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The map label for this gene is rnpA

Identifier: 189184289

GI number: 189184289

Start: 1411177

End: 1411716

Strand: Reverse

Name: rnpA

Synonym: OTT_1382

Alternate gene names: NA

Gene position: 1411716-1411177 (Counterclockwise)

Preceding gene: 189184290

Following gene: 189184288

Centisome position: 70.27

GC content: 26.67

Gene sequence:

>540_bases
ATGAAGCTTCGTAAAAAGCTTATTATTGATTCACTAAAAAGTAAGGCTGCTTTTACAGCGATCAATAAGTATGGAAAAAA
GTTAGTAAGTAAAAGCTTAATTTTAATATCACACTCACTACAAGATAATTTAAAAGCTCTAGAAACTTATGAAAAAGCTA
AAATAACACAAGAGATGTCTCATATTTTTGCAAGAAAAATTTATTTAGGGCTTAAAGTTAGTAAAAAGTGTGGCCGAACT
GCTGTCATAAGAAATACAATTAAGCGTAGAATAAAGGCTTGTATGAGGCAAATAATTAGTCAATACTTATCTGTGGAAGA
TAATGCCAATACTGTTCTTTGTTCATTATCAACTAATCATAATAACAATAATTATATTGAATCAACTAATAATCGTGACT
TCCACAAACAATCTAATATTATCAAGAAGAATTCATTATTATCTAGGGCATATCTAATTATTCCTCATAAACATCTTATT
AATGTTAGTTATTTAGAACTTAGTAATGAACTTCAAAAATTGTTAAGGTATTTAATATAA

Upstream 100 bases:

>100_bases
AAAAAGAAGGCATGGGTTTATGGAGCGCATGTCTAGTGTAGGAGGTAGGAGAGTGTTAATGAGGCGCCGTATGAAAGGTA
GAAGGGTGTTATCTGCATAA

Downstream 100 bases:

>100_bases
AATACTTGATTCAAAGTTTATTCTACTAATAAATTAGGTAGTCACATTCTAATTTATTAGTAGAAAGGTATTGTATACAG
TTAAACTTTATGGCAGCATA

Product: ribonuclease P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKLRKKLIIDSLKSKAAFTAINKYGKKLVSKSLILISHSLQDNLKALETYEKAKITQEMSHIFARKIYLGLKVSKKCGRT
AVIRNTIKRRIKACMRQIISQYLSVEDNANTVLCSLSTNHNNNNYIESTNNRDFHKQSNIIKKNSLLSRAYLIIPHKHLI
NVSYLELSNELQKLLRYLI

Sequences:

>Translated_179_residues
MKLRKKLIIDSLKSKAAFTAINKYGKKLVSKSLILISHSLQDNLKALETYEKAKITQEMSHIFARKIYLGLKVSKKCGRT
AVIRNTIKRRIKACMRQIISQYLSVEDNANTVLCSLSTNHNNNNYIESTNNRDFHKQSNIIKKNSLLSRAYLIIPHKHLI
NVSYLELSNELQKLLRYLI
>Mature_179_residues
MKLRKKLIIDSLKSKAAFTAINKYGKKLVSKSLILISHSLQDNLKALETYEKAKITQEMSHIFARKIYLGLKVSKKCGRT
AVIRNTIKRRIKACMRQIISQYLSVEDNANTVLCSLSTNHNNNNYIESTNNRDFHKQSNIIKKNSLLSRAYLIIPHKHLI
NVSYLELSNELQKLLRYLI

Specific function: Unknown

COG id: COG0594

COG function: function code J; RNase P protein component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20689; Mature: 20689

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRKKLIIDSLKSKAAFTAINKYGKKLVSKSLILISHSLQDNLKALETYEKAKITQEMS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIFARKIYLGLKVSKKCGRTAVIRNTIKRRIKACMRQIISQYLSVEDNANTVLCSLSTNH
HHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
NNNNYIESTNNRDFHKQSNIIKKNSLLSRAYLIIPHKHLINVSYLELSNELQKLLRYLI
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKLRKKLIIDSLKSKAAFTAINKYGKKLVSKSLILISHSLQDNLKALETYEKAKITQEMS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIFARKIYLGLKVSKKCGRTAVIRNTIKRRIKACMRQIISQYLSVEDNANTVLCSLSTNH
HHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
NNNNYIESTNNRDFHKQSNIIKKNSLLSRAYLIIPHKHLINVSYLELSNELQKLLRYLI
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA