Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184753

Identifier: 189184753

GI number: 189184753

Start: 1878673

End: 1879179

Strand: Direct

Name: 189184753

Synonym: OTT_1846

Alternate gene names: NA

Gene position: 1878673-1879179 (Clockwise)

Preceding gene: 189184752

Following gene: 189184757

Centisome position: 93.51

GC content: 29.59

Gene sequence:

>507_bases
GTGTTAAGGAATGAATTTATCGAGAAGGTAAAGCAAATTTCTAAAGAAAATCTAGTATTTATTGATGAGTCAGGAATAGA
GGATAATGCTTGTAGAGAATATGGATGGAGTATAAAAGGTACTAGATGTTATGGCAATAAAGCTTATCAACATAAATCCA
GGGTCAGTATGATAGCGGGGCTTTGTAATAATCAAATTATAGCACCAGTAATATTTGAAGGAAATTGTAATAAAGAAATA
TTTACAACTTATGTAGAAACTATATTAATCAAAGAATTGCACCCTGGACAAATAGTAATTATGGATAATATCAACTTCCA
TAAGAATAATACAATTAAAGTATTAATAGAATCGGTTGGCTGCAGTATTCTATTCTTACCTACATATAGTCCAGATTTAA
ATCCTATAGAACATTATTGGTTTAAGATTAAGAACGAAATAAGAAAAGTTATTGGTCAATTCAAAGATATTAGCATTGCT
GTAGCACACGTAATGCAGTTTATCTGA

Upstream 100 bases:

>100_bases
ATACTAGGTAATAGATTACAAAGAACTAGAATAAATTATTATAGAAAACTACTAGGATACACTTATAAAAAAAACTCATT
TTCATCCCAAAAGGGATATT

Downstream 100 bases:

>100_bases
TTGTACCTATTTCCTACGTTATTGCTATACTTAGCAAGAGGTATAAATTCTTGCTGAGTTTCAATGACGATTTTTTGTCT
TTTTTCATAAGGTTTTATGT

Product: transposase

Products: NA

Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Transposase Family Protein; ISRin2 Transposase OrfB; Degenerate Transposase; ISHde6 Transposase OrfB; ISSoc4 Transposase OrfAB; Transposase And Inactivated Derivative; Transposase IS; ISHde1 Transposase OrfB; Transposase Fragment; ISHde5 Transposase OrfA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKEI
FTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVGCSILFLPTYSPDLNPIEHYWFKIKNEIRKVIGQFKDISIA
VAHVMQFI

Sequences:

>Translated_168_residues
MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKEI
FTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVGCSILFLPTYSPDLNPIEHYWFKIKNEIRKVIGQFKDISIA
VAHVMQFI
>Mature_168_residues
MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKEI
FTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVGCSILFLPTYSPDLNPIEHYWFKIKNEIRKVIGQFKDISIA
VAHVMQFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19370; Mature: 19370

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAG
CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH
LCNNQIIAPVIFEGNCNKEIFTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVG
HHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCC
CSILFLPTYSPDLNPIEHYWFKIKNEIRKVIGQFKDISIAVAHVMQFI
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAG
CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH
LCNNQIIAPVIFEGNCNKEIFTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVG
HHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCC
CSILFLPTYSPDLNPIEHYWFKIKNEIRKVIGQFKDISIAVAHVMQFI
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA