Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is sam [H]

Identifier: 189184695

GI number: 189184695

Start: 1812167

End: 1813039

Strand: Direct

Name: sam [H]

Synonym: OTT_1788

Alternate gene names: 189184695

Gene position: 1812167-1813039 (Clockwise)

Preceding gene: 189184689

Following gene: 189184696

Centisome position: 90.2

GC content: 27.72

Gene sequence:

>873_bases
ATGAATTCTGACTTAAACAACTATTTGAAAGGAATTCTTTGGTTTTTTCTAGCATTATTATGTAGTGTGCTAAATGATAT
AATATCCAAAAAAATAGGCTTAAGTCTTAGCGCTGCTCAAATATCATTTCTGAGATCTTTTGGAAGCACTTTAGCACTAA
TACCATTTATATTGTTTACTGGTATAAAAACTCTTAAGAGCAAAACATTAAAAATACATTTTCTAAGAGGAATATTATTA
TTTTGCTCTCTATCAACATGGGTATATGGGTTAACAATCACTTCTGTAGCATCAGTAACAATTATATCTTTTTCTATTCC
ATTAATTACATTAATTTTAGCTAATTTAGTACTCAACGAAGATGTTAAATGGTATAGATGGGTTGCAACTATATTAGGAT
TTATAGGAGTAATAATTGCAATACCAACAACTAAAACAATATTTGATATTAGAATTTTAGTGCTGTTCTTATCAGCATTT
ATTTTTGCTATACTTGATATTATTAATAAAAAATTTGTTAATAGCGAATCAATGCTATCAATGTTATTTTATTCTGCTTT
TTTCACGACTATTGTGGCATTGCCATTTGCATATTACTCATGGAAACCTCTAAACTATACCTATTGGCCTTTAATTTTTA
TTTTAGGTTGTAGCGCCAATTTAATTCTCTATTTTCTTCTTAAAGCTTTTAGTTTAGTAGATAGTAGCGCTGTTGCTCCT
TACCGCTACATAGAACTAATACTTTCTGCTATAGCTGGATTTTTATATTTTAATGAAGCAGTAAGCTATTATATTTGGTT
TGGAGGGGCAATTTTAATTTTTTCAACTACTTTCATATTTTATACTGAAAAAGCTAATATCAATAAACATTAA

Upstream 100 bases:

>100_bases
TTTTTAGTATATTAATACAAAGATGCTACCTTGTAAAAGCTAATTTTGATATATTAAAACTTAACAAGTAAAACATACAT
GCATTTGCAACTTAAGAATT

Downstream 100 bases:

>100_bases
AGATTATTAATTTTTAAATGCTAAACAAAAATTACAAAATCATTCTAAGTAGCTGTATTGCTAATATCTTCGAGTGGTAT
GATTATACGTTATTCATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNSDLNNYLKGILWFFLALLCSVLNDIISKKIGLSLSAAQISFLRSFGSTLALIPFILFTGIKTLKSKTLKIHFLRGILL
FCSLSTWVYGLTITSVASVTIISFSIPLITLILANLVLNEDVKWYRWVATILGFIGVIIAIPTTKTIFDIRILVLFLSAF
IFAILDIINKKFVNSESMLSMLFYSAFFTTIVALPFAYYSWKPLNYTYWPLIFILGCSANLILYFLLKAFSLVDSSAVAP
YRYIELILSAIAGFLYFNEAVSYYIWFGGAILIFSTTFIFYTEKANINKH

Sequences:

>Translated_290_residues
MNSDLNNYLKGILWFFLALLCSVLNDIISKKIGLSLSAAQISFLRSFGSTLALIPFILFTGIKTLKSKTLKIHFLRGILL
FCSLSTWVYGLTITSVASVTIISFSIPLITLILANLVLNEDVKWYRWVATILGFIGVIIAIPTTKTIFDIRILVLFLSAF
IFAILDIINKKFVNSESMLSMLFYSAFFTTIVALPFAYYSWKPLNYTYWPLIFILGCSANLILYFLLKAFSLVDSSAVAP
YRYIELILSAIAGFLYFNEAVSYYIWFGGAILIFSTTFIFYTEKANINKH
>Mature_290_residues
MNSDLNNYLKGILWFFLALLCSVLNDIISKKIGLSLSAAQISFLRSFGSTLALIPFILFTGIKTLKSKTLKIHFLRGILL
FCSLSTWVYGLTITSVASVTIISFSIPLITLILANLVLNEDVKWYRWVATILGFIGVIIAIPTTKTIFDIRILVLFLSAF
IFAILDIINKKFVNSESMLSMLFYSAFFTTIVALPFAYYSWKPLNYTYWPLIFILGCSANLILYFLLKAFSLVDSSAVAP
YRYIELILSAIAGFLYFNEAVSYYIWFGGAILIFSTTFIFYTEKANINKH

Specific function: Transports S-adenosylmethionine [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32813; Mature: 32813

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSDLNNYLKGILWFFLALLCSVLNDIISKKIGLSLSAAQISFLRSFGSTLALIPFILFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GIKTLKSKTLKIHFLRGILLFCSLSTWVYGLTITSVASVTIISFSIPLITLILANLVLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DVKWYRWVATILGFIGVIIAIPTTKTIFDIRILVLFLSAFIFAILDIINKKFVNSESMLS
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MLFYSAFFTTIVALPFAYYSWKPLNYTYWPLIFILGCSANLILYFLLKAFSLVDSSAVAP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCH
YRYIELILSAIAGFLYFNEAVSYYIWFGGAILIFSTTFIFYTEKANINKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure
MNSDLNNYLKGILWFFLALLCSVLNDIISKKIGLSLSAAQISFLRSFGSTLALIPFILFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GIKTLKSKTLKIHFLRGILLFCSLSTWVYGLTITSVASVTIISFSIPLITLILANLVLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DVKWYRWVATILGFIGVIIAIPTTKTIFDIRILVLFLSAFIFAILDIINKKFVNSESMLS
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MLFYSAFFTTIVALPFAYYSWKPLNYTYWPLIFILGCSANLILYFLLKAFSLVDSSAVAP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCH
YRYIELILSAIAGFLYFNEAVSYYIWFGGAILIFSTTFIFYTEKANINKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA