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The map label for this gene is acd [H]

Identifier: 189352032

GI number: 189352032

Start: 47820

End: 49064

Strand: Direct

Name: acd [H]

Synonym: BMULJ_03249

Alternate gene names: 189352032

Gene position: 47820-49064 (Clockwise)

Preceding gene: 189352031

Following gene: 189352033

Centisome position: 1.93

GC content: 66.91

Gene sequence:

>1245_bases
ATGGACTTTGGCTACACCCCGAAAGTGGAAGAACTGCGCGAACGCGTGCGCGCATTCATGGACGCGCACATCGTGCCGCG
CATTCGTCAATGGAACGACGAAGTGCATGCGGGGCAGTATCCGGTGTCGTTCATGGAAGAGCTGAAGGCGCGCGCGAAGG
CCGAAGGGCTGTGGAACCTGTTCCTGCCGCATCTGAAGGACGACGAACCGGGCACGCGCCTGACGAACCTCGAGTACGCG
CCGCTCGCGGAAATCATGGGGCGAGTCGGCTGGGCATCCGAGGTATTCAACTGCAATGCGCCGGACACCGGCAACATGGA
GTTGCTGCACATGTTCGCGACGCCCGAGCAGCGCGAGCAATGGCTGCTGCCGCTGCTGCGCGGCGAGATCCGCTCGGCAT
TCGCGATGACGGAGCCCGACGTCGCGTCGTCCGATGCGACGAACATCACGACGCGCATCGTGCGCGAGGGCGACGACTAC
GTGATCAACGGCCGCAAGTGGTTCATCACGAACGCCGCGCATCCGAACTGCAAGATCTTCATCGTGATGGGCAAGACCGA
TCCCGCGGCCGAATCGCATCGCCAGCAGAGCATGATCCTCGTGCCGCGCGATACGCCGGGCGTGACGGTCGTACGCAACA
TCACGGTCGTCAATCACTACGCGCCGGAAGGGCATTGCGAGATCACGTTCGACAACGTGCGCGTGCCCGCGCGCAACCTG
CTCGGCGAAGAGGGCAGCGGCTTCGCGCTCGCGCAGGCGCGGCTCGGGCCGGGCCGCATCCATCACTGCATGCGCTCGAT
CGGCGCGGCCGAGCTCGCGCTCGAACTGATGATCGACCGCGCGCAGGCGCGCGAAGCGTTCGGCAAGCCGCTGAACCGGC
ACGGCACGGTCGGCGAGTGGATCGCGCGTTCGCGTATCGAGATCGACCAGGCGCGGCTGCTCGTGCTGAAGGCCGCGTGG
ATGATCGACAAGGTCGGCGCGAAGGCCGCGCGCAAGGAGATCTCGATGATCAAGGCGCTCGTGCCGACCGTCCATACGAA
CGTGTGCGACCGCGCGATGCAGCTGTTCGGCGCGGCCGGGCTGAGCCCCGACACGCCGCTCGCCGATCACTGGACGTGGG
GCCGCGCGCTGCGTTTCGCGGACGGTCCGGACGAAGTGCACCTGCAGTCGATCGCGCGGATGGAGATCAAGCAGGCGGTG
CCCGGCGCGAGCGCGCCGTACCTGACGCCGCCGCCGCGCGGCTGA

Upstream 100 bases:

>100_bases
GCGAAGGAAAACACCTATCTGACCGGGCAGGCCGTCGCCGTCGACGGCGGTGTCTCGGCCTTCTGAACCGAACGCAACAC
GGAATCTCGAGGAGTCGATC

Downstream 100 bases:

>100_bases
GCGTTGCAGGCGGCGCCGCGCACGACGGCGCCGCCGCGGGAGCGAACATGGACGAACGGGCGGCGCGCGCCGTAAGATGC
CGGCGAGGAGGCTTCGCGAT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MDFGYTPKVEELRERVRAFMDAHIVPRIRQWNDEVHAGQYPVSFMEELKARAKAEGLWNLFLPHLKDDEPGTRLTNLEYA
PLAEIMGRVGWASEVFNCNAPDTGNMELLHMFATPEQREQWLLPLLRGEIRSAFAMTEPDVASSDATNITTRIVREGDDY
VINGRKWFITNAAHPNCKIFIVMGKTDPAAESHRQQSMILVPRDTPGVTVVRNITVVNHYAPEGHCEITFDNVRVPARNL
LGEEGSGFALAQARLGPGRIHHCMRSIGAAELALELMIDRAQAREAFGKPLNRHGTVGEWIARSRIEIDQARLLVLKAAW
MIDKVGAKAARKEISMIKALVPTVHTNVCDRAMQLFGAAGLSPDTPLADHWTWGRALRFADGPDEVHLQSIARMEIKQAV
PGASAPYLTPPPRG

Sequences:

>Translated_414_residues
MDFGYTPKVEELRERVRAFMDAHIVPRIRQWNDEVHAGQYPVSFMEELKARAKAEGLWNLFLPHLKDDEPGTRLTNLEYA
PLAEIMGRVGWASEVFNCNAPDTGNMELLHMFATPEQREQWLLPLLRGEIRSAFAMTEPDVASSDATNITTRIVREGDDY
VINGRKWFITNAAHPNCKIFIVMGKTDPAAESHRQQSMILVPRDTPGVTVVRNITVVNHYAPEGHCEITFDNVRVPARNL
LGEEGSGFALAQARLGPGRIHHCMRSIGAAELALELMIDRAQAREAFGKPLNRHGTVGEWIARSRIEIDQARLLVLKAAW
MIDKVGAKAARKEISMIKALVPTVHTNVCDRAMQLFGAAGLSPDTPLADHWTWGRALRFADGPDEVHLQSIARMEIKQAV
PGASAPYLTPPPRG
>Mature_414_residues
MDFGYTPKVEELRERVRAFMDAHIVPRIRQWNDEVHAGQYPVSFMEELKARAKAEGLWNLFLPHLKDDEPGTRLTNLEYA
PLAEIMGRVGWASEVFNCNAPDTGNMELLHMFATPEQREQWLLPLLRGEIRSAFAMTEPDVASSDATNITTRIVREGDDY
VINGRKWFITNAAHPNCKIFIVMGKTDPAAESHRQQSMILVPRDTPGVTVVRNITVVNHYAPEGHCEITFDNVRVPARNL
LGEEGSGFALAQARLGPGRIHHCMRSIGAAELALELMIDRAQAREAFGKPLNRHGTVGEWIARSRIEIDQARLLVLKAAW
MIDKVGAKAARKEISMIKALVPTVHTNVCDRAMQLFGAAGLSPDTPLADHWTWGRALRFADGPDEVHLQSIARMEIKQAV
PGASAPYLTPPPRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=400, Percent_Identity=54.5, Blast_Score=418, Evalue=1e-117,
Organism=Homo sapiens, GI48976061, Length=400, Percent_Identity=54.5, Blast_Score=418, Evalue=1e-117,
Organism=Homo sapiens, GI38505218, Length=404, Percent_Identity=49.5049504950495, Blast_Score=387, Evalue=1e-108,
Organism=Homo sapiens, GI4501859, Length=384, Percent_Identity=27.34375, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI4557233, Length=351, Percent_Identity=29.3447293447293, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI4557231, Length=405, Percent_Identity=23.9506172839506, Blast_Score=128, Evalue=9e-30,
Organism=Homo sapiens, GI187960098, Length=405, Percent_Identity=23.9506172839506, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI7656849, Length=399, Percent_Identity=25.062656641604, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI21361497, Length=369, Percent_Identity=28.1842818428184, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI76496475, Length=376, Percent_Identity=27.6595744680851, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI4557235, Length=376, Percent_Identity=27.6595744680851, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI226958412, Length=391, Percent_Identity=23.7851662404092, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI226958414, Length=278, Percent_Identity=26.2589928057554, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4501857, Length=409, Percent_Identity=24.4498777506112, Blast_Score=99, Evalue=7e-21,
Organism=Escherichia coli, GI87081958, Length=405, Percent_Identity=28.641975308642, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1786223, Length=264, Percent_Identity=26.8939393939394, Blast_Score=101, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17562446, Length=402, Percent_Identity=52.2388059701493, Blast_Score=403, Evalue=1e-112,
Organism=Caenorhabditis elegans, GI17508101, Length=379, Percent_Identity=28.4960422163588, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17534899, Length=400, Percent_Identity=27.25, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17570075, Length=395, Percent_Identity=25.3164556962025, Blast_Score=124, Evalue=9e-29,
Organism=Caenorhabditis elegans, GI17569725, Length=402, Percent_Identity=24.6268656716418, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17506239, Length=283, Percent_Identity=30.3886925795053, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17533517, Length=395, Percent_Identity=26.3291139240506, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=281, Percent_Identity=27.0462633451957, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17551932, Length=391, Percent_Identity=25.0639386189258, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=324, Percent_Identity=28.0864197530864, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71990804, Length=214, Percent_Identity=32.7102803738318, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17505929, Length=397, Percent_Identity=23.1738035264484, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=239, Percent_Identity=29.7071129707113, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI32563615, Length=180, Percent_Identity=32.7777777777778, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71982178, Length=284, Percent_Identity=25.7042253521127, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI21356377, Length=328, Percent_Identity=30.1829268292683, Blast_Score=138, Evalue=8e-33,
Organism=Drosophila melanogaster, GI24646207, Length=388, Percent_Identity=27.5773195876289, Blast_Score=134, Evalue=8e-32,
Organism=Drosophila melanogaster, GI24660351, Length=392, Percent_Identity=26.7857142857143, Blast_Score=125, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24666513, Length=286, Percent_Identity=29.7202797202797, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI281363737, Length=357, Percent_Identity=27.1708683473389, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21355753, Length=269, Percent_Identity=26.3940520446097, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 46167; Mature: 46167

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFGYTPKVEELRERVRAFMDAHIVPRIRQWNDEVHAGQYPVSFMEELKARAKAEGLWNL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
FLPHLKDDEPGTRLTNLEYAPLAEIMGRVGWASEVFNCNAPDTGNMELLHMFATPEQREQ
HCCCCCCCCCCCEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEECCCHHHHH
WLLPLLRGEIRSAFAMTEPDVASSDATNITTRIVREGDDYVINGRKWFITNAAHPNCKIF
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEECCCCEEECCEEEEEECCCCCCEEEE
IVMGKTDPAAESHRQQSMILVPRDTPGVTVVRNITVVNHYAPEGHCEITFDNVRVPARNL
EEECCCCCCHHHHCCCCEEEEECCCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCHHHH
LGEEGSGFALAQARLGPGRIHHCMRSIGAAELALELMIDRAQAREAFGKPLNRHGTVGEW
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
IARSRIEIDQARLLVLKAAWMIDKVGAKAARKEISMIKALVPTVHTNVCDRAMQLFGAAG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSPDTPLADHWTWGRALRFADGPDEVHLQSIARMEIKQAVPGASAPYLTPPPRG
CCCCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDFGYTPKVEELRERVRAFMDAHIVPRIRQWNDEVHAGQYPVSFMEELKARAKAEGLWNL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
FLPHLKDDEPGTRLTNLEYAPLAEIMGRVGWASEVFNCNAPDTGNMELLHMFATPEQREQ
HCCCCCCCCCCCEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEECCCHHHHH
WLLPLLRGEIRSAFAMTEPDVASSDATNITTRIVREGDDYVINGRKWFITNAAHPNCKIF
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEECCCCEEECCEEEEEECCCCCCEEEE
IVMGKTDPAAESHRQQSMILVPRDTPGVTVVRNITVVNHYAPEGHCEITFDNVRVPARNL
EEECCCCCCHHHHCCCCEEEEECCCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCHHHH
LGEEGSGFALAQARLGPGRIHHCMRSIGAAELALELMIDRAQAREAFGKPLNRHGTVGEW
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
IARSRIEIDQARLLVLKAAWMIDKVGAKAARKEISMIKALVPTVHTNVCDRAMQLFGAAG
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSPDTPLADHWTWGRALRFADGPDEVHLQSIARMEIKQAVPGASAPYLTPPPRG
CCCCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]