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The map label for this gene is traB [C]

Identifier: 189184509

GI number: 189184509

Start: 1633818

End: 1634924

Strand: Direct

Name: traB [C]

Synonym: OTT_1602

Alternate gene names: 189184509

Gene position: 1633818-1634924 (Clockwise)

Preceding gene: 189184508

Following gene: 189184510

Centisome position: 81.33

GC content: 35.5

Gene sequence:

>1107_bases
GTGGAAGGCTGGTTGATAGGCGAAGACGGACGTTCTGGAATTAAAGGAATCGTGGTGGATAAATCGTCTAACATAGCAGG
CATGGCTGCATTAAATGGAGTATTTAGCAGTATAGCTAAGTTTCTGCAATCTAAGGCTATTAAACCTGATATGCTACCAA
CTTTAAACCTAGTAGCTGGAGGTCAGCAACAACAAGAGTTTCAGATTGGAGATGCGTTTCAGTCTGGAGCTTACGCTGGA
GCTAGCAATGCTTTTGATAAGCTAGCTGATTTTGCTATAAAACGAGCTGATTCCATGAGCCCACTCATTGTTGTTGCCTC
AGGTAGAGTCATAGATGTTGTATTTAAAAAAGGTTTTGACTTACGTGAGCACAAGAAGAAGCCACATAATTCAACTTATT
CACCATCAACTGGCAATGAAGATGAAAATTTACCAGCTGAAAGTAGCCTTCAAGTATTGATGATTGGTAGTAATAATATA
GAGAATTTTTTAAGCAACTGGCAGTCATATCGTAAAGGAGAGATATTTATTGAGTTAGCAAATAAAAGAACAGAGTTTTT
GCGTGATCAAGCTCAAAAAGTAGGTTCTATAAAGGATGTAGTATTGTTAATTTCAGTTACTATACCTAATTTAAATGCAA
ATATCGATGATATGATTCGCAGACGAGATGCTTTAAAAGATACGTTTAGGTCCATTGGATTAAGCACTGAAAATGTGAAT
GCACAGCAATTATTAAAGTTCCTGAGAGTAGTATTTGGTTGGCCTGAAGAAGAACATTCAAATATTAACCAGTATGAAAT
ATTGTCTGAACAAATTCTAAGTGGAGATTTTTCGTTATTTGAGAATGATGATTGTGTAAATGTAAATGATGATCAAATAT
TTATCAGTCTAGAAGCAAGAAAGAGGCCTGCAGAGTGGAAATTATCTGCTATGGATCTGTTTTTAGGTAATGAAATGCGT
CGTGATGAATATATAAAATCAAATTTCCTGATTCATTTTGGTCTGCAAATTTTACCAAATCAAGCGATGGAAAGGACTGC
AGCCATAACTAAAAGAGAAGCGCTAGAAAGAAATATTAATGCAGGAATGAGTAAATTTTTTTCATGA

Upstream 100 bases:

>100_bases
AAATGCTAGTTTTTACTTTAAAGCTTGTTAAGCTCAGCATCAAGCATATTAAAACTGCTTCAAAGTAAAATTTCATTATG
GAGATATTATTGAAAAGCAG

Downstream 100 bases:

>100_bases
CATGCAACAAGAAGCTGCTGATTTAGCCGGTGTAGTGGCTGCTTTACAGAGCGGTGATAGAAACGATTCAAAATTATTAA
TGATAAGTATACATAAGAAA

Product: putative conjugative transfer protein TraB

Products: NA

Alternate protein names: F Pilus Assembly Protein TraB; Conjugative Transfer Protein TraB; Sex Pilus Assembly Protein; Conjugative Pilus Assembly Protein

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MEGWLIGEDGRSGIKGIVVDKSSNIAGMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAGGQQQQEFQIGDAFQSGAYAG
ASNAFDKLADFAIKRADSMSPLIVVASGRVIDVVFKKGFDLREHKKKPHNSTYSPSTGNEDENLPAESSLQVLMIGSNNI
ENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTENVN
AQQLLKFLRVVFGWPEEEHSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNEMR
RDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMSKFFS

Sequences:

>Translated_368_residues
MEGWLIGEDGRSGIKGIVVDKSSNIAGMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAGGQQQQEFQIGDAFQSGAYAG
ASNAFDKLADFAIKRADSMSPLIVVASGRVIDVVFKKGFDLREHKKKPHNSTYSPSTGNEDENLPAESSLQVLMIGSNNI
ENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTENVN
AQQLLKFLRVVFGWPEEEHSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNEMR
RDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMSKFFS
>Mature_368_residues
MEGWLIGEDGRSGIKGIVVDKSSNIAGMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAGGQQQQEFQIGDAFQSGAYAG
ASNAFDKLADFAIKRADSMSPLIVVASGRVIDVVFKKGFDLREHKKKPHNSTYSPSTGNEDENLPAESSLQVLMIGSNNI
ENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTENVN
AQQLLKFLRVVFGWPEEEHSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNEMR
RDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMSKFFS

Specific function: Involved In F Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41182; Mature: 41182

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGWLIGEDGRSGIKGIVVDKSSNIAGMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAG
CCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
GQQQQEFQIGDAFQSGAYAGASNAFDKLADFAIKRADSMSPLIVVASGRVIDVVFKKGFD
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHCCCC
LREHKKKPHNSTYSPSTGNEDENLPAESSLQVLMIGSNNIENFLSNWQSYRKGEIFIELA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEH
NKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTENVN
HHHHHHHHHHHHHHCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
AQQLLKFLRVVFGWPEEEHSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEAR
HHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECC
KRPAEWKLSAMDLFLGNEMRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNIN
CCCCCHHHHHHHHHHCCHHHHHHHHHHCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHH
AGMSKFFS
HHHHHHCC
>Mature Secondary Structure
MEGWLIGEDGRSGIKGIVVDKSSNIAGMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAG
CCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
GQQQQEFQIGDAFQSGAYAGASNAFDKLADFAIKRADSMSPLIVVASGRVIDVVFKKGFD
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHCCCC
LREHKKKPHNSTYSPSTGNEDENLPAESSLQVLMIGSNNIENFLSNWQSYRKGEIFIELA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEH
NKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTENVN
HHHHHHHHHHHHHHCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
AQQLLKFLRVVFGWPEEEHSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEAR
HHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECC
KRPAEWKLSAMDLFLGNEMRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNIN
CCCCCHHHHHHHHHHCCHHHHHHHHHHCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHH
AGMSKFFS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA