| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184689
Identifier: 189184689
GI number: 189184689
Start: 1808376
End: 1808585
Strand: Direct
Name: 189184689
Synonym: OTT_1782
Alternate gene names: NA
Gene position: 1808376-1808585 (Clockwise)
Preceding gene: 189184688
Following gene: 189184695
Centisome position: 90.01
GC content: 29.52
Gene sequence:
>210_bases ATGTTAGGGCATAGTCGTATTTCAACAACAGCTAAAATTTATACTAAAATTAGTGTAGATAAGGTAAAAGCAGCTACAAA TAAAGTTGTAAACAATATATTAACAAGTGATAATGCTAATACTGAACTAGACAAGATAATACCTGAAATCTTAGCATCAT TAGGTCGCCAAGAAGAAAGACAGATAATAAACAGCTTATCTGAGAAATAA
Upstream 100 bases:
>100_bases CAAAAAATCTGGAATACCGAATGTAACAATACATGATCTTAGAAGAACGTTTGCAACTTGGTCGATAAATAATGGAGAAG AACTACAGATAATAGCTGAA
Downstream 100 bases:
>100_bases GGCTTGATATATTAGATAGATTTTGTAAATTTTTGAAAATCACAGTAGTAGAATGAGAAATCTCATTCTTCAATTGAGGC TGAAGGTGATTATGCAAAAT
Product: putative integrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MLGHSRISTTAKIYTKISVDKVKAATNKVVNNILTSDNANTELDKIIPEILASLGRQEERQIINSLSEK
Sequences:
>Translated_69_residues MLGHSRISTTAKIYTKISVDKVKAATNKVVNNILTSDNANTELDKIIPEILASLGRQEERQIINSLSEK >Mature_69_residues MLGHSRISTTAKIYTKISVDKVKAATNKVVNNILTSDNANTELDKIIPEILASLGRQEERQIINSLSEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7624; Mature: 7624
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGHSRISTTAKIYTKISVDKVKAATNKVVNNILTSDNANTELDKIIPEILASLGRQEER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHH QIINSLSEK HHHHHHCCC >Mature Secondary Structure MLGHSRISTTAKIYTKISVDKVKAATNKVVNNILTSDNANTELDKIIPEILASLGRQEER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHH QIINSLSEK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA