| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184767
Identifier: 189184767
GI number: 189184767
Start: 1894494
End: 1895375
Strand: Direct
Name: 189184767
Synonym: OTT_1860
Alternate gene names: NA
Gene position: 1894494-1895375 (Clockwise)
Preceding gene: 189184766
Following gene: 189184775
Centisome position: 94.3
GC content: 32.09
Gene sequence:
>882_bases TTGTTAAATAGTACAGCATTTATGTTACTACAGAAATATGAGATCGAATTTTCTAATTTTTGTACTATTTTAAGTGGATC TGGAACTAAGGCCAAAGAAGTCACTCAAAAAGTATTAGGGATATTATCAGACCAACAACTAGATGCTTCAGGTAAGAAAC AATTTTTTAAAAATATTTCAAAATTTGCACGAAGTGGAATTAATACTCCTTTCATCTTCAAAAAATTTTTGTCATCATCA TTATCATTAGATGAAACCGTACAACAAACAGAAGAAGATACTCATTATACTGATTGGCAGTTTGAAGAACAAGATGATAA TATACAAGCATTTCCAAGTACTTCGACTGCAGCGTTAGGTGCTACTGATATTGAGATGCAAGAATCTGTTGCTGTATCTT CATTAAATTTAGAAGAAAATTTTCAGTTAGCTATGGAGTTTATAATGCAAGATCTTGAATCTTCTTCTAGCACTGCAACA GTTATGAGTCATGATATTAACATGACACAAGAAGAATATATTGATAATATTATTCCACCTTTGGAGCAAGAAAGTAGTAA TATATTACTAGATTCTGATTATTATAACGCTTATGAGGAAGGTATACAATCTGGACTAACATGTAGTTATGCGAGTATCT ATGCTGCTATTGTTGCTAAGCACATTGCTAATGGCACATCAGAACATTCTGCCAAAAACTTTGCTCAAAGCTATATTGAA GGTTTTAGTTCGTCTATTCAAAATCATCAAAAAGGAGACTGTTATGCTCACAGCTACGCTGAAGCTTATGCAGATTGTAT AAGCAGTGGTAAACACAAATGTTATGCTCAAAACTATGCTGAAATTTTTGCTGAAACTGTAGCAAGTGGAAAAAAATTAT GA
Upstream 100 bases:
>100_bases ACAAGAATTAGAGCGCAAGGGAATTCCTTTTTCTAATCTTAGTAATATCTTAAATGGAGCAGGATCTAATGGTGCGAAAG CTTTAAAAGAGTTATTAAGA
Downstream 100 bases:
>100_bases TTATGCTCGAAACTATGCTGAAGCTAATACTGATTTTATGTTTCTTGAAGAAGAAGAGGCAACTTCAGGACATATTTTTG AGCAAATGAGTGCTAACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MLNSTAFMLLQKYEIEFSNFCTILSGSGTKAKEVTQKVLGILSDQQLDASGKKQFFKNISKFARSGINTPFIFKKFLSSS LSLDETVQQTEEDTHYTDWQFEEQDDNIQAFPSTSTAALGATDIEMQESVAVSSLNLEENFQLAMEFIMQDLESSSSTAT VMSHDINMTQEEYIDNIIPPLEQESSNILLDSDYYNAYEEGIQSGLTCSYASIYAAIVAKHIANGTSEHSAKNFAQSYIE GFSSSIQNHQKGDCYAHSYAEAYADCISSGKHKCYAQNYAEIFAETVASGKKL
Sequences:
>Translated_293_residues MLNSTAFMLLQKYEIEFSNFCTILSGSGTKAKEVTQKVLGILSDQQLDASGKKQFFKNISKFARSGINTPFIFKKFLSSS LSLDETVQQTEEDTHYTDWQFEEQDDNIQAFPSTSTAALGATDIEMQESVAVSSLNLEENFQLAMEFIMQDLESSSSTAT VMSHDINMTQEEYIDNIIPPLEQESSNILLDSDYYNAYEEGIQSGLTCSYASIYAAIVAKHIANGTSEHSAKNFAQSYIE GFSSSIQNHQKGDCYAHSYAEAYADCISSGKHKCYAQNYAEIFAETVASGKKL >Mature_293_residues MLNSTAFMLLQKYEIEFSNFCTILSGSGTKAKEVTQKVLGILSDQQLDASGKKQFFKNISKFARSGINTPFIFKKFLSSS LSLDETVQQTEEDTHYTDWQFEEQDDNIQAFPSTSTAALGATDIEMQESVAVSSLNLEENFQLAMEFIMQDLESSSSTAT VMSHDINMTQEEYIDNIIPPLEQESSNILLDSDYYNAYEEGIQSGLTCSYASIYAAIVAKHIANGTSEHSAKNFAQSYIE GFSSSIQNHQKGDCYAHSYAEAYADCISSGKHKCYAQNYAEIFAETVASGKKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32525; Mature: 32525
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNSTAFMLLQKYEIEFSNFCTILSGSGTKAKEVTQKVLGILSDQQLDASGKKQFFKNIS CCCHHHHHHHHHHHCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH KFARSGINTPFIFKKFLSSSLSLDETVQQTEEDTHYTDWQFEEQDDNIQAFPSTSTAALG HHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEECCCCCCHHCC ATDIEMQESVAVSSLNLEENFQLAMEFIMQDLESSSSTATVMSHDINMTQEEYIDNIIPP CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCHHHHHHHCCCC LEQESSNILLDSDYYNAYEEGIQSGLTCSYASIYAAIVAKHIANGTSEHSAKNFAQSYIE CCCCCCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GFSSSIQNHQKGDCYAHSYAEAYADCISSGKHKCYAQNYAEIFAETVASGKKL HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLNSTAFMLLQKYEIEFSNFCTILSGSGTKAKEVTQKVLGILSDQQLDASGKKQFFKNIS CCCHHHHHHHHHHHCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH KFARSGINTPFIFKKFLSSSLSLDETVQQTEEDTHYTDWQFEEQDDNIQAFPSTSTAALG HHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEECCCCCCHHCC ATDIEMQESVAVSSLNLEENFQLAMEFIMQDLESSSSTATVMSHDINMTQEEYIDNIIPP CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCCHHHHHHHCCCC LEQESSNILLDSDYYNAYEEGIQSGLTCSYASIYAAIVAKHIANGTSEHSAKNFAQSYIE CCCCCCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GFSSSIQNHQKGDCYAHSYAEAYADCISSGKHKCYAQNYAEIFAETVASGKKL HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA