCGCCTTCGGACACGCTTGCCGGACGGTCGTAA

Upstream 100 bases:

>100_bases
TTCGGCGGATTTCTGCGCTAGCATGACGCACACACGATGCCGCGCGCGGTCGCGACCGATTCGTCCGACCGATGCGCACG
TCCCCACGAAGGCCCGGCCC

Downstream 100 bases:

>100_bases
GCGCCGGTGCACGCTCCGGCGCCGGGAGGGCCGCGCTCAGGCGCTCAGGCGCTCATGCGTCTCATGCGCTCAGGCGCTCA
TGCATCTCATGCGCTCAGGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSPTPFEPLALRAHRLFESRDLDETRERISRVMQPHALLPSGRVCGASHMDFVRLGGLGIGTIAFGDAMRVQVDAVDGYY
LLMFCLSGHADVRAMGRQLGVDAQTGVLCAPGERFDALLSADCEQFVLRIDAATVRTLTGDPRATLDPVLHVSDAALAAW
RDQLMLVARSPDLLERARTNPRVASQLEHLLIDLLIEGHPPSVLPAARHDPVPGFVRRAQEFVDAHYAQPLQLADIVRAA
DVPERTLRDAFLQFRGTSPMQYLRAKRLEHARELLLGATPERRIADIALDCGFTHLGRFALAYRERFGESPSDTLAGRS

Sequences:

>Translated_319_residues
MSPTPFEPLALRAHRLFESRDLDETRERISRVMQPHALLPSGRVCGASHMDFVRLGGLGIGTIAFGDAMRVQVDAVDGYY
LLMFCLSGHADVRAMGRQLGVDAQTGVLCAPGERFDALLSADCEQFVLRIDAATVRTLTGDPRATLDPVLHVSDAALAAW
RDQLMLVARSPDLLERARTNPRVASQLEHLLIDLLIEGHPPSVLPAARHDPVPGFVRRAQEFVDAHYAQPLQLADIVRAA
DVPERTLRDAFLQFRGTSPMQYLRAKRLEHARELLLGATPERRIADIALDCGFTHLGRFALAYRERFGESPSDTLAGRS
>Mature_318_residues
SPTPFEPLALRAHRLFESRDLDETRERISRVMQPHALLPSGRVCGASHMDFVRLGGLGIGTIAFGDAMRVQVDAVDGYYL
LMFCLSGHADVRAMGRQLGVDAQTGVLCAPGERFDALLSADCEQFVLRIDAATVRTLTGDPRATLDPVLHVSDAALAAWR
DQLMLVARSPDLLERARTNPRVASQLEHLLIDLLIEGHPPSVLPAARHDPVPGFVRRAQEFVDAHYAQPLQLADIVRAAD
VPERTLRDAFLQFRGTSPMQYLRAKRLEHARELLLGATPERRIADIALDCGFTHLGRFALAYRERFGESPSDTLAGRS

Specific function: Regulatory protein of the TOL plasmid xyl operons. XylS activates the xylXYZLTEGFJQKIH operon required for the degradation of toluene, m-xylene and p-xylene [H]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788778, Length=126, Percent_Identity=32.5396825396825, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: PF02311 AraC_binding; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35229; Mature: 35098

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTPFEPLALRAHRLFESRDLDETRERISRVMQPHALLPSGRVCGASHMDFVRLGGLGI
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHCCCCE
GTIAFGDAMRVQVDAVDGYYLLMFCLSGHADVRAMGRQLGVDAQTGVLCAPGERFDALLS
EHEEECCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHH
ADCEQFVLRIDAATVRTLTGDPRATLDPVLHVSDAALAAWRDQLMLVARSPDLLERARTN
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCC
PRVASQLEHLLIDLLIEGHPPSVLPAARHDPVPGFVRRAQEFVDAHYAQPLQLADIVRAA
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC
DVPERTLRDAFLQFRGTSPMQYLRAKRLEHARELLLGATPERRIADIALDCGFTHLGRFA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHH
LAYRERFGESPSDTLAGRS
HHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SPTPFEPLALRAHRLFESRDLDETRERISRVMQPHALLPSGRVCGASHMDFVRLGGLGI
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHCCCCE
GTIAFGDAMRVQVDAVDGYYLLMFCLSGHADVRAMGRQLGVDAQTGVLCAPGERFDALLS
EHEEECCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEECCCHHHHHHHH
ADCEQFVLRIDAATVRTLTGDPRATLDPVLHVSDAALAAWRDQLMLVARSPDLLERARTN
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCC
PRVASQLEHLLIDLLIEGHPPSVLPAARHDPVPGFVRRAQEFVDAHYAQPLQLADIVRAA
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC
DVPERTLRDAFLQFRGTSPMQYLRAKRLEHARELLLGATPERRIADIALDCGFTHLGRFA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHH
LAYRERFGESPSDTLAGRS
HHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8473862 [H]