| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is 189184510
Identifier: 189184510
GI number: 189184510
Start: 1635195
End: 1636010
Strand: Direct
Name: 189184510
Synonym: OTT_1603
Alternate gene names: NA
Gene position: 1635195-1636010 (Clockwise)
Preceding gene: 189184509
Following gene: 189184512
Centisome position: 81.39
GC content: 36.03
Gene sequence:
>816_bases ATGAATTTAATTAGCATAAATGAATCAGAATTAAGAATGTTAGAAGAGGCAGAGAAAGTAATATCTTGTCTTAATCCAAT ATTGGAGGATATATTACCTTTTACAGATGAAAGTGATGATCTTAAAACCCTGCAAGCTGATCTAAGAGGTATACTTGGTC AATTAAAACAAGATTTGGAGCAAGTCAAAAACAGAGGAGCATGGCATCATTTTGTTCAAGCGTTGGAAAATATTTTGGCA ATATTTAATGAGATGTTCACTGGCAACAATATGCCTCATGATCAAGGAGTCGTCAAGGCGATACAGGATCTTAGAAATGG TACAGACTTGGTAAAGGTATGCGAGGAACAAGATCGTATAGTAGATAGAGGAATAAGAATGCAGCTCATTGTACAGTCAC TAGTTAGTAATATGAAAACAGAACCATCTGAAGAACTCAAGAAAGCGAAAAAACTTCTAGATGAGGCAGTATCAAATCTT CAGTTAGAGCGCAAGGAAGCAGAAAGCAGAAAGCAGCCATTTGAATATTTGTTCCAAAAGCTTGGATATCTTCGTTCTTT CATAGTAGAGAGTAAGATGACATCAGATCAAAAAAGGCATTTATCTCGAGCCGCGCTATCTTCGTTACCTGAATTAAAAA TGTATCAGACGGACTGTTATCAGGAAGCATATGAGAATTATATGTTTCGCATGAGAGAAGAATCAAAAGAGTATGAAAAT ATAAAGAGTAATAATGCTTCTTCTTATGCAGAAAAGCTTCTTTCTCAAAGAGAGACTTCCTCACAACGTAAGGGACAAGG AGGGAGGAGTACATAA
Upstream 100 bases:
>100_bases CATTTACTTAAACCAACTCTTTAAGTAAAATGACTATAGCATAGTTGTTTAGCTATAAATTAGCTTTTTTGTTAACATAA AAATATAAGGAGTTAATTTC
Downstream 100 bases:
>100_bases GGCTTAACGATCTAGCATTTTGTCATTTAAAAGCTTTACGTAGGTCTAAATTAACCAGTATTAACCAGTTCTAGAGATTT TACTAGCACCATGTACAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNLISINESELRMLEEAEKVISCLNPILEDILPFTDESDDLKTLQADLRGILGQLKQDLEQVKNRGAWHHFVQALENILA IFNEMFTGNNMPHDQGVVKAIQDLRNGTDLVKVCEEQDRIVDRGIRMQLIVQSLVSNMKTEPSEELKKAKKLLDEAVSNL QLERKEAESRKQPFEYLFQKLGYLRSFIVESKMTSDQKRHLSRAALSSLPELKMYQTDCYQEAYENYMFRMREESKEYEN IKSNNASSYAEKLLSQRETSSQRKGQGGRST
Sequences:
>Translated_271_residues MNLISINESELRMLEEAEKVISCLNPILEDILPFTDESDDLKTLQADLRGILGQLKQDLEQVKNRGAWHHFVQALENILA IFNEMFTGNNMPHDQGVVKAIQDLRNGTDLVKVCEEQDRIVDRGIRMQLIVQSLVSNMKTEPSEELKKAKKLLDEAVSNL QLERKEAESRKQPFEYLFQKLGYLRSFIVESKMTSDQKRHLSRAALSSLPELKMYQTDCYQEAYENYMFRMREESKEYEN IKSNNASSYAEKLLSQRETSSQRKGQGGRST >Mature_271_residues MNLISINESELRMLEEAEKVISCLNPILEDILPFTDESDDLKTLQADLRGILGQLKQDLEQVKNRGAWHHFVQALENILA IFNEMFTGNNMPHDQGVVKAIQDLRNGTDLVKVCEEQDRIVDRGIRMQLIVQSLVSNMKTEPSEELKKAKKLLDEAVSNL QLERKEAESRKQPFEYLFQKLGYLRSFIVESKMTSDQKRHLSRAALSSLPELKMYQTDCYQEAYENYMFRMREESKEYEN IKSNNASSYAEKLLSQRETSSQRKGQGGRST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31348; Mature: 31348
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLISINESELRMLEEAEKVISCLNPILEDILPFTDESDDLKTLQADLRGILGQLKQDLE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVKNRGAWHHFVQALENILAIFNEMFTGNNMPHDQGVVKAIQDLRNGTDLVKVCEEQDRI HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH VDRGIRMQLIVQSLVSNMKTEPSEELKKAKKLLDEAVSNLQLERKEAESRKQPFEYLFQK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LGYLRSFIVESKMTSDQKRHLSRAALSSLPELKMYQTDCYQEAYENYMFRMREESKEYEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKSNNASSYAEKLLSQRETSSQRKGQGGRST HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNLISINESELRMLEEAEKVISCLNPILEDILPFTDESDDLKTLQADLRGILGQLKQDLE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVKNRGAWHHFVQALENILAIFNEMFTGNNMPHDQGVVKAIQDLRNGTDLVKVCEEQDRI HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH VDRGIRMQLIVQSLVSNMKTEPSEELKKAKKLLDEAVSNLQLERKEAESRKQPFEYLFQK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LGYLRSFIVESKMTSDQKRHLSRAALSSLPELKMYQTDCYQEAYENYMFRMREESKEYEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKSNNASSYAEKLLSQRETSSQRKGQGGRST HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA