Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is dam [H]

Identifier: 189184757

GI number: 189184757

Start: 1881822

End: 1882634

Strand: Direct

Name: dam [H]

Synonym: OTT_1850

Alternate gene names: 189184757

Gene position: 1881822-1882634 (Clockwise)

Preceding gene: 189184753

Following gene: 189184765

Centisome position: 93.67

GC content: 30.75

Gene sequence:

>813_bases
GTGTCAATAGCAATTTCTAATGAACCAAAGCCTTTTCTTCACTGGGTTGGAGGTAAAAGGAGAATTGTTAATAAATTAAT
AAAGCATCTTCCTTCAGGGCCATACTATAATTACTATGAACCATTCCTTGGTGGAGGTGCTTTATTTTTTCAAGTTAGGC
ATCTGTTTAAACAATGTTTTTTGTCTGATATTAATCTTGACTTAATTACTAGTTATCACGCTGTAAAAAAGAATCCAAAT
GAGGTCAATAGATTACTAAATCTATATCACAAAAACCATTCTGAAAATCACTACTATAAAATAAGAGACAATTATTATAG
TAATGATCCTAACGATATCACGGCAAAATTTATATATCTTAATAAATATTCCTTTAGGGGAATTTATAGGCTAAACAGAG
ATGGTACATCCGCTCAAACATTTTCTGATAAGCGATATCTTAAGCTTCATATTTGCTCTAAAATAAATAAATGTAGCAAA
CTTTTAACTGGCACATCCATTTGTGCAATGGATTTTTCGTTTATAGAACCTAAAAAAGGTGACTTCATTTATCTTGATCC
GCCTTACCACCAATCTGGAGAACGGTTCTACACTAGAGTCCCATTTGATGAAAAAGAGCAAATCAGATTACGAGATTTTG
TATATGAACTAACCAATAAAGGTATTAAAATTATGCTTTCAAATAATAATACTGCATTCATTAGAGACATATACAAAGAC
TTTTTCATCACTCATATTCCAGTCACATACTCAATCAATCAACAACGAAACACTGTTAATGAGCTAATCATTACTAACTA
TAAAACTTATTAG

Upstream 100 bases:

>100_bases
AAGATTTATAAAAAAAGCTCTGCAGCAGTTATTATTACTGGCTTTAAGGCTTATTTTCTGCTATAATTCATAGTAGAGAT
TTAATTAATCAAAAATTCTT

Downstream 100 bases:

>100_bases
TTATTAGAAATGAAACCGCGATCCAAAACGTATATGAATAGGAAGTGGGATATAGTTAGCTATTGTGCTACATTCAATGT
CTAAATATATATCTTTTGAT

Product: N6 adenine-specific DNA-methyltransferase

Products: NA

Alternate protein names: DNA adenine methyltransferase; Deoxyadenosyl-methyltransferase; M.TpaI [H]

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSIAISNEPKPFLHWVGGKRRIVNKLIKHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPN
EVNRLLNLYHKNHSENHYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSKINKCSK
LLTGTSICAMDFSFIEPKKGDFIYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELTNKGIKIMLSNNNTAFIRDIYKD
FFITHIPVTYSINQQRNTVNELIITNYKTY

Sequences:

>Translated_270_residues
MSIAISNEPKPFLHWVGGKRRIVNKLIKHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPN
EVNRLLNLYHKNHSENHYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSKINKCSK
LLTGTSICAMDFSFIEPKKGDFIYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELTNKGIKIMLSNNNTAFIRDIYKD
FFITHIPVTYSINQQRNTVNELIITNYKTY
>Mature_269_residues
SIAISNEPKPFLHWVGGKRRIVNKLIKHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPNE
VNRLLNLYHKNHSENHYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSKINKCSKL
LTGTSICAMDFSFIEPKKGDFIYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELTNKGIKIMLSNNNTAFIRDIYKDF
FITHIPVTYSINQQRNTVNELIITNYKTY

Specific function: Methylates DNA within the sequence GATC. Directly involved in methyl-directed DNA mismatch repair, DNA replication, and gene expression [H]

COG id: COG0338

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789789, Length=268, Percent_Identity=29.1044776119403, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023095
- InterPro:   IPR002052
- InterPro:   IPR012327 [H]

Pfam domain/function: PF02086 MethyltransfD12 [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 32017; Mature: 31886

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAISNEPKPFLHWVGGKRRIVNKLIKHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCF
CEEEECCCCCHHEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH
LSDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENHYYKIRDNYYSNDPNDITAKFIYL
HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEEE
NKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSKINKCSKLLTGTSICAMDFSFIEPKKG
EEECCCEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEECCHHCCCCCC
DFIYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELTNKGIKIMLSNNNTAFIRDIYKD
CEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEHHHHHHHH
FFITHIPVTYSINQQRNTVNELIITNYKTY
HHEEECEEEEEECCHHHHHHHHEEECCCCC
>Mature Secondary Structure 
SIAISNEPKPFLHWVGGKRRIVNKLIKHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCF
EEEECCCCCHHEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH
LSDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENHYYKIRDNYYSNDPNDITAKFIYL
HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEEE
NKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSKINKCSKLLTGTSICAMDFSFIEPKKG
EEECCCEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEECCHHCCCCCC
DFIYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELTNKGIKIMLSNNNTAFIRDIYKD
CEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEHHHHHHHH
FFITHIPVTYSINQQRNTVNELIITNYKTY
HHEEECEEEEEECCHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9345771; 9665876 [H]