| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184523
Identifier: 189184523
GI number: 189184523
Start: 1644385
End: 1645029
Strand: Direct
Name: 189184523
Synonym: OTT_1616
Alternate gene names: NA
Gene position: 1644385-1645029 (Clockwise)
Preceding gene: 189184520
Following gene: 189184524
Centisome position: 81.85
GC content: 27.29
Gene sequence:
>645_bases ATGCAGATTTCATGTCCTCAATGTAATACTGTTTTTGCATTGCCTAATAATAAAAATTTAAGTTTTAAAAATATAAGAAA AATCAAATGCTCTAAGTGTCAACATATTTGGATTGGAAAGTTACAGGATTTAATATCTGTGCCAATGACTACTGCGAGTT TTTGTGTAACAGATTATAGTTATCAATTAGGTAACAACATATCCTCTTTATTAAATAGAGGACAATATACAGTATCAATA TCTAGATATTCAGTAATACTGCCGTTCATATTAGCAAGTTTAATTTCACTATTATTATTTTTAACAGTAAAGTATAATTC AGCAGCACAAGATATAATTTTAGGAGAAAAGAAGCACATTTCATTACATAGAGTTACATCAACATATATTCCTGAAACTA ATCATAGAGTAATACAGTACATACTGTTTAACAATTCATCAATAGCTGTTCACCTTCCAGTTATAAAAATATGCACATAT GACCAAAATAAAAAACTGATAAATTATCATCTATTTAGTAATGAGGAAATAATATTGCCAGCTAAGACTTATGCACTTGT TAAAACAAAGTTTCAGAATGATAACATTCAACTCAGCAGTTTCAGTATAAGTTTGGGAAATAATTCGTTATTTATGATTA ACTAA
Upstream 100 bases:
>100_bases TATATTTACTCTGTATTTCAAAAAACCTTTGAACAACCTTAATCTTACATATAGAATATAGATAGATAACTTGATAGCGC AATAAAAATTTGAAACATAA
Downstream 100 bases:
>100_bases CTGATGTTATATGATAAAATATTGAAATAGTGTCATTGCAACAAAACAAGAGTACAAACTAACTCTGAAAAAATTTTTAA ATTGTTGGTGAAGTATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MQISCPQCNTVFALPNNKNLSFKNIRKIKCSKCQHIWIGKLQDLISVPMTTASFCVTDYSYQLGNNISSLLNRGQYTVSI SRYSVILPFILASLISLLLFLTVKYNSAAQDIILGEKKHISLHRVTSTYIPETNHRVIQYILFNNSSIAVHLPVIKICTY DQNKKLINYHLFSNEEIILPAKTYALVKTKFQNDNIQLSSFSISLGNNSLFMIN
Sequences:
>Translated_214_residues MQISCPQCNTVFALPNNKNLSFKNIRKIKCSKCQHIWIGKLQDLISVPMTTASFCVTDYSYQLGNNISSLLNRGQYTVSI SRYSVILPFILASLISLLLFLTVKYNSAAQDIILGEKKHISLHRVTSTYIPETNHRVIQYILFNNSSIAVHLPVIKICTY DQNKKLINYHLFSNEEIILPAKTYALVKTKFQNDNIQLSSFSISLGNNSLFMIN >Mature_214_residues MQISCPQCNTVFALPNNKNLSFKNIRKIKCSKCQHIWIGKLQDLISVPMTTASFCVTDYSYQLGNNISSLLNRGQYTVSI SRYSVILPFILASLISLLLFLTVKYNSAAQDIILGEKKHISLHRVTSTYIPETNHRVIQYILFNNSSIAVHLPVIKICTY DQNKKLINYHLFSNEEIILPAKTYALVKTKFQNDNIQLSSFSISLGNNSLFMIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24329; Mature: 24329
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQISCPQCNTVFALPNNKNLSFKNIRKIKCSKCQHIWIGKLQDLISVPMTTASFCVTDYS CCCCCCCCCEEEECCCCCCCCHHHHHEEECCCCCEEHHHHHHHHHHCCCCCCEEEEECCC YQLGNNISSLLNRGQYTVSISRYSVILPFILASLISLLLFLTVKYNSAAQDIILGEKKHI HHHCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEECCCCCE SLHRVTSTYIPETNHRVIQYILFNNSSIAVHLPVIKICTYDQNKKLINYHLFSNEEIILP EEEEEEEECCCCCCCEEEEEEEECCCEEEEEEEEEEEEEECCCCEEEEEEEECCCEEEEE AKTYALVKTKFQNDNIQLSSFSISLGNNSLFMIN CCEEEEEEEEECCCCEEEEEEEEEECCCEEEEEC >Mature Secondary Structure MQISCPQCNTVFALPNNKNLSFKNIRKIKCSKCQHIWIGKLQDLISVPMTTASFCVTDYS CCCCCCCCCEEEECCCCCCCCHHHHHEEECCCCCEEHHHHHHHHHHCCCCCCEEEEECCC YQLGNNISSLLNRGQYTVSISRYSVILPFILASLISLLLFLTVKYNSAAQDIILGEKKHI HHHCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEECCCCCE SLHRVTSTYIPETNHRVIQYILFNNSSIAVHLPVIKICTYDQNKKLINYHLFSNEEIILP EEEEEEEECCCCCCCEEEEEEEECCCEEEEEEEEEEEEEECCCCEEEEEEEECCCEEEEE AKTYALVKTKFQNDNIQLSSFSISLGNNSLFMIN CCEEEEEEEEECCCCEEEEEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA